Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:21 (76974): wrapper (7.7.26015): starting
14:26:21 (76974): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 14:26:21] Arguments: --nthreads 4
[2025-06-03 14:26:21] Threads: 4
[2025-06-03 14:26:21] Checking for CVMFS
[2025-06-03 14:26:21] No cvmfs_config command found, will try listing directly
[2025-06-03 14:26:21] CVMFS is ok
[2025-06-03 14:26:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:26:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:26:21] Further information can be found at the LHC@home message board.
[2025-06-03 14:26:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:26:21] Checking for apptainer binary...
[2025-06-03 14:26:21] which: no apptainer in ((null))
[2025-06-03 14:26:21] apptainer is not installed, using version from CVMFS
[2025-06-03 14:26:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:26:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-06-03 14:26:21] apptainer works
[2025-06-03 14:26:21] Set ATHENA_PROC_NUMBER=4
[2025-06-03 14:26:21] Set ATHENA_CORE_NUMBER=4
[2025-06-03 14:26:21] Starting ATLAS job with PandaID=6677386628
[2025-06-03 14:26:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:53:15]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:53:15] 2025-06-03 15:51:14,415 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 17:53:15] 2025-06-03 15:51:14,532 | INFO     | monitor loop #892: job 0:6677386628 is in state 'finished'
[2025-06-03 17:53:15] 2025-06-03 15:51:14,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:53:15] 2025-06-03 15:51:17,035 | INFO     | monitor loop #893: job 0:6677386628 is in state 'finished'
[2025-06-03 17:53:15] 2025-06-03 15:51:17,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:53:15] 2025-06-03 15:51:19,538 | INFO     | monitor loop #894: job 0:6677386628 is in state 'finished'
[2025-06-03 17:53:15] 2025-06-03 15:51:19,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,196 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:53:15] 2025-06-03 15:51:21,196 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677386628/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,197 | INFO     | extracted standard info from prmon json
[2025-06-03 17:53:15] 2025-06-03 15:51:21,197 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:53:15] 2025-06-03 15:51:21,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:53:15] 2025-06-03 15:51:21,198 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:53:15] 2025-06-03 15:51:21,198 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:53:15] 2025-06-03 15:51:21,203 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:53:15] 2025-06-03 15:51:21,203 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,205 | INFO     | sum of deviations: 7493155270.999993
[2025-06-03 17:53:15] 2025-06-03 15:51:21,205 | INFO     | mean x: 1748959717.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,205 | INFO     | mean y: 2339507.895522388
[2025-06-03 17:53:15] 2025-06-03 15:51:21,205 | INFO     | -- intersect: -5202276488.519891
[2025-06-03 17:53:15] 2025-06-03 15:51:21,206 | INFO     | intersect: -5202276488.519891
[2025-06-03 17:53:15] 2025-06-03 15:51:21,206 | INFO     | chi2: 1.7013620524630495
[2025-06-03 17:53:15] 2025-06-03 15:51:21,207 | INFO     | sum of square deviations: 2334722845.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,208 | INFO     | sum of deviations: 7538596854.999998
[2025-06-03 17:53:15] 2025-06-03 15:51:21,208 | INFO     | mean x: 1748959564.5
[2025-06-03 17:53:15] 2025-06-03 15:51:21,208 | INFO     | mean y: 2339545.714285714
[2025-06-03 17:53:15] 2025-06-03 15:51:21,208 | INFO     | -- intersect: -5644883678.531788
[2025-06-03 17:53:15] 2025-06-03 15:51:21,209 | INFO     | intersect: -5644883678.531788
[2025-06-03 17:53:15] 2025-06-03 15:51:21,209 | INFO     | chi2: 1.7023599362380197
[2025-06-03 17:53:15] 2025-06-03 15:51:21,209 | INFO     | current chi2=1.7023599362380197 (change=-0.058652053131524995 %)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,209 | INFO     | right removable region: 195
[2025-06-03 17:53:15] 2025-06-03 15:51:21,210 | INFO     | sum of square deviations: 2334722845.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,211 | INFO     | sum of deviations: -25285621729.000008
[2025-06-03 17:53:15] 2025-06-03 15:51:21,211 | INFO     | mean x: 1748959869.5
[2025-06-03 17:53:15] 2025-06-03 15:51:21,211 | INFO     | mean y: 2366524.397959184
[2025-06-03 17:53:15] 2025-06-03 15:51:21,211 | INFO     | -- intersect: 18944031387.996887
[2025-06-03 17:53:15] 2025-06-03 15:51:21,212 | INFO     | intersect: 18944031387.996887
[2025-06-03 17:53:15] 2025-06-03 15:51:21,212 | INFO     | chi2: 0.057225015865715455
[2025-06-03 17:53:15] 2025-06-03 15:51:21,212 | INFO     | current chi2=0.057225015865715455 (change=96.63651744301742 %)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,213 | INFO     | sum of square deviations: 2160561440.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,214 | INFO     | sum of deviations: -25113741053.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,214 | INFO     | mean x: 1748960022.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,214 | INFO     | mean y: 2366359.0942408377
[2025-06-03 17:53:15] 2025-06-03 15:51:21,215 | INFO     | -- intersect: 20331771619.86627
[2025-06-03 17:53:15] 2025-06-03 15:51:21,215 | INFO     | intersect: 20331771619.86627
[2025-06-03 17:53:15] 2025-06-03 15:51:21,215 | INFO     | chi2: 0.052115208928869054
[2025-06-03 17:53:15] 2025-06-03 15:51:21,215 | INFO     | current chi2=0.052115208928869054 (change=8.929323757353082 %)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,215 | INFO     | left removable region: 20
[2025-06-03 17:53:15] 2025-06-03 15:51:21,216 | INFO     | sum of square deviations: 1661798600.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,217 | INFO     | sum of deviations: -20027872580.000004
[2025-06-03 17:53:15] 2025-06-03 15:51:21,217 | INFO     | mean x: 1748960144.0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,217 | INFO     | mean y: 2363118.1028571427
[2025-06-03 17:53:15] 2025-06-03 15:51:21,217 | INFO     | -- intersect: 21080700114.85472
[2025-06-03 17:53:15] 2025-06-03 15:51:21,218 | INFO     | intersect: 21080700114.85472
[2025-06-03 17:53:15] 2025-06-03 15:51:21,218 | INFO     | chi2: 0.050192750737742854
[2025-06-03 17:53:15] 2025-06-03 15:51:21,218 | INFO     | -- intersect: 21080700114.85472
[2025-06-03 17:53:15] 2025-06-03 15:51:21,219 | INFO     | current memory leak: -12.05 B/s (using 175 data points, chi2=0.05)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,219 | INFO     | ..............................
[2025-06-03 17:53:15] 2025-06-03 15:51:21,219 | INFO     | . Timing measurements:
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | . get job = 0 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | . initial setup = 1 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | . payload setup = 6 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | . stage-in = 0 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | . payload execution = 12253 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | . stage-out = 1 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | . log creation = 0 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,220 | INFO     | ..............................
[2025-06-03 17:53:15] 2025-06-03 15:51:21,350 | INFO     | 
[2025-06-03 17:53:15] 2025-06-03 15:51:21,351 | INFO     | job summary report
[2025-06-03 17:53:15] 2025-06-03 15:51:21,351 | INFO     | --------------------------------------------------
[2025-06-03 17:53:15] 2025-06-03 15:51:21,351 | INFO     | PanDA job id: 6677386628
[2025-06-03 17:53:15] 2025-06-03 15:51:21,351 | INFO     | task id: 45006595
[2025-06-03 17:53:15] 2025-06-03 15:51:21,351 | INFO     | errors: (none)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | pilot state: finished 
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | transexitcode: 0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | exeerrorcode: 0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | exeerrordiag: 
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | exitcode: 0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | exitmsg: OK
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | cpuconsumptiontime: 46848 s
[2025-06-03 17:53:15] 2025-06-03 15:51:21,352 | INFO     | nevents: 400
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | neventsw: 0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | pid: 87817
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | pgrp: 87817
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | corecount: 4
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | event service: False
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | sizes: {0: 2405188, 1: 2405216, 5: 2405422, 11: 2405478, 12264: 2435044, 12265: 2444007, 12267: 2444191, 12275: 2444361}
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | --------------------------------------------------
[2025-06-03 17:53:15] 2025-06-03 15:51:21,353 | INFO     | 
[2025-06-03 17:53:15] 2025-06-03 15:51:21,354 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-03 17:53:15] 2025-06-03 15:51:21,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,376 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:53:15] 2025-06-03 15:51:21,379 | INFO     | job 6677386628 has completed (purged errors)
[2025-06-03 17:53:15] 2025-06-03 15:51:21,379 | INFO     | overall cleanup function is called
[2025-06-03 17:53:15] 2025-06-03 15:51:22,384 | INFO     | --- collectZombieJob: --- 10, [87817]
[2025-06-03 17:53:15] 2025-06-03 15:51:22,384 | INFO     | zombie collector waiting for pid 87817
[2025-06-03 17:53:15] 2025-06-03 15:51:22,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:53:15] 2025-06-03 15:51:22,384 | INFO     | collected zombie processes
[2025-06-03 17:53:15] 2025-06-03 15:51:22,385 | INFO     | will attempt to kill all subprocesses of pid=87817
[2025-06-03 17:53:15] 2025-06-03 15:51:22,709 | INFO     | process IDs to be killed: [87817] (in reverse order)
[2025-06-03 17:53:15] 2025-06-03 15:51:22,810 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:53:15] 2025-06-03 15:51:22,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:53:15] 2025-06-03 15:51:22,819 | INFO     | did not find any defunct processes belonging to 87817
[2025-06-03 17:53:15] 2025-06-03 15:51:22,828 | INFO     | did not find any defunct processes belonging to 87817
[2025-06-03 17:53:15] 2025-06-03 15:51:22,828 | INFO     | ready for new job
[2025-06-03 17:53:15] 2025-06-03 15:51:22,829 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:53:15] 2025-06-03 15:51:22,831 | INFO     | **************************************
[2025-06-03 17:53:15] 2025-06-03 15:51:22,831 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:53:15] 2025-06-03 15:51:22,831 | INFO     | **************************************
[2025-06-03 17:53:15] 2025-06-03 15:51:22,831 | INFO     | 
[2025-06-03 17:53:15] 2025-06-03 15:51:22,833 | INFO     | architecture information:
[2025-06-03 17:53:15] 2025-06-03 15:51:22,834 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:53:15] 2025-06-03 15:51:22,849 | INFO     | cat /etc/os-release:
[2025-06-03 17:53:15] NAME="CentOS Linux"
[2025-06-03 17:53:15] VERSION="7 (Core)"
[2025-06-03 17:53:15] ID="centos"
[2025-06-03 17:53:15] ID_LIKE="rhel fedora"
[2025-06-03 17:53:15] VERSION_ID="7"
[2025-06-03 17:53:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:53:15] ANSI_COLOR="0;31"
[2025-06-03 17:53:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:53:15] HOME_URL="https://www.centos.org/"
[2025-06-03 17:53:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:53:15] 
[2025-06-03 17:53:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:53:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:53:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:53:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:53:15] 
[2025-06-03 17:53:15] 2025-06-03 15:51:22,849 | INFO     | **************************************
[2025-06-03 17:53:15] 2025-06-03 15:51:23,352 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-03 17:53:15] 2025-06-03 15:51:23,372 | INFO     | sufficient remaining disk space (1655547363328 B)
[2025-06-03 17:53:15] 2025-06-03 15:51:23,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:53:15] 2025-06-03 15:51:23,373 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:53:15] 2025-06-03 15:51:23,373 | INFO     | update_server=False
[2025-06-03 17:53:15] 2025-06-03 15:51:23,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:53:15] 2025-06-03 15:51:23,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:53:15] 2025-06-03 15:51:23,374 | INFO     | aborting loop
[2025-06-03 17:53:15] 2025-06-03 15:51:23,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:53:15] 2025-06-03 15:51:24,199 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:53:15] 2025-06-03 15:51:24,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:53:15] 2025-06-03 15:51:24,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:53:15] 2025-06-03 15:51:24,207 | INFO     | all job control threads have been joined
[2025-06-03 17:53:15] 2025-06-03 15:51:24,251 | INFO     | all data control threads have been joined
[2025-06-03 17:53:15] 2025-06-03 15:51:24,379 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:24,379 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:24,555 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:53:15] 2025-06-03 15:51:24,572 | INFO     | all payload control threads have been joined
[2025-06-03 17:53:15] 2025-06-03 15:51:25,048 | INFO     | [job] validate thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,126 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,212 | INFO     | [job] control thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,231 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,257 | INFO     | [data] control thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,291 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,334 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,577 | INFO     | [payload] control thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,729 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:25,814 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:26,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:53:15] 2025-06-03 15:51:26,560 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:27,368 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:27,867 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:33,834 | INFO     | job.realtimelogging is not enabled
[2025-06-03 17:53:15] 2025-06-03 15:51:34,839 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:53:15] 2025-06-03 15:51:36,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22511550351168)>', '<ExcThread(monitor, started 22511311877888)>']
[2025-06-03 17:53:15] 2025-06-03 15:51:37,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:53:15] 2025-06-03 15:51:37,266 | INFO     | [monitor] control thread has ended
[2025-06-03 17:53:15] 2025-06-03 15:51:41,937 | INFO     | all workflow threads have been joined
[2025-06-03 17:53:15] 2025-06-03 15:51:41,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:53:15] 2025-06-03 15:51:41,937 | INFO     | traces error code: 0
[2025-06-03 17:53:15] 2025-06-03 15:51:41,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:53:15] 2025-06-03 15:51:42,082 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:53:15] 2025-06-03 15:51:42,084 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:53:15] 2025-06-03 15:51:42,087 [wrapper] pilotpid: 81027
[2025-06-03 17:53:15] 2025-06-03 15:51:42,089 [wrapper] Pilot exit status: 0
[2025-06-03 17:53:15] 2025-06-03 15:51:42,100 [wrapper] pandaids: 6677386628
[2025-06-03 17:53:15] 2025-06-03 15:51:42,161 [wrapper] cleanup supervisor_pilot  322839 81028
[2025-06-03 17:53:15] 2025-06-03 15:51:42,164 [wrapper] Test setup, not cleaning
[2025-06-03 17:53:15] 2025-06-03 15:51:42,167 [wrapper] apfmon messages muted
[2025-06-03 17:53:15] 2025-06-03 15:51:42,170 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:53:15] 2025-06-03 15:51:42,173 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:53:15]  *** Error codes and diagnostics ***
[2025-06-03 17:53:15]     "exeErrorCode": 0,
[2025-06-03 17:53:15]     "exeErrorDiag": "",
[2025-06-03 17:53:15]     "pilotErrorCode": 0,
[2025-06-03 17:53:15]     "pilotErrorDiag": "",
[2025-06-03 17:53:15]  *** Listing of results directory ***
[2025-06-03 17:53:15] total 390004
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc      5111 Jun  2 19:12 queuedata.json
[2025-06-03 17:53:15] -rwx------ 1 boinc boinc     37140 Jun  2 19:12 runpilot2-wrapper.sh
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc       100 Jun  3 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:53:15] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 14:26 run_atlas
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc       105 Jun  3 14:26 job.xml
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc      6422 Jun  3 14:26 init_data.xml
[2025-06-03 17:53:15] -rw-r--r-- 2 boinc boinc 215113303 Jun  3 14:26 EVNT.45006593._000203.pool.root.1
[2025-06-03 17:53:15] -rw-r--r-- 2 boinc boinc     15093 Jun  3 14:26 start_atlas.sh
[2025-06-03 17:53:15] drwxrwx--x 2 boinc boinc      4096 Jun  3 14:26 shared
[2025-06-03 17:53:15] -rw-r--r-- 2 boinc boinc    508875 Jun  3 14:26 input.tar.gz
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc         0 Jun  3 14:26 boinc_lockfile
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc      2521 Jun  3 14:26 pandaJob.out
[2025-06-03 17:53:15] -rw------- 1 boinc boinc    982666 Jun  3 14:26 agis_schedconf.cvmfs.json
[2025-06-03 17:53:15] drwx------ 4 boinc boinc      4096 Jun  3 14:26 pilot3
[2025-06-03 17:53:15] -rw------- 1 boinc boinc 177488732 Jun  3 17:50 HITS.45006595._005070.pool.root.1
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc       528 Jun  3 17:50 boinc_task_state.xml
[2025-06-03 17:53:15] -rw------- 1 boinc boinc      1036 Jun  3 17:51 memory_monitor_summary.json
[2025-06-03 17:53:15] -rw------- 1 boinc boinc        95 Jun  3 17:51 pilot_heartbeat.json
[2025-06-03 17:53:15] -rw------- 1 boinc boinc   1603667 Jun  3 17:51 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:53:15] -rw------- 1 boinc boinc    323120 Jun  3 17:51 log.45006595._005070.job.log.tgz.1
[2025-06-03 17:53:15] -rw------- 1 boinc boinc      7726 Jun  3 17:51 heartbeat.json
[2025-06-03 17:53:15] -rw------- 1 boinc boinc      4436 Jun  3 17:51 pilotlog.txt
[2025-06-03 17:53:15] -rw------- 1 boinc boinc   1142429 Jun  3 17:51 log.45006595._005070.job.log.1
[2025-06-03 17:53:15] -rw------- 1 boinc boinc       357 Jun  3 17:51 output.list
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc       620 Jun  3 17:51 runtime_log
[2025-06-03 17:53:15] -rw------- 1 boinc boinc   1484800 Jun  3 17:51 result.tar.gz
[2025-06-03 17:53:15] -rw------- 1 boinc boinc       665 Jun  3 17:51 dthNDmetNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDvVKDmiFC2cm.diag
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc      9026 Jun  3 17:51 runtime_log.err
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc        26 Jun  3 17:53 wrapper_checkpoint.txt
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc      8192 Jun  3 17:53 boinc_mmap_file
[2025-06-03 17:53:15] -rw-r--r-- 1 boinc boinc     20942 Jun  3 17:53 stderr.txt
[2025-06-03 17:53:15] HITS file was successfully produced:
[2025-06-03 17:53:15] -rw------- 1 boinc boinc 177488732 Jun  3 17:50 shared/HITS.pool.root.1
[2025-06-03 17:53:15]  *** Contents of shared directory: ***
[2025-06-03 17:53:15] total 385380
[2025-06-03 17:53:15] -rw-r--r-- 2 boinc boinc 215113303 Jun  3 14:26 ATLAS.root_0
[2025-06-03 17:53:15] -rw-r--r-- 2 boinc boinc     15093 Jun  3 14:26 start_atlas.sh
[2025-06-03 17:53:15] -rw-r--r-- 2 boinc boinc    508875 Jun  3 14:26 input.tar.gz
[2025-06-03 17:53:15] -rw------- 1 boinc boinc 177488732 Jun  3 17:50 HITS.pool.root.1
[2025-06-03 17:53:15] -rw------- 1 boinc boinc   1484800 Jun  3 17:51 result.tar.gz
17:53:17 (76974): run_atlas exited; CPU time 47312.067496
17:53:17 (76974): called boinc_finish(0)

</stderr_txt>
]]>

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