Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:57 (635786): wrapper (7.7.26015): starting
14:40:57 (635786): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 14:40:57] Arguments: --nthreads 4
[2025-06-04 14:40:57] Threads: 4
[2025-06-04 14:40:57] Checking for CVMFS
[2025-06-04 14:40:57] No cvmfs_config command found, will try listing directly
[2025-06-04 14:40:57] CVMFS is ok
[2025-06-04 14:40:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:40:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:40:57] Further information can be found at the LHC@home message board.
[2025-06-04 14:40:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:40:57] Checking for apptainer binary...
[2025-06-04 14:40:57] which: no apptainer in ((null))
[2025-06-04 14:40:57] apptainer is not installed, using version from CVMFS
[2025-06-04 14:40:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:40:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-04 14:40:57] apptainer works
[2025-06-04 14:40:57] Set ATHENA_PROC_NUMBER=4
[2025-06-04 14:40:57] Set ATHENA_CORE_NUMBER=4
[2025-06-04 14:40:57] Starting ATLAS job with PandaID=6677386649
[2025-06-04 14:40:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:39:16]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:39:16] 2025-06-04 15:27:16,850 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:39:16] 2025-06-04 15:27:20,214 | WARNING  | process 646844 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 17:39:16] 2025-06-04 15:27:20,214 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677386649/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:39:16] 2025-06-04 15:27:20,567 | INFO     | number of running child processes to parent process 646844: 1
[2025-06-04 17:39:16] 2025-06-04 15:27:20,567 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:39:16] 2025-06-04 15:27:23,069 | INFO     | monitor loop #727: job 0:6677386649 is in state 'finished'
[2025-06-04 17:39:16] 2025-06-04 15:27:23,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,082 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 17:39:16] 2025-06-04 15:27:24,082 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677386649/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,083 | INFO     | extracted standard info from prmon json
[2025-06-04 17:39:16] 2025-06-04 15:27:24,083 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:39:16] 2025-06-04 15:27:24,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:39:16] 2025-06-04 15:27:24,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:39:16] 2025-06-04 15:27:24,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:39:16] 2025-06-04 15:27:24,086 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:39:16] 2025-06-04 15:27:24,087 | INFO     | sum of square deviations: 1342841922.0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,088 | INFO     | sum of deviations: 12020414108.99999
[2025-06-04 17:39:16] 2025-06-04 15:27:24,088 | INFO     | mean x: 1749045838.0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,088 | INFO     | mean y: 2324793.012269939
[2025-06-04 17:39:16] 2025-06-04 15:27:24,088 | INFO     | -- intersect: -15654212975.089157
[2025-06-04 17:39:16] 2025-06-04 15:27:24,088 | INFO     | intersect: -15654212975.089157
[2025-06-04 17:39:16] 2025-06-04 15:27:24,088 | INFO     | chi2: 1.6722744764641628
[2025-06-04 17:39:16] 2025-06-04 15:27:24,088 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 17:39:16] 2025-06-04 15:27:24,089 | INFO     | sum of deviations: 11725086086.000002
[2025-06-04 17:39:16] 2025-06-04 15:27:24,089 | INFO     | mean x: 1749045685.5
[2025-06-04 17:39:16] 2025-06-04 15:27:24,089 | INFO     | mean y: 2324417.658227848
[2025-06-04 17:39:16] 2025-06-04 15:27:24,089 | INFO     | -- intersect: -16765816143.544096
[2025-06-04 17:39:16] 2025-06-04 15:27:24,089 | INFO     | intersect: -16765816143.544096
[2025-06-04 17:39:16] 2025-06-04 15:27:24,090 | INFO     | chi2: 1.6740138440322048
[2025-06-04 17:39:16] 2025-06-04 15:27:24,090 | INFO     | current chi2=1.6740138440322048 (change=-0.1040120860852721 %)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,090 | INFO     | right removable region: 157
[2025-06-04 17:39:16] 2025-06-04 15:27:24,090 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 17:39:16] 2025-06-04 15:27:24,091 | INFO     | sum of deviations: -14229743737.500002
[2025-06-04 17:39:16] 2025-06-04 15:27:24,091 | INFO     | mean x: 1749045990.5
[2025-06-04 17:39:16] 2025-06-04 15:27:24,091 | INFO     | mean y: 2357806.2721518986
[2025-06-04 17:39:16] 2025-06-04 15:27:24,091 | INFO     | -- intersect: 20352433106.235744
[2025-06-04 17:39:16] 2025-06-04 15:27:24,091 | INFO     | intersect: 20352433106.235744
[2025-06-04 17:39:16] 2025-06-04 15:27:24,091 | INFO     | chi2: 0.026945615722661867
[2025-06-04 17:39:16] 2025-06-04 15:27:24,091 | INFO     | current chi2=0.026945615722661867 (change=98.38868462672255 %)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,092 | INFO     | sum of square deviations: 1110539892.0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,092 | INFO     | sum of deviations: -11966724288.000002
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | mean x: 1749046143.0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | mean y: 2354709.581699346
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | -- intersect: 18849361567.27936
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | intersect: 18849361567.27936
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | chi2: 0.02237050611790097
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | current chi2=0.02237050611790097 (change=16.97905014251773 %)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | left removable region: 20
[2025-06-04 17:39:16] 2025-06-04 15:27:24,093 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,094 | INFO     | sum of deviations: -8085498882.000003
[2025-06-04 17:39:16] 2025-06-04 15:27:24,094 | INFO     | mean x: 1749046265.0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,094 | INFO     | mean y: 2349976.321167883
[2025-06-04 17:39:16] 2025-06-04 15:27:24,094 | INFO     | -- intersect: 17739797879.390007
[2025-06-04 17:39:16] 2025-06-04 15:27:24,094 | INFO     | intersect: 17739797879.390007
[2025-06-04 17:39:16] 2025-06-04 15:27:24,095 | INFO     | chi2: 0.019580027502729348
[2025-06-04 17:39:16] 2025-06-04 15:27:24,095 | INFO     | -- intersect: 17739797879.390007
[2025-06-04 17:39:16] 2025-06-04 15:27:24,095 | INFO     | current memory leak: -10.14 B/s (using 137 data points, chi2=0.02)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,095 | INFO     | ..............................
[2025-06-04 17:39:16] 2025-06-04 15:27:24,095 | INFO     | . Timing measurements:
[2025-06-04 17:39:16] 2025-06-04 15:27:24,095 | INFO     | . get job = 0 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,096 | INFO     | . initial setup = 1 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,096 | INFO     | . payload setup = 7 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,096 | INFO     | . stage-in = 0 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,096 | INFO     | . payload execution = 9940 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,096 | INFO     | . stage-out = 1 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,096 | INFO     | . log creation = 0 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,096 | INFO     | ..............................
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | 
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | job summary report
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | --------------------------------------------------
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | PanDA job id: 6677386649
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | task id: 45006595
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | errors: (none)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | pilot state: finished 
[2025-06-04 17:39:16] 2025-06-04 15:27:24,184 | INFO     | transexitcode: 0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | exeerrorcode: 0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | exeerrordiag: 
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | exitcode: 0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | exitmsg: OK
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | cpuconsumptiontime: 38038 s
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | nevents: 400
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | neventsw: 0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | pid: 646844
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | pgrp: 646844
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | corecount: 4
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | event service: False
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | sizes: {0: 2397175, 1: 2397374, 5: 2397580, 12: 2397636, 9951: 2426065, 9953: 2435212, 9960: 2435326}
[2025-06-04 17:39:16] 2025-06-04 15:27:24,185 | INFO     | --------------------------------------------------
[2025-06-04 17:39:16] 2025-06-04 15:27:24,186 | INFO     | 
[2025-06-04 17:39:16] 2025-06-04 15:27:24,186 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-04 17:39:16] 2025-06-04 15:27:24,206 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,206 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,206 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,206 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,207 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:39:16] 2025-06-04 15:27:24,208 | INFO     | job 6677386649 has completed (purged errors)
[2025-06-04 17:39:16] 2025-06-04 15:27:24,208 | INFO     | overall cleanup function is called
[2025-06-04 17:39:16] 2025-06-04 15:27:25,215 | INFO     | --- collectZombieJob: --- 10, [646844]
[2025-06-04 17:39:16] 2025-06-04 15:27:25,216 | INFO     | zombie collector waiting for pid 646844
[2025-06-04 17:39:16] 2025-06-04 15:27:25,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:39:16] 2025-06-04 15:27:25,216 | INFO     | collected zombie processes
[2025-06-04 17:39:16] 2025-06-04 15:27:25,216 | INFO     | will attempt to kill all subprocesses of pid=646844
[2025-06-04 17:39:16] 2025-06-04 15:27:25,558 | INFO     | process IDs to be killed: [646844] (in reverse order)
[2025-06-04 17:39:16] 2025-06-04 15:27:25,677 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:39:16] 2025-06-04 15:27:25,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:39:16] 2025-06-04 15:27:25,690 | INFO     | did not find any defunct processes belonging to 646844
[2025-06-04 17:39:16] 2025-06-04 15:27:25,702 | INFO     | did not find any defunct processes belonging to 646844
[2025-06-04 17:39:16] 2025-06-04 15:27:25,703 | INFO     | ready for new job
[2025-06-04 17:39:16] 2025-06-04 15:27:25,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:39:16] 2025-06-04 15:27:25,705 | INFO     | **************************************
[2025-06-04 17:39:16] 2025-06-04 15:27:25,705 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:39:16] 2025-06-04 15:27:25,705 | INFO     | **************************************
[2025-06-04 17:39:16] 2025-06-04 15:27:25,705 | INFO     | 
[2025-06-04 17:39:16] 2025-06-04 15:27:25,708 | INFO     | architecture information:
[2025-06-04 17:39:16] 2025-06-04 15:27:25,709 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:39:16] 2025-06-04 15:27:25,727 | INFO     | cat /etc/os-release:
[2025-06-04 17:39:16] NAME="CentOS Linux"
[2025-06-04 17:39:16] VERSION="7 (Core)"
[2025-06-04 17:39:16] ID="centos"
[2025-06-04 17:39:16] ID_LIKE="rhel fedora"
[2025-06-04 17:39:16] VERSION_ID="7"
[2025-06-04 17:39:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:39:16] ANSI_COLOR="0;31"
[2025-06-04 17:39:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:39:16] HOME_URL="https://www.centos.org/"
[2025-06-04 17:39:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:39:16] 
[2025-06-04 17:39:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:39:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:39:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:39:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:39:16] 
[2025-06-04 17:39:16] 2025-06-04 15:27:25,727 | INFO     | **************************************
[2025-06-04 17:39:16] 2025-06-04 15:27:26,230 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-04 17:39:16] 2025-06-04 15:27:26,247 | INFO     | sufficient remaining disk space (649547743232 B)
[2025-06-04 17:39:16] 2025-06-04 15:27:26,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:39:16] 2025-06-04 15:27:26,248 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:39:16] 2025-06-04 15:27:26,248 | INFO     | update_server=False
[2025-06-04 17:39:16] 2025-06-04 15:27:26,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:39:16] 2025-06-04 15:27:26,392 | INFO     | all data control threads have been joined
[2025-06-04 17:39:16] 2025-06-04 15:27:26,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:39:16] 2025-06-04 15:27:26,578 | INFO     | aborting loop
[2025-06-04 17:39:16] 2025-06-04 15:27:26,806 | INFO     | all job control threads have been joined
[2025-06-04 17:39:16] 2025-06-04 15:27:26,851 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:39:16] 2025-06-04 15:27:26,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:39:16] 2025-06-04 15:27:26,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:39:16] 2025-06-04 15:27:27,179 | INFO     | all payload control threads have been joined
[2025-06-04 17:39:16] 2025-06-04 15:27:27,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:39:16] 2025-06-04 15:27:27,253 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:27,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:39:16] 2025-06-04 15:27:27,398 | INFO     | [data] control thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:27,546 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:27,582 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:27,812 | INFO     | [job] control thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:27,836 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:27,866 | INFO     | [job] validate thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:28,082 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:28,184 | INFO     | [payload] control thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:28,250 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:28,341 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:28,602 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:29,189 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:29,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:39:16] 2025-06-04 15:27:30,195 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:31,282 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:37,124 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:39:16] 2025-06-04 15:27:38,130 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:39:16] 2025-06-04 15:27:39,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22371175929664)>', '<ExcThread(monitor, started 22370720900864)>']
[2025-06-04 17:39:16] 2025-06-04 15:27:39,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:39:16] 2025-06-04 15:27:39,906 | INFO     | [monitor] control thread has ended
[2025-06-04 17:39:16] 2025-06-04 15:27:44,913 | INFO     | all workflow threads have been joined
[2025-06-04 17:39:16] 2025-06-04 15:27:44,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:39:16] 2025-06-04 15:27:44,913 | INFO     | traces error code: 0
[2025-06-04 17:39:16] 2025-06-04 15:27:44,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:39:16] 2025-06-04 15:27:45,086 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:39:16] 2025-06-04 15:27:45,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:39:16] 2025-06-04 15:27:45,092 [wrapper] pilotpid: 639500
[2025-06-04 17:39:16] 2025-06-04 15:27:45,094 [wrapper] Pilot exit status: 0
[2025-06-04 17:39:16] 2025-06-04 15:27:45,104 [wrapper] pandaids: 6677386649
[2025-06-04 17:39:16] 2025-06-04 15:27:45,178 [wrapper] cleanup supervisor_pilot  900216 639501
[2025-06-04 17:39:16] 2025-06-04 15:27:45,181 [wrapper] Test setup, not cleaning
[2025-06-04 17:39:16] 2025-06-04 15:27:45,184 [wrapper] apfmon messages muted
[2025-06-04 17:39:16] 2025-06-04 15:27:45,188 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:39:16] 2025-06-04 15:27:45,191 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:39:16]  *** Error codes and diagnostics ***
[2025-06-04 17:39:16]     "exeErrorCode": 0,
[2025-06-04 17:39:16]     "exeErrorDiag": "",
[2025-06-04 17:39:16]     "pilotErrorCode": 0,
[2025-06-04 17:39:16]     "pilotErrorDiag": "",
[2025-06-04 17:39:16]  *** Listing of results directory ***
[2025-06-04 17:39:16] total 391776
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc      5111 Jun  2 19:09 queuedata.json
[2025-06-04 17:39:16] -rwx------ 1 boinc boinc     37140 Jun  2 19:09 runpilot2-wrapper.sh
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc       100 Jun  4 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:39:16] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:40 run_atlas
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc       105 Jun  4 14:40 job.xml
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc      6632 Jun  4 14:40 init_data.xml
[2025-06-04 17:39:16] -rw-r--r-- 2 boinc boinc 216043607 Jun  4 14:40 EVNT.45006593._000204.pool.root.1
[2025-06-04 17:39:16] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:40 start_atlas.sh
[2025-06-04 17:39:16] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:40 shared
[2025-06-04 17:39:16] -rw-r--r-- 2 boinc boinc    508871 Jun  4 14:40 input.tar.gz
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc         0 Jun  4 14:40 boinc_lockfile
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc      2521 Jun  4 14:40 pandaJob.out
[2025-06-04 17:39:16] -rw------- 1 boinc boinc    986811 Jun  4 14:41 agis_schedconf.cvmfs.json
[2025-06-04 17:39:16] -rw------- 1 boinc boinc   1598969 Jun  4 14:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:39:16] drwx------ 4 boinc boinc      4096 Jun  4 14:41 pilot3
[2025-06-04 17:39:16] -rw------- 1 boinc boinc 178826453 Jun  4 17:26 HITS.45006595._005091.pool.root.1
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:26 boinc_task_state.xml
[2025-06-04 17:39:16] -rw------- 1 boinc boinc        95 Jun  4 17:27 pilot_heartbeat.json
[2025-06-04 17:39:16] -rw------- 1 boinc boinc      1034 Jun  4 17:27 memory_monitor_summary.json
[2025-06-04 17:39:16] -rw------- 1 boinc boinc    298115 Jun  4 17:27 log.45006595._005091.job.log.tgz.1
[2025-06-04 17:39:16] -rw------- 1 boinc boinc      7721 Jun  4 17:27 heartbeat.json
[2025-06-04 17:39:16] -rw------- 1 boinc boinc      4435 Jun  4 17:27 pilotlog.txt
[2025-06-04 17:39:16] -rw------- 1 boinc boinc    937668 Jun  4 17:27 log.45006595._005091.job.log.1
[2025-06-04 17:39:16] -rw------- 1 boinc boinc       357 Jun  4 17:27 output.list
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:27 runtime_log
[2025-06-04 17:39:16] -rw------- 1 boinc boinc   1259520 Jun  4 17:27 result.tar.gz
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc      9026 Jun  4 17:27 runtime_log.err
[2025-06-04 17:39:16] -rw------- 1 boinc boinc       664 Jun  4 17:27 kBzLDmcqNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmctVKDmd2L6pn.diag
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc        26 Jun  4 17:39 wrapper_checkpoint.txt
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:39 boinc_mmap_file
[2025-06-04 17:39:16] -rw-r--r-- 1 boinc boinc     20954 Jun  4 17:39 stderr.txt
[2025-06-04 17:39:16] HITS file was successfully produced:
[2025-06-04 17:39:16] -rw------- 1 boinc boinc 178826453 Jun  4 17:26 shared/HITS.pool.root.1
[2025-06-04 17:39:16]  *** Contents of shared directory: ***
[2025-06-04 17:39:16] total 387376
[2025-06-04 17:39:16] -rw-r--r-- 2 boinc boinc 216043607 Jun  4 14:40 ATLAS.root_0
[2025-06-04 17:39:16] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:40 start_atlas.sh
[2025-06-04 17:39:16] -rw-r--r-- 2 boinc boinc    508871 Jun  4 14:40 input.tar.gz
[2025-06-04 17:39:16] -rw------- 1 boinc boinc 178826453 Jun  4 17:26 HITS.pool.root.1
[2025-06-04 17:39:16] -rw------- 1 boinc boinc   1259520 Jun  4 17:27 result.tar.gz
17:39:18 (635786): run_atlas exited; CPU time 38389.391008
17:39:18 (635786): called boinc_finish(0)

</stderr_txt>
]]>

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