Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:44:15 (29264): wrapper (7.7.26015): starting
02:44:15 (29264): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:44:15] Arguments: --nthreads 8
[2025-06-03 02:44:15] Threads: 8
[2025-06-03 02:44:15] Checking for CVMFS
[2025-06-03 02:44:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:44:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:44:17] 2.11.2.0 13342 31052 98516 146723 1 59 16419817 25165825 4635 130560 0 15698466 99.770 16921498 1934 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:44:17] CVMFS is ok
[2025-06-03 02:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:44:17] Checking for apptainer binary...
[2025-06-03 02:44:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:44:17] Running /usr/bin/apptainer --version
[2025-06-03 02:44:17] apptainer version 1.3.2-1.el7
[2025-06-03 02:44:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:44:28] cg-vwn278.simple-grid.lan
[2025-06-03 02:44:28] apptainer works
[2025-06-03 02:44:28] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:44:28] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:44:29] Starting ATLAS job with PandaID=6677386366
[2025-06-03 02:44:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:50:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:50:07] 2025-06-03 04:42:28,574 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677386366/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:50:07] 2025-06-03 04:42:28,575 | INFO     | extracted standard info from prmon json
[2025-06-03 06:50:07] 2025-06-03 04:42:28,575 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:50:07] 2025-06-03 04:42:28,576 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:50:07] 2025-06-03 04:42:28,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:50:07] 2025-06-03 04:42:28,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:50:07] 2025-06-03 04:42:28,581 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:50:07] 2025-06-03 04:42:28,581 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,583 | INFO     | sum of deviations: 11442359198.999987
[2025-06-03 06:50:07] 2025-06-03 04:42:28,583 | INFO     | mean x: 1748918886.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,583 | INFO     | mean y: 2497175.7556561087
[2025-06-03 06:50:07] 2025-06-03 04:42:28,583 | INFO     | -- intersect: -5976645154.409621
[2025-06-03 06:50:07] 2025-06-03 04:42:28,583 | INFO     | intersect: -5976645154.409621
[2025-06-03 06:50:07] 2025-06-03 04:42:28,593 | INFO     | chi2: 6.510516017222871
[2025-06-03 06:50:07] 2025-06-03 04:42:28,594 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,595 | INFO     | sum of deviations: 26657681614.000015
[2025-06-03 06:50:07] 2025-06-03 04:42:28,596 | INFO     | mean x: 1748918733.5
[2025-06-03 06:50:07] 2025-06-03 04:42:28,596 | INFO     | mean y: 2507440.8055555555
[2025-06-03 06:50:07] 2025-06-03 04:42:28,596 | INFO     | -- intersect: -14917245701.176828
[2025-06-03 06:50:07] 2025-06-03 04:42:28,596 | INFO     | intersect: -14917245701.176828
[2025-06-03 06:50:07] 2025-06-03 04:42:28,596 | INFO     | chi2: 5.795137415902471
[2025-06-03 06:50:07] 2025-06-03 04:42:28,596 | INFO     | current chi2=5.795137415902471 (change=10.988047635977589 %)
[2025-06-03 06:50:07] 2025-06-03 04:42:28,596 | INFO     | right removable region: 215
[2025-06-03 06:50:07] 2025-06-03 04:42:28,597 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,599 | INFO     | sum of deviations: -64729523347.000015
[2025-06-03 06:50:07] 2025-06-03 04:42:28,599 | INFO     | mean x: 1748919038.5
[2025-06-03 06:50:07] 2025-06-03 04:42:28,599 | INFO     | mean y: 2549419.157407407
[2025-06-03 06:50:07] 2025-06-03 04:42:28,599 | INFO     | -- intersect: 36230331404.83714
[2025-06-03 06:50:07] 2025-06-03 04:42:28,599 | INFO     | intersect: 36230331404.83714
[2025-06-03 06:50:07] 2025-06-03 04:42:28,599 | INFO     | chi2: 1.8793195493430837
[2025-06-03 06:50:07] 2025-06-03 04:42:28,599 | INFO     | current chi2=1.8793195493430837 (change=71.13409222292756 %)
[2025-06-03 06:50:07] 2025-06-03 04:42:28,600 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,601 | INFO     | sum of deviations: -91341049067.00002
[2025-06-03 06:50:07] 2025-06-03 04:42:28,602 | INFO     | mean x: 1748919191.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,602 | INFO     | mean y: 2568394.9431279623
[2025-06-03 06:50:07] 2025-06-03 04:42:28,602 | INFO     | -- intersect: 54845379006.63595
[2025-06-03 06:50:07] 2025-06-03 04:42:28,602 | INFO     | intersect: 54845379006.63595
[2025-06-03 06:50:07] 2025-06-03 04:42:28,602 | INFO     | chi2: 1.0211759984179956
[2025-06-03 06:50:07] 2025-06-03 04:42:28,602 | INFO     | current chi2=1.0211759984179956 (change=45.6624607148397 %)
[2025-06-03 06:50:07] 2025-06-03 04:42:28,603 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 06:50:07] 2025-06-03 04:42:28,604 | INFO     | sum of deviations: -89063528514.5
[2025-06-03 06:50:07] 2025-06-03 04:42:28,605 | INFO     | mean x: 1748919343.5
[2025-06-03 06:50:07] 2025-06-03 04:42:28,605 | INFO     | mean y: 2566648.2669902914
[2025-06-03 06:50:07] 2025-06-03 04:42:28,605 | INFO     | -- intersect: 57467092460.28556
[2025-06-03 06:50:07] 2025-06-03 04:42:28,605 | INFO     | intersect: 57467092460.28556
[2025-06-03 06:50:07] 2025-06-03 04:42:28,605 | INFO     | chi2: 1.00561071204783
[2025-06-03 06:50:07] 2025-06-03 04:42:28,605 | INFO     | current chi2=1.00561071204783 (change=1.5242510981730233 %)
[2025-06-03 06:50:07] 2025-06-03 04:42:28,605 | INFO     | left removable region: 30
[2025-06-03 06:50:07] 2025-06-03 04:42:28,606 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,607 | INFO     | sum of deviations: -56126591781.99999
[2025-06-03 06:50:07] 2025-06-03 04:42:28,607 | INFO     | mean x: 1748919618.0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,607 | INFO     | mean y: 2565557.8378378376
[2025-06-03 06:50:07] 2025-06-03 04:42:28,607 | INFO     | -- intersect: 50001137565.13072
[2025-06-03 06:50:07] 2025-06-03 04:42:28,607 | INFO     | intersect: 50001137565.13072
[2025-06-03 06:50:07] 2025-06-03 04:42:28,615 | INFO     | chi2: 0.20341132244720778
[2025-06-03 06:50:07] 2025-06-03 04:42:28,615 | INFO     | -- intersect: 50001137565.13072
[2025-06-03 06:50:07] 2025-06-03 04:42:28,615 | INFO     | current memory leak: -28.59 B/s (using 185 data points, chi2=0.20)
[2025-06-03 06:50:07] 2025-06-03 04:42:28,616 | INFO     | ..............................
[2025-06-03 06:50:07] 2025-06-03 04:42:28,616 | INFO     | . Timing measurements:
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | . get job = 0 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | . initial setup = 10 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | . payload setup = 162 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | . stage-in = 0 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | . payload execution = 13622 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | . stage-out = 3 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | . log creation = 1 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,617 | INFO     | ..............................
[2025-06-03 06:50:07] 2025-06-03 04:42:28,754 | INFO     | 
[2025-06-03 06:50:07] 2025-06-03 04:42:28,754 | INFO     | job summary report
[2025-06-03 06:50:07] 2025-06-03 04:42:28,754 | INFO     | --------------------------------------------------
[2025-06-03 06:50:07] 2025-06-03 04:42:28,754 | INFO     | PanDA job id: 6677386366
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | task id: 45006595
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | errors: (none)
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | pilot state: finished 
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | transexitcode: 0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | exeerrorcode: 0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | exeerrordiag: 
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | exitcode: 0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | exitmsg: OK
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | cpuconsumptiontime: 50908 s
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | nevents: 400
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | neventsw: 0
[2025-06-03 06:50:07] 2025-06-03 04:42:28,755 | INFO     | pid: 9323
[2025-06-03 06:50:07] 2025-06-03 04:42:28,756 | INFO     | pgrp: 9323
[2025-06-03 06:50:07] 2025-06-03 04:42:28,756 | INFO     | corecount: 8
[2025-06-03 06:50:07] 2025-06-03 04:42:28,756 | INFO     | event service: False
[2025-06-03 06:50:07] 2025-06-03 04:42:28,756 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 56: 2405501, 66: 2405529, 77: 2405557, 88: 2405613, 89: 2406127, 98
[2025-06-03 06:50:07] 2025-06-03 04:42:28,756 | INFO     | --------------------------------------------------
[2025-06-03 06:50:07] 2025-06-03 04:42:28,756 | INFO     | 
[2025-06-03 06:50:07] 2025-06-03 04:42:28,756 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 06:50:07] 2025-06-03 04:42:29,283 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,284 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,284 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,284 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,286 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:50:07] 2025-06-03 04:42:29,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,286 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:50:07] 2025-06-03 04:42:29,286 | INFO     | job 6677386366 has completed (purged errors)
[2025-06-03 06:50:07] 2025-06-03 04:42:29,286 | INFO     | overall cleanup function is called
[2025-06-03 06:50:07] 2025-06-03 04:42:30,296 | INFO     | --- collectZombieJob: --- 10, [9323]
[2025-06-03 06:50:07] 2025-06-03 04:42:30,296 | INFO     | zombie collector waiting for pid 9323
[2025-06-03 06:50:07] 2025-06-03 04:42:30,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:50:07] 2025-06-03 04:42:30,297 | INFO     | collected zombie processes
[2025-06-03 06:50:07] 2025-06-03 04:42:30,297 | INFO     | will attempt to kill all subprocesses of pid=9323
[2025-06-03 06:50:07] 2025-06-03 04:42:30,458 | INFO     | process IDs to be killed: [9323] (in reverse order)
[2025-06-03 06:50:07] 2025-06-03 04:42:31,158 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:50:07] 2025-06-03 04:42:31,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:50:07] 2025-06-03 04:42:31,161 | INFO     | did not find any defunct processes belonging to 9323
[2025-06-03 06:50:07] 2025-06-03 04:42:31,164 | INFO     | did not find any defunct processes belonging to 9323
[2025-06-03 06:50:07] 2025-06-03 04:42:31,164 | INFO     | ready for new job
[2025-06-03 06:50:07] 2025-06-03 04:42:31,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:50:07] 2025-06-03 04:42:31,167 | INFO     | **************************************
[2025-06-03 06:50:07] 2025-06-03 04:42:31,167 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:50:07] 2025-06-03 04:42:31,167 | INFO     | **************************************
[2025-06-03 06:50:07] 2025-06-03 04:42:31,167 | INFO     | 
[2025-06-03 06:50:07] 2025-06-03 04:42:31,168 | INFO     | pilot is running in a VM
[2025-06-03 06:50:07] 2025-06-03 04:42:31,168 | INFO     | architecture information:
[2025-06-03 06:50:07] 2025-06-03 04:42:31,171 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:50:07] 2025-06-03 04:42:31,255 | INFO     | cat /etc/os-release:
[2025-06-03 06:50:07] NAME="CentOS Linux"
[2025-06-03 06:50:07] VERSION="7 (Core)"
[2025-06-03 06:50:07] ID="centos"
[2025-06-03 06:50:07] ID_LIKE="rhel fedora"
[2025-06-03 06:50:07] VERSION_ID="7"
[2025-06-03 06:50:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:50:07] ANSI_COLOR="0;31"
[2025-06-03 06:50:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:50:07] HOME_URL="https://www.centos.org/"
[2025-06-03 06:50:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:50:07] 
[2025-06-03 06:50:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:50:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:50:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:50:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:50:07] 
[2025-06-03 06:50:07] 2025-06-03 04:42:31,255 | INFO     | **************************************
[2025-06-03 06:50:07] 2025-06-03 04:42:31,759 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 06:50:07] 2025-06-03 04:42:31,806 | INFO     | sufficient remaining disk space (496445161472 B)
[2025-06-03 06:50:07] 2025-06-03 04:42:31,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:50:07] 2025-06-03 04:42:31,806 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:50:07] 2025-06-03 04:42:31,807 | INFO     | update_server=False
[2025-06-03 06:50:07] 2025-06-03 04:42:31,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:50:07] 2025-06-03 04:42:31,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:50:07] 2025-06-03 04:42:31,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:50:07] 2025-06-03 04:42:31,826 | INFO     | aborting loop
[2025-06-03 06:50:07] 2025-06-03 04:42:32,231 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:50:07] 2025-06-03 04:42:32,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:50:07] 2025-06-03 04:42:32,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:50:07] 2025-06-03 04:42:32,592 | INFO     | all payload control threads have been joined
[2025-06-03 06:50:07] 2025-06-03 04:42:32,603 | INFO     | all job control threads have been joined
[2025-06-03 06:50:07] 2025-06-03 04:42:32,724 | INFO     | all data control threads have been joined
[2025-06-03 06:50:07] 2025-06-03 04:42:32,813 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:32,832 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:32,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:50:07] 2025-06-03 04:42:32,966 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:32,975 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,009 | INFO     | [job] validate thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,010 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,140 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,382 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,598 | INFO     | [payload] control thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,608 | INFO     | [job] control thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,730 | INFO     | [data] control thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:33,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:50:07] 2025-06-03 04:42:33,986 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:34,778 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:34,896 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:35,817 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:50:07] 2025-06-03 04:42:37,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694853117760)>', '<ExcThread(monitor, started 139694121666304)>']
[2025-06-03 06:50:07] 2025-06-03 04:42:38,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:50:07] 2025-06-03 04:42:38,267 | INFO     | [monitor] control thread has ended
[2025-06-03 06:50:07] 2025-06-03 04:42:42,868 | INFO     | all workflow threads have been joined
[2025-06-03 06:50:07] 2025-06-03 04:42:42,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:50:07] 2025-06-03 04:42:42,869 | INFO     | traces error code: 0
[2025-06-03 06:50:07] 2025-06-03 04:42:42,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:50:07] 2025-06-03 04:42:43,259 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:50:07] 2025-06-03 04:42:43,357 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:50:07] 2025-06-03 04:42:43,470 [wrapper] pilotpid: 2696
[2025-06-03 06:50:07] 2025-06-03 04:42:43,574 [wrapper] Pilot exit status: 0
[2025-06-03 06:50:07] 2025-06-03 04:42:43,975 [wrapper] pandaids: 6677386366
[2025-06-03 06:50:07] 2025-06-03 04:42:44,723 [wrapper] cleanup supervisor_pilot 23432 2697
[2025-06-03 06:50:07] 2025-06-03 04:42:44,823 [wrapper] Test setup, not cleaning
[2025-06-03 06:50:07] 2025-06-03 04:42:44,953 [wrapper] apfmon messages muted
[2025-06-03 06:50:07] 2025-06-03 04:42:45,053 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:50:07] 2025-06-03 04:42:45,137 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:50:07]  *** Error codes and diagnostics ***
[2025-06-03 06:50:07]     "exeErrorCode": 0,
[2025-06-03 06:50:07]     "exeErrorDiag": "",
[2025-06-03 06:50:07]     "pilotErrorCode": 0,
[2025-06-03 06:50:07]     "pilotErrorDiag": "",
[2025-06-03 06:50:07]  *** Listing of results directory ***
[2025-06-03 06:50:07] total 398244
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:08 queuedata.json
[2025-06-03 06:50:07] -rwx------. 1 boinc boinc     37140 Jun  2 19:09 runpilot2-wrapper.sh
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:50:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:44 run_atlas
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:44 job.xml
[2025-06-03 06:50:07] -rw-r--r--. 2 boinc boinc 213665115 Jun  3 02:44 EVNT.45006593._000197.pool.root.1
[2025-06-03 06:50:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:44 start_atlas.sh
[2025-06-03 06:50:07] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:44 shared
[2025-06-03 06:50:07] -rw-r--r--. 2 boinc boinc    508873 Jun  3 02:44 input.tar.gz
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc      6391 Jun  3 02:44 init_data.xml
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:44 boinc_lockfile
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc      2521 Jun  3 02:44 pandaJob.out
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc    988081 Jun  3 02:47 agis_schedconf.cvmfs.json
[2025-06-03 06:50:07] drwx------. 4 boinc boinc      4096 Jun  3 02:47 pilot3
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc 187129377 Jun  3 06:39 HITS.45006595._004924.pool.root.1
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc       531 Jun  3 06:39 boinc_task_state.xml
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc      1015 Jun  3 06:40 memory_monitor_summary.json
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc   1603667 Jun  3 06:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc    396169 Jun  3 06:40 log.45006595._004924.job.log.tgz.1
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc        95 Jun  3 06:42 pilot_heartbeat.json
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc      7692 Jun  3 06:42 heartbeat.json
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc      4416 Jun  3 06:42 pilotlog.txt
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc   1193600 Jun  3 06:42 log.45006595._004924.job.log.1
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc       357 Jun  3 06:42 output.list
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:42 runtime_log
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc   1607680 Jun  3 06:42 result.tar.gz
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc      8659 Jun  3 06:42 runtime_log.err
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc       656 Jun  3 06:42 03KMDm0pNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwefKDmaKPHzm.diag
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:50 boinc_mmap_file
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:50 wrapper_checkpoint.txt
[2025-06-03 06:50:07] -rw-r--r--. 1 boinc boinc     20521 Jun  3 06:50 stderr.txt
[2025-06-03 06:50:07] HITS file was successfully produced:
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc 187129377 Jun  3 06:39 shared/HITS.pool.root.1
[2025-06-03 06:50:07]  *** Contents of shared directory: ***
[2025-06-03 06:50:07] total 393492
[2025-06-03 06:50:07] -rw-r--r--. 2 boinc boinc 213665115 Jun  3 02:44 ATLAS.root_0
[2025-06-03 06:50:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:44 start_atlas.sh
[2025-06-03 06:50:07] -rw-r--r--. 2 boinc boinc    508873 Jun  3 02:44 input.tar.gz
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc 187129377 Jun  3 06:39 HITS.pool.root.1
[2025-06-03 06:50:07] -rw-------. 1 boinc boinc   1607680 Jun  3 06:42 result.tar.gz
06:50:09 (29264): run_atlas exited; CPU time 51100.723938
06:50:09 (29264): called boinc_finish(0)

</stderr_txt>
]]>

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