Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:19 (25478): wrapper (7.7.26015): starting
02:51:19 (25478): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:51:19] Arguments: --nthreads 8
[2025-06-03 02:51:19] Threads: 8
[2025-06-03 02:51:19] Checking for CVMFS
[2025-06-03 02:51:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:51:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:51:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:51:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:51:20] 2.11.2.0 4277 31059 96268 146723 3 154 13622326 25165824 4097 130560 0 15222323 99.793 16681472 2079 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:51:20] CVMFS is ok
[2025-06-03 02:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:51:20] Checking for apptainer binary...
[2025-06-03 02:51:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:51:20] Running /usr/bin/apptainer --version
[2025-06-03 02:51:21] apptainer version 1.3.2-1.el7
[2025-06-03 02:51:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:51:22] cg-vwn279.simple-grid.lan
[2025-06-03 02:51:22] apptainer works
[2025-06-03 02:51:22] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:51:22] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:51:22] Starting ATLAS job with PandaID=6677386723
[2025-06-03 02:51:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:56:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:56:31] 2025-06-03 04:35:43,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:56:31] 2025-06-03 04:35:43,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:56:31] 2025-06-03 04:35:43,530 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:56:31] 2025-06-03 04:35:43,531 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 06:56:31] 2025-06-03 04:35:43,533 | INFO     | sum of deviations: -51053843189.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,533 | INFO     | mean x: 1748918602.5
[2025-06-03 06:56:31] 2025-06-03 04:35:43,533 | INFO     | mean y: 2549841.4403669727
[2025-06-03 06:56:31] 2025-06-03 04:35:43,533 | INFO     | -- intersect: 27797075772.742474
[2025-06-03 06:56:31] 2025-06-03 04:35:43,533 | INFO     | intersect: 27797075772.742474
[2025-06-03 06:56:31] 2025-06-03 04:35:43,534 | INFO     | chi2: 2.771227024077395
[2025-06-03 06:56:31] 2025-06-03 04:35:43,534 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,536 | INFO     | sum of deviations: -34511962070.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,536 | INFO     | mean x: 1748918450.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,536 | INFO     | mean y: 2561331.079812207
[2025-06-03 06:56:31] 2025-06-03 04:35:43,536 | INFO     | -- intersect: 20145904337.10184
[2025-06-03 06:56:31] 2025-06-03 04:35:43,536 | INFO     | intersect: 20145904337.10184
[2025-06-03 06:56:31] 2025-06-03 04:35:43,537 | INFO     | chi2: 2.0076215405210123
[2025-06-03 06:56:31] 2025-06-03 04:35:43,537 | INFO     | current chi2=2.0076215405210123 (change=27.554779053535118 %)
[2025-06-03 06:56:31] 2025-06-03 04:35:43,537 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,539 | INFO     | sum of deviations: -32607535604.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,539 | INFO     | mean x: 1748918297.5
[2025-06-03 06:56:31] 2025-06-03 04:35:43,539 | INFO     | mean y: 2562740.4423076925
[2025-06-03 06:56:31] 2025-06-03 04:35:43,539 | INFO     | -- intersect: 20440125709.81387
[2025-06-03 06:56:31] 2025-06-03 04:35:43,539 | INFO     | intersect: 20440125709.81387
[2025-06-03 06:56:31] 2025-06-03 04:35:43,540 | INFO     | chi2: 2.006461240321677
[2025-06-03 06:56:31] 2025-06-03 04:35:43,540 | INFO     | current chi2=2.006461240321677 (change=0.057794767385993484 %)
[2025-06-03 06:56:31] 2025-06-03 04:35:43,540 | INFO     | right removable region: 207
[2025-06-03 06:56:31] 2025-06-03 04:35:43,549 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,551 | INFO     | sum of deviations: -90825395510.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,551 | INFO     | mean x: 1748918755.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,551 | INFO     | mean y: 2577687.056338028
[2025-06-03 06:56:31] 2025-06-03 04:35:43,551 | INFO     | -- intersect: 53013977350.81259
[2025-06-03 06:56:31] 2025-06-03 04:35:43,552 | INFO     | intersect: 53013977350.81259
[2025-06-03 06:56:31] 2025-06-03 04:35:43,552 | INFO     | chi2: 1.0330609501856798
[2025-06-03 06:56:31] 2025-06-03 04:35:43,552 | INFO     | current chi2=1.0330609501856798 (change=62.721893904393866 %)
[2025-06-03 06:56:31] 2025-06-03 04:35:43,553 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,554 | INFO     | sum of deviations: -92491646469.50003
[2025-06-03 06:56:31] 2025-06-03 04:35:43,555 | INFO     | mean x: 1748918907.5
[2025-06-03 06:56:31] 2025-06-03 04:35:43,555 | INFO     | mean y: 2578882.610576923
[2025-06-03 06:56:31] 2025-06-03 04:35:43,555 | INFO     | -- intersect: 57973979454.90097
[2025-06-03 06:56:31] 2025-06-03 04:35:43,555 | INFO     | intersect: 57973979454.90097
[2025-06-03 06:56:31] 2025-06-03 04:35:43,555 | INFO     | chi2: 0.9865639641550705
[2025-06-03 06:56:31] 2025-06-03 04:35:43,556 | INFO     | current chi2=0.9865639641550705 (change=4.500894746070114 %)
[2025-06-03 06:56:31] 2025-06-03 04:35:43,556 | INFO     | left removable region: 20
[2025-06-03 06:56:31] 2025-06-03 04:35:43,556 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,575 | INFO     | sum of deviations: -64106058146.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,575 | INFO     | mean x: 1748918877.0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,575 | INFO     | mean y: 2586899.695187166
[2025-06-03 06:56:31] 2025-06-03 04:35:43,575 | INFO     | -- intersect: 55296574968.31958
[2025-06-03 06:56:31] 2025-06-03 04:35:43,576 | INFO     | intersect: 55296574968.31958
[2025-06-03 06:56:31] 2025-06-03 04:35:43,576 | INFO     | chi2: 0.18341802440113777
[2025-06-03 06:56:31] 2025-06-03 04:35:43,576 | INFO     | -- intersect: 55296574968.31958
[2025-06-03 06:56:31] 2025-06-03 04:35:43,576 | INFO     | current memory leak: -31.62 B/s (using 187 data points, chi2=0.18)
[2025-06-03 06:56:31] 2025-06-03 04:35:43,577 | INFO     | ..............................
[2025-06-03 06:56:31] 2025-06-03 04:35:43,577 | INFO     | . Timing measurements:
[2025-06-03 06:56:31] 2025-06-03 04:35:43,577 | INFO     | . get job = 0 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,577 | INFO     | . initial setup = 2 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,578 | INFO     | . payload setup = 16 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,578 | INFO     | . stage-in = 0 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,578 | INFO     | . payload execution = 13301 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,578 | INFO     | . stage-out = 4 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,578 | INFO     | . log creation = 1 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,578 | INFO     | ..............................
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | 
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | job summary report
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | --------------------------------------------------
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | PanDA job id: 6677386723
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | task id: 45006595
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | errors: (none)
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:56:31] 2025-06-03 04:35:43,773 | INFO     | pilot state: finished 
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | transexitcode: 0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | exeerrorcode: 0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | exeerrordiag: 
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | exitcode: 0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | exitmsg: OK
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | cpuconsumptiontime: 49598 s
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | nevents: 400
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | neventsw: 0
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | pid: 11764
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | pgrp: 11764
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | corecount: 8
[2025-06-03 06:56:31] 2025-06-03 04:35:43,774 | INFO     | event service: False
[2025-06-03 06:56:31] 2025-06-03 04:35:43,775 | INFO     | sizes: {0: 2405178, 1: 2405178, 11: 2405440, 13321: 2435074, 13322: 2435073, 13327: 2444256, 13412: 2444370}
[2025-06-03 06:56:31] 2025-06-03 04:35:43,775 | INFO     | --------------------------------------------------
[2025-06-03 06:56:31] 2025-06-03 04:35:43,775 | INFO     | 
[2025-06-03 06:56:31] 2025-06-03 04:35:43,775 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-03 06:56:31] 2025-06-03 04:35:44,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,332 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | job 6677386723 has completed (purged errors)
[2025-06-03 06:56:31] 2025-06-03 04:35:44,334 | INFO     | overall cleanup function is called
[2025-06-03 06:56:31] 2025-06-03 04:35:45,343 | INFO     | --- collectZombieJob: --- 10, [11764]
[2025-06-03 06:56:31] 2025-06-03 04:35:45,344 | INFO     | zombie collector waiting for pid 11764
[2025-06-03 06:56:31] 2025-06-03 04:35:45,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:56:31] 2025-06-03 04:35:45,344 | INFO     | collected zombie processes
[2025-06-03 06:56:31] 2025-06-03 04:35:45,344 | INFO     | will attempt to kill all subprocesses of pid=11764
[2025-06-03 06:56:31] 2025-06-03 04:35:45,490 | INFO     | process IDs to be killed: [11764] (in reverse order)
[2025-06-03 06:56:31] 2025-06-03 04:35:45,831 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:56:31] 2025-06-03 04:35:45,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:56:31] 2025-06-03 04:35:45,835 | INFO     | did not find any defunct processes belonging to 11764
[2025-06-03 06:56:31] 2025-06-03 04:35:45,838 | INFO     | did not find any defunct processes belonging to 11764
[2025-06-03 06:56:31] 2025-06-03 04:35:45,839 | INFO     | ready for new job
[2025-06-03 06:56:31] 2025-06-03 04:35:45,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:56:31] 2025-06-03 04:35:45,841 | INFO     | **************************************
[2025-06-03 06:56:31] 2025-06-03 04:35:45,841 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:56:31] 2025-06-03 04:35:45,841 | INFO     | **************************************
[2025-06-03 06:56:31] 2025-06-03 04:35:45,841 | INFO     | 
[2025-06-03 06:56:31] 2025-06-03 04:35:45,850 | INFO     | pilot is running in a VM
[2025-06-03 06:56:31] 2025-06-03 04:35:45,850 | INFO     | architecture information:
[2025-06-03 06:56:31] 2025-06-03 04:35:45,858 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:56:31] 2025-06-03 04:35:45,978 | INFO     | cat /etc/os-release:
[2025-06-03 06:56:31] NAME="CentOS Linux"
[2025-06-03 06:56:31] VERSION="7 (Core)"
[2025-06-03 06:56:31] ID="centos"
[2025-06-03 06:56:31] ID_LIKE="rhel fedora"
[2025-06-03 06:56:31] VERSION_ID="7"
[2025-06-03 06:56:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:56:31] ANSI_COLOR="0;31"
[2025-06-03 06:56:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:56:31] HOME_URL="https://www.centos.org/"
[2025-06-03 06:56:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:56:31] 
[2025-06-03 06:56:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:56:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:56:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:56:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:56:31] 
[2025-06-03 06:56:31] 2025-06-03 04:35:45,979 | INFO     | **************************************
[2025-06-03 06:56:31] 2025-06-03 04:35:46,482 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-03 06:56:31] 2025-06-03 04:35:46,594 | INFO     | sufficient remaining disk space (496872980480 B)
[2025-06-03 06:56:31] 2025-06-03 04:35:46,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:56:31] 2025-06-03 04:35:46,595 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:56:31] 2025-06-03 04:35:46,595 | INFO     | update_server=False
[2025-06-03 06:56:31] 2025-06-03 04:35:46,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:56:31] 2025-06-03 04:35:46,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:56:31] 2025-06-03 04:35:46,602 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 06:56:31] 2025-06-03 04:35:46,603 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 06:56:31] 2025-06-03 04:35:46,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:56:31] 2025-06-03 04:35:46,603 | INFO     | will abort loop
[2025-06-03 06:56:31] 2025-06-03 04:35:47,111 | INFO     | all job control threads have been joined
[2025-06-03 06:56:31] 2025-06-03 04:35:47,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:56:31] 2025-06-03 04:35:47,430 | INFO     | all data control threads have been joined
[2025-06-03 06:56:31] 2025-06-03 04:35:47,601 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:47,609 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:47,644 | INFO     | all payload control threads have been joined
[2025-06-03 06:56:31] 2025-06-03 04:35:47,657 | INFO     | PID=542 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-06-03 06:56:31] 2025-06-03 04:35:47,657 | INFO     | .. there are 9 such processes running
[2025-06-03 06:56:31] 2025-06-03 04:35:47,658 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:56:31] 2025-06-03 04:35:47,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:56:31] 2025-06-03 04:35:47,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:56:31] 2025-06-03 04:35:47,731 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:47,755 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:47,825 | INFO     | [job] validate thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:47,890 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:47,994 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:48,093 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:48,118 | INFO     | [job] control thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:48,436 | INFO     | [data] control thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:48,650 | INFO     | [payload] control thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:48,682 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:48,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:56:31] 2025-06-03 04:35:48,924 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:49,175 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:49,793 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:50,607 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:56:31] 2025-06-03 04:35:50,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166477182784)>', '<ExcThread(monitor, started 140166022805248)>']
[2025-06-03 06:56:31] 2025-06-03 04:35:51,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:56:31] 2025-06-03 04:35:51,681 | INFO     | [monitor] control thread has ended
[2025-06-03 06:56:31] 2025-06-03 04:35:55,731 | INFO     | all workflow threads have been joined
[2025-06-03 06:56:31] 2025-06-03 04:35:55,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:56:31] 2025-06-03 04:35:55,731 | INFO     | traces error code: 0
[2025-06-03 06:56:31] 2025-06-03 04:35:55,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:56:31] 2025-06-03 04:35:56,066 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:56:31] 2025-06-03 04:35:56,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:56:31] 2025-06-03 04:35:56,222 [wrapper] pilotpid: 542
[2025-06-03 06:56:31] 2025-06-03 04:35:56,261 [wrapper] Pilot exit status: 0
[2025-06-03 06:56:31] 2025-06-03 04:35:56,577 [wrapper] pandaids: 6677386723
[2025-06-03 06:56:31] 2025-06-03 04:35:57,530 [wrapper] cleanup supervisor_pilot 12216 543
[2025-06-03 06:56:31] 2025-06-03 04:35:57,578 [wrapper] Test setup, not cleaning
[2025-06-03 06:56:31] 2025-06-03 04:35:57,683 [wrapper] apfmon messages muted
[2025-06-03 06:56:31] 2025-06-03 04:35:57,774 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:56:31] 2025-06-03 04:35:57,867 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:56:31]  *** Error codes and diagnostics ***
[2025-06-03 06:56:31]     "exeErrorCode": 0,
[2025-06-03 06:56:31]     "exeErrorDiag": "",
[2025-06-03 06:56:31]     "pilotErrorCode": 0,
[2025-06-03 06:56:31]     "pilotErrorDiag": "",
[2025-06-03 06:56:31]  *** Listing of results directory ***
[2025-06-03 06:56:31] total 395752
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:16 queuedata.json
[2025-06-03 06:56:31] -rwx------. 1 boinc boinc     37140 Jun  2 19:17 runpilot2-wrapper.sh
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:56:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:51 run_atlas
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:51 job.xml
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc      6392 Jun  3 02:51 init_data.xml
[2025-06-03 06:56:31] -rw-r--r--. 2 boinc boinc 218036508 Jun  3 02:51 EVNT.45006593._000207.pool.root.1
[2025-06-03 06:56:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:51 start_atlas.sh
[2025-06-03 06:56:31] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:51 shared
[2025-06-03 06:56:31] -rw-r--r--. 2 boinc boinc    508875 Jun  3 02:51 input.tar.gz
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:51 boinc_lockfile
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc      2521 Jun  3 02:51 pandaJob.out
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc    988081 Jun  3 02:51 agis_schedconf.cvmfs.json
[2025-06-03 06:56:31] drwx------. 4 boinc boinc      4096 Jun  3 02:51 pilot3
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc 180291932 Jun  3 06:32 HITS.45006595._005165.pool.root.1
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc       531 Jun  3 06:33 boinc_task_state.xml
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc      1018 Jun  3 06:34 memory_monitor_summary.json
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc   1603667 Jun  3 06:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc    381037 Jun  3 06:34 log.45006595._005165.job.log.tgz.1
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc        95 Jun  3 06:34 pilot_heartbeat.json
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc      7687 Jun  3 06:35 heartbeat.json
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc      4993 Jun  3 06:35 pilotlog.txt
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc   1165833 Jun  3 06:35 log.45006595._005165.job.log.1
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc       357 Jun  3 06:35 output.list
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:35 runtime_log
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc   1566720 Jun  3 06:35 result.tar.gz
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc      8673 Jun  3 06:36 runtime_log.err
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc       656 Jun  3 06:36 IxQMDm0xNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZgfKDmQvIWnn.diag
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:56 boinc_mmap_file
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:56 wrapper_checkpoint.txt
[2025-06-03 06:56:31] -rw-r--r--. 1 boinc boinc     20539 Jun  3 06:56 stderr.txt
[2025-06-03 06:56:31] HITS file was successfully produced:
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc 180291932 Jun  3 06:32 shared/HITS.pool.root.1
[2025-06-03 06:56:31]  *** Contents of shared directory: ***
[2025-06-03 06:56:31] total 391044
[2025-06-03 06:56:31] -rw-r--r--. 2 boinc boinc 218036508 Jun  3 02:51 ATLAS.root_0
[2025-06-03 06:56:31] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:51 start_atlas.sh
[2025-06-03 06:56:31] -rw-r--r--. 2 boinc boinc    508875 Jun  3 02:51 input.tar.gz
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc 180291932 Jun  3 06:32 HITS.pool.root.1
[2025-06-03 06:56:31] -rw-------. 1 boinc boinc   1566720 Jun  3 06:35 result.tar.gz
06:56:33 (25478): run_atlas exited; CPU time 49759.033525
06:56:33 (25478): called boinc_finish(0)

</stderr_txt>
]]>

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