Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:03:07 (5070): wrapper (7.7.26015): starting
05:03:07 (5070): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:03:07] Arguments: --nthreads 8
[2025-06-03 05:03:07] Threads: 8
[2025-06-03 05:03:07] Checking for CVMFS
[2025-06-03 05:03:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:03:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:03:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:03:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:03:09] 2.11.2.0 8404 31369 95712 146724 3 59 14030573 25165824 4632 130560 0 16159362 99.845 17254652 4557 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:03:09] CVMFS is ok
[2025-06-03 05:03:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:03:09] Checking for apptainer binary...
[2025-06-03 05:03:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:03:09] Running /usr/bin/apptainer --version
[2025-06-03 05:03:09] apptainer version 1.3.2-1.el7
[2025-06-03 05:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:03:53] cg-vwn309.simple-grid.lan
[2025-06-03 05:03:53] apptainer works
[2025-06-03 05:03:53] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:03:53] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:03:53] Starting ATLAS job with PandaID=6677386715
[2025-06-03 05:03:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:31:52]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:31:52] 2025-06-03 07:02:01,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:31:52] 2025-06-03 07:02:01,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:31:52] 2025-06-03 07:02:01,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:31:52] 2025-06-03 07:02:01,742 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:31:52] 2025-06-03 07:02:01,743 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 10:31:52] 2025-06-03 07:02:01,745 | INFO     | sum of deviations: 63164312238.50002
[2025-06-03 10:31:52] 2025-06-03 07:02:01,745 | INFO     | mean x: 1748927247.5
[2025-06-03 10:31:52] 2025-06-03 07:02:01,745 | INFO     | mean y: 2448980.436936937
[2025-06-03 10:31:52] 2025-06-03 07:02:01,745 | INFO     | -- intersect: -32559844067.92623
[2025-06-03 10:31:52] 2025-06-03 07:02:01,745 | INFO     | intersect: -32559844067.92623
[2025-06-03 10:31:52] 2025-06-03 07:02:01,746 | INFO     | chi2: 8.225468286837922
[2025-06-03 10:31:52] 2025-06-03 07:02:01,746 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,748 | INFO     | sum of deviations: 76752176705.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,748 | INFO     | mean x: 1748927095.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,748 | INFO     | mean y: 2458044.6405529953
[2025-06-03 10:31:52] 2025-06-03 07:02:01,748 | INFO     | -- intersect: -42363204681.08172
[2025-06-03 10:31:52] 2025-06-03 07:02:01,748 | INFO     | intersect: -42363204681.08172
[2025-06-03 10:31:52] 2025-06-03 07:02:01,748 | INFO     | chi2: 7.5374532739893105
[2025-06-03 10:31:52] 2025-06-03 07:02:01,749 | INFO     | current chi2=7.5374532739893105 (change=8.364447942125633 %)
[2025-06-03 10:31:52] 2025-06-03 07:02:01,749 | INFO     | right removable region: 216
[2025-06-03 10:31:52] 2025-06-03 07:02:01,749 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,751 | INFO     | sum of deviations: -14744510873.000008
[2025-06-03 10:31:52] 2025-06-03 07:02:01,751 | INFO     | mean x: 1748927400.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,751 | INFO     | mean y: 2501957.460829493
[2025-06-03 10:31:52] 2025-06-03 07:02:01,751 | INFO     | -- intersect: 8141177763.861009
[2025-06-03 10:31:52] 2025-06-03 07:02:01,751 | INFO     | intersect: 8141177763.861009
[2025-06-03 10:31:52] 2025-06-03 07:02:01,752 | INFO     | chi2: 3.1042763491629843
[2025-06-03 10:31:52] 2025-06-03 07:02:01,752 | INFO     | current chi2=3.1042763491629843 (change=62.26018700807189 %)
[2025-06-03 10:31:52] 2025-06-03 07:02:01,752 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,754 | INFO     | sum of deviations: -63039633545.49999
[2025-06-03 10:31:52] 2025-06-03 07:02:01,754 | INFO     | mean x: 1748927552.5
[2025-06-03 10:31:52] 2025-06-03 07:02:01,754 | INFO     | mean y: 2536220.0424528304
[2025-06-03 10:31:52] 2025-06-03 07:02:01,754 | INFO     | -- intersect: 37319745309.90865
[2025-06-03 10:31:52] 2025-06-03 07:02:01,754 | INFO     | intersect: 37319745309.90865
[2025-06-03 10:31:52] 2025-06-03 07:02:01,754 | INFO     | chi2: 1.0259071488673168
[2025-06-03 10:31:52] 2025-06-03 07:02:01,755 | INFO     | current chi2=1.0259071488673168 (change=66.95180990751885 %)
[2025-06-03 10:31:52] 2025-06-03 07:02:01,755 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,756 | INFO     | sum of deviations: -66315012471.99999
[2025-06-03 10:31:52] 2025-06-03 07:02:01,757 | INFO     | mean x: 1748927705.0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,757 | INFO     | mean y: 2538608.801932367
[2025-06-03 10:31:52] 2025-06-03 07:02:01,757 | INFO     | -- intersect: 42172615064.13466
[2025-06-03 10:31:52] 2025-06-03 07:02:01,757 | INFO     | intersect: 42172615064.13466
[2025-06-03 10:31:52] 2025-06-03 07:02:01,757 | INFO     | chi2: 0.9671122881989132
[2025-06-03 10:31:52] 2025-06-03 07:02:01,757 | INFO     | current chi2=0.9671122881989132 (change=5.731011888679973 %)
[2025-06-03 10:31:52] 2025-06-03 07:02:01,758 | INFO     | left removable region: 30
[2025-06-03 10:31:52] 2025-06-03 07:02:01,758 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 10:31:52] 2025-06-03 07:02:01,759 | INFO     | sum of deviations: -33251604439.499992
[2025-06-03 10:31:52] 2025-06-03 07:02:01,759 | INFO     | mean x: 1748927979.5
[2025-06-03 10:31:52] 2025-06-03 07:02:01,760 | INFO     | mean y: 2535669.370967742
[2025-06-03 10:31:52] 2025-06-03 07:02:01,760 | INFO     | -- intersect: 29148593887.813786
[2025-06-03 10:31:52] 2025-06-03 07:02:01,760 | INFO     | intersect: 29148593887.813786
[2025-06-03 10:31:52] 2025-06-03 07:02:01,760 | INFO     | chi2: 0.15525997883643244
[2025-06-03 10:31:52] 2025-06-03 07:02:01,760 | INFO     | -- intersect: 29148593887.813786
[2025-06-03 10:31:52] 2025-06-03 07:02:01,760 | INFO     | current memory leak: -16.67 B/s (using 186 data points, chi2=0.16)
[2025-06-03 10:31:52] 2025-06-03 07:02:01,761 | INFO     | ..............................
[2025-06-03 10:31:52] 2025-06-03 07:02:01,761 | INFO     | . Timing measurements:
[2025-06-03 10:31:52] 2025-06-03 07:02:01,761 | INFO     | . get job = 0 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,761 | INFO     | . initial setup = 9 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,762 | INFO     | . payload setup = 144 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,762 | INFO     | . stage-in = 0 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,762 | INFO     | . payload execution = 13677 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,762 | INFO     | . stage-out = 4 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,762 | INFO     | . log creation = 1 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,762 | INFO     | ..............................
[2025-06-03 10:31:52] 2025-06-03 07:02:01,925 | INFO     | 
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | job summary report
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | --------------------------------------------------
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | PanDA job id: 6677386715
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | task id: 45006595
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | errors: (none)
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | pilot state: finished 
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | transexitcode: 0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | exeerrorcode: 0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | exeerrordiag: 
[2025-06-03 10:31:52] 2025-06-03 07:02:01,926 | INFO     | exitcode: 0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | exitmsg: OK
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | cpuconsumptiontime: 49723 s
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | nevents: 400
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | neventsw: 0
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | pid: 21285
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | pgrp: 21285
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | corecount: 8
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | event service: False
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | sizes: {0: 2404900, 1: 2405155, 12: 2405155, 23: 2405183, 34: 2405211, 44: 2405239, 55: 2405395, 66: 2405423, 77: 2405451, 87: 2405507, 90: 2405741, 98: 2406049, 1
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | --------------------------------------------------
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | 
[2025-06-03 10:31:52] 2025-06-03 07:02:01,927 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-03 10:31:52] 2025-06-03 07:02:02,453 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,453 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,453 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,453 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,455 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:31:52] 2025-06-03 07:02:02,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:31:52] 2025-06-03 07:02:02,455 | INFO     | job 6677386715 has completed (purged errors)
[2025-06-03 10:31:52] 2025-06-03 07:02:02,455 | INFO     | overall cleanup function is called
[2025-06-03 10:31:52] 2025-06-03 07:02:03,464 | INFO     | --- collectZombieJob: --- 10, [21285]
[2025-06-03 10:31:52] 2025-06-03 07:02:03,465 | INFO     | zombie collector waiting for pid 21285
[2025-06-03 10:31:52] 2025-06-03 07:02:03,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:31:52] 2025-06-03 07:02:03,465 | INFO     | collected zombie processes
[2025-06-03 10:31:52] 2025-06-03 07:02:03,465 | INFO     | will attempt to kill all subprocesses of pid=21285
[2025-06-03 10:31:52] 2025-06-03 07:02:03,582 | INFO     | process IDs to be killed: [21285] (in reverse order)
[2025-06-03 10:31:52] 2025-06-03 07:02:04,425 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:31:52] 2025-06-03 07:02:04,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:31:52] 2025-06-03 07:02:04,433 | INFO     | did not find any defunct processes belonging to 21285
[2025-06-03 10:31:52] 2025-06-03 07:02:04,436 | INFO     | did not find any defunct processes belonging to 21285
[2025-06-03 10:31:52] 2025-06-03 07:02:04,437 | INFO     | ready for new job
[2025-06-03 10:31:52] 2025-06-03 07:02:04,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:31:52] 2025-06-03 07:02:04,439 | INFO     | **************************************
[2025-06-03 10:31:52] 2025-06-03 07:02:04,439 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:31:52] 2025-06-03 07:02:04,439 | INFO     | **************************************
[2025-06-03 10:31:52] 2025-06-03 07:02:04,439 | INFO     | 
[2025-06-03 10:31:52] 2025-06-03 07:02:04,440 | INFO     | pilot is running in a VM
[2025-06-03 10:31:52] 2025-06-03 07:02:04,440 | INFO     | architecture information:
[2025-06-03 10:31:52] 2025-06-03 07:02:04,454 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:31:52] 2025-06-03 07:02:04,748 | INFO     | cat /etc/os-release:
[2025-06-03 10:31:52] NAME="CentOS Linux"
[2025-06-03 10:31:52] VERSION="7 (Core)"
[2025-06-03 10:31:52] ID="centos"
[2025-06-03 10:31:52] ID_LIKE="rhel fedora"
[2025-06-03 10:31:52] VERSION_ID="7"
[2025-06-03 10:31:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:31:52] ANSI_COLOR="0;31"
[2025-06-03 10:31:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:31:52] HOME_URL="https://www.centos.org/"
[2025-06-03 10:31:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:31:52] 
[2025-06-03 10:31:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:31:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:31:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:31:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:31:52] 
[2025-06-03 10:31:52] 2025-06-03 07:02:04,749 | INFO     | **************************************
[2025-06-03 10:31:52] 2025-06-03 07:02:05,252 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-03 10:31:52] 2025-06-03 07:02:05,475 | INFO     | sufficient remaining disk space (496909680640 B)
[2025-06-03 10:31:52] 2025-06-03 07:02:05,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:31:52] 2025-06-03 07:02:05,476 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:31:52] 2025-06-03 07:02:05,476 | INFO     | update_server=False
[2025-06-03 10:31:52] 2025-06-03 07:02:05,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:31:52] 2025-06-03 07:02:05,476 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:31:52] 2025-06-03 07:02:05,477 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:31:52] 2025-06-03 07:02:05,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:31:52] 2025-06-03 07:02:05,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:31:52] 2025-06-03 07:02:05,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:31:52] 2025-06-03 07:02:05,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:31:52] 2025-06-03 07:02:05,575 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:31:52] 2025-06-03 07:02:05,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:31:52] 2025-06-03 07:02:05,575 | INFO     | will abort loop
[2025-06-03 10:31:52] 2025-06-03 07:02:05,884 | INFO     | all payload control threads have been joined
[2025-06-03 10:31:52] 2025-06-03 07:02:06,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:31:52] 2025-06-03 07:02:06,226 | INFO     | all job control threads have been joined
[2025-06-03 10:31:52] 2025-06-03 07:02:06,483 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:06,546 | INFO     | all data control threads have been joined
[2025-06-03 10:31:52] 2025-06-03 07:02:06,581 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:06,613 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:06,736 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:06,890 | INFO     | [payload] control thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:06,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:31:52] 2025-06-03 07:02:06,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,232 | INFO     | [job] control thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,419 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,422 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,487 | INFO     | [job] validate thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,552 | INFO     | [data] control thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,700 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,731 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:07,947 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:08,109 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:09,496 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:31:52] 2025-06-03 07:02:09,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140207318386496)>', '<ExcThread(monitor, started 140206573344512)>']
[2025-06-03 10:31:52] 2025-06-03 07:02:10,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:31:52] 2025-06-03 07:02:10,507 | INFO     | [monitor] control thread has ended
[2025-06-03 10:31:52] 2025-06-03 07:02:14,576 | INFO     | all workflow threads have been joined
[2025-06-03 10:31:52] 2025-06-03 07:02:14,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:31:52] 2025-06-03 07:02:14,577 | INFO     | traces error code: 0
[2025-06-03 10:31:52] 2025-06-03 07:02:14,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:31:52] 2025-06-03 07:02:14,999 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:31:52] 2025-06-03 07:02:15,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:31:52] 2025-06-03 07:02:15,186 [wrapper] pilotpid: 14194
[2025-06-03 10:31:52] 2025-06-03 07:02:15,298 [wrapper] Pilot exit status: 0
[2025-06-03 10:31:52] 2025-06-03 07:02:15,532 [wrapper] pandaids: 6677386715
[2025-06-03 10:31:52] 2025-06-03 07:02:16,216 [wrapper] cleanup supervisor_pilot 16542 14195
[2025-06-03 10:31:52] 2025-06-03 07:02:16,285 [wrapper] Test setup, not cleaning
[2025-06-03 10:31:52] 2025-06-03 07:02:16,346 [wrapper] apfmon messages muted
[2025-06-03 10:31:52] 2025-06-03 07:02:16,401 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:31:52] 2025-06-03 07:02:16,493 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:31:52]  *** Error codes and diagnostics ***
[2025-06-03 10:31:52]     "exeErrorCode": 0,
[2025-06-03 10:31:52]     "exeErrorDiag": "",
[2025-06-03 10:31:52]     "pilotErrorCode": 0,
[2025-06-03 10:31:52]     "pilotErrorDiag": "",
[2025-06-03 10:31:52]  *** Listing of results directory ***
[2025-06-03 10:31:52] total 396448
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-03 10:31:52] -rwx------. 1 boinc boinc     37140 Jun  2 19:16 runpilot2-wrapper.sh
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:16 queuedata.json
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc       100 Jun  3 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:31:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 05:03 run_atlas
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc       105 Jun  3 05:03 job.xml
[2025-06-03 10:31:52] -rw-r--r--. 2 boinc boinc 218036508 Jun  3 05:03 EVNT.45006593._000207.pool.root.1
[2025-06-03 10:31:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:03 start_atlas.sh
[2025-06-03 10:31:52] drwxrwx--x. 2 boinc boinc        68 Jun  3 05:03 shared
[2025-06-03 10:31:52] -rw-r--r--. 2 boinc boinc    508877 Jun  3 05:03 input.tar.gz
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc      6392 Jun  3 05:03 init_data.xml
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc         0 Jun  3 05:03 boinc_lockfile
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc      2520 Jun  3 05:03 pandaJob.out
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc    988073 Jun  3 05:06 agis_schedconf.cvmfs.json
[2025-06-03 10:31:52] drwx------. 4 boinc boinc      4096 Jun  3 05:06 pilot3
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc 180947811 Jun  3 08:59 HITS.45006595._005157.pool.root.1
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc       531 Jun  3 08:59 boinc_task_state.xml
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc      1016 Jun  3 09:00 memory_monitor_summary.json
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc   1603667 Jun  3 09:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc    374465 Jun  3 09:00 log.45006595._005157.job.log.tgz.1
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc        95 Jun  3 09:01 pilot_heartbeat.json
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc      7689 Jun  3 09:02 heartbeat.json
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc      4726 Jun  3 09:02 pilotlog.txt
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc   1203542 Jun  3 09:02 log.45006595._005157.job.log.1
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc       357 Jun  3 09:02 output.list
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:02 runtime_log
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc   1597440 Jun  3 09:02 result.tar.gz
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc       656 Jun  3 09:02 WoxNDmewNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXvVKDmVGjTlm.diag
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc      8673 Jun  3 09:02 runtime_log.err
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:31 boinc_mmap_file
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:31 wrapper_checkpoint.txt
[2025-06-03 10:31:52] -rw-r--r--. 1 boinc boinc     20538 Jun  3 10:31 stderr.txt
[2025-06-03 10:31:52] HITS file was successfully produced:
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc 180947811 Jun  3 08:59 shared/HITS.pool.root.1
[2025-06-03 10:31:52]  *** Contents of shared directory: ***
[2025-06-03 10:31:52] total 391712
[2025-06-03 10:31:52] -rw-r--r--. 2 boinc boinc 218036508 Jun  3 05:03 ATLAS.root_0
[2025-06-03 10:31:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:03 start_atlas.sh
[2025-06-03 10:31:52] -rw-r--r--. 2 boinc boinc    508877 Jun  3 05:03 input.tar.gz
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc 180947811 Jun  3 08:59 HITS.pool.root.1
[2025-06-03 10:31:52] -rw-------. 1 boinc boinc   1597440 Jun  3 09:02 result.tar.gz
10:31:54 (5070): run_atlas exited; CPU time 49909.191475
10:31:54 (5070): called boinc_finish(0)

</stderr_txt>
]]>

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