Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:30:15 (5242): wrapper (7.7.26015): starting
03:30:15 (5242): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:30:15] Arguments: --nthreads 8
[2025-06-03 03:30:15] Threads: 8
[2025-06-03 03:30:15] Checking for CVMFS
[2025-06-03 03:30:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:30:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:30:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:30:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:30:18] 2.11.2.0 31726 31109 88952 146723 2 161 22868798 25165825 4638 130560 0 15770489 99.778 18626841 1914 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 03:30:18] CVMFS is ok
[2025-06-03 03:30:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:30:18] Checking for apptainer binary...
[2025-06-03 03:30:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:30:18] Running /usr/bin/apptainer --version
[2025-06-03 03:30:18] apptainer version 1.3.2-1.el7
[2025-06-03 03:30:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:30:23] cg-vwn427.simple-grid.lan
[2025-06-03 03:30:23] apptainer works
[2025-06-03 03:30:23] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:30:23] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:30:23] Starting ATLAS job with PandaID=6677386272
[2025-06-03 03:30:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:30:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:30:04] 2025-06-03 05:25:17,031 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:30:04] 2025-06-03 05:25:17,031 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:30:04] 2025-06-03 05:25:17,031 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:30:04] 2025-06-03 05:25:17,037 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:30:04] 2025-06-03 05:25:17,044 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 07:30:04] 2025-06-03 05:25:17,047 | INFO     | sum of deviations: 91832086348.50002
[2025-06-03 07:30:04] 2025-06-03 05:25:17,047 | INFO     | mean x: 1748921550.5
[2025-06-03 07:30:04] 2025-06-03 05:25:17,047 | INFO     | mean y: 2414409.371559633
[2025-06-03 07:30:04] 2025-06-03 05:25:17,047 | INFO     | -- intersect: -49992521296.0176
[2025-06-03 07:30:04] 2025-06-03 05:25:17,047 | INFO     | intersect: -49992521296.0176
[2025-06-03 07:30:04] 2025-06-03 05:25:17,048 | INFO     | chi2: 8.021791356775804
[2025-06-03 07:30:04] 2025-06-03 05:25:17,048 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,050 | INFO     | sum of deviations: 103899380635.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,050 | INFO     | mean x: 1748921398.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,058 | INFO     | mean y: 2422739.3427230045
[2025-06-03 07:30:04] 2025-06-03 05:25:17,058 | INFO     | -- intersect: -60639866614.90105
[2025-06-03 07:30:04] 2025-06-03 05:25:17,058 | INFO     | intersect: -60639866614.90105
[2025-06-03 07:30:04] 2025-06-03 05:25:17,058 | INFO     | chi2: 7.331151903700838
[2025-06-03 07:30:04] 2025-06-03 05:25:17,059 | INFO     | current chi2=7.331151903700838 (change=8.60954146472035 %)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,059 | INFO     | right removable region: 212
[2025-06-03 07:30:04] 2025-06-03 05:25:17,059 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,061 | INFO     | sum of deviations: 16340902588.999996
[2025-06-03 07:30:04] 2025-06-03 05:25:17,061 | INFO     | mean x: 1748921703.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,061 | INFO     | mean y: 2467668.3568075118
[2025-06-03 07:30:04] 2025-06-03 05:25:17,061 | INFO     | -- intersect: -9535124470.019526
[2025-06-03 07:30:04] 2025-06-03 05:25:17,062 | INFO     | intersect: -9535124470.019526
[2025-06-03 07:30:04] 2025-06-03 05:25:17,062 | INFO     | chi2: 2.9461421606616103
[2025-06-03 07:30:04] 2025-06-03 05:25:17,062 | INFO     | current chi2=2.9461421606616103 (change=63.27326366855605 %)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,062 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,064 | INFO     | sum of deviations: -29982721616.5
[2025-06-03 07:30:04] 2025-06-03 05:25:17,064 | INFO     | mean x: 1748921855.5
[2025-06-03 07:30:04] 2025-06-03 05:25:17,064 | INFO     | mean y: 2501785.091346154
[2025-06-03 07:30:04] 2025-06-03 05:25:17,064 | INFO     | -- intersect: 18794937223.921078
[2025-06-03 07:30:04] 2025-06-03 05:25:17,064 | INFO     | intersect: 18794937223.921078
[2025-06-03 07:30:04] 2025-06-03 05:25:17,065 | INFO     | chi2: 0.9512207696888394
[2025-06-03 07:30:04] 2025-06-03 05:25:17,065 | INFO     | current chi2=0.9512207696888394 (change=67.71300508203495 %)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,065 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,067 | INFO     | sum of deviations: -33057334232.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,067 | INFO     | mean x: 1748922008.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,067 | INFO     | mean y: 2504132.4039408867
[2025-06-03 07:30:04] 2025-06-03 05:25:17,067 | INFO     | -- intersect: 22291077580.32969
[2025-06-03 07:30:04] 2025-06-03 05:25:17,067 | INFO     | intersect: 22291077580.32969
[2025-06-03 07:30:04] 2025-06-03 05:25:17,068 | INFO     | chi2: 0.9200301971345428
[2025-06-03 07:30:04] 2025-06-03 05:25:17,068 | INFO     | current chi2=0.9200301971345428 (change=3.2790045747739036 %)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,068 | INFO     | left removable region: 30
[2025-06-03 07:30:04] 2025-06-03 05:25:17,068 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 07:30:04] 2025-06-03 05:25:17,070 | INFO     | sum of deviations: 2121675343.0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,070 | INFO     | mean x: 1748922282.5
[2025-06-03 07:30:04] 2025-06-03 05:25:17,070 | INFO     | mean y: 2496091.076923077
[2025-06-03 07:30:04] 2025-06-03 05:25:17,070 | INFO     | -- intersect: -1982547113.8118153
[2025-06-03 07:30:04] 2025-06-03 05:25:17,070 | INFO     | intersect: -1982547113.8118153
[2025-06-03 07:30:04] 2025-06-03 05:25:17,070 | INFO     | chi2: 0.013072923547156761
[2025-06-03 07:30:04] 2025-06-03 05:25:17,071 | INFO     | -- intersect: -1982547113.8118153
[2025-06-03 07:30:04] 2025-06-03 05:25:17,071 | INFO     | current memory leak: 1.14 B/s (using 182 data points, chi2=0.01)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | ..............................
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . Timing measurements:
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . get job = 0 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . initial setup = 10 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . payload setup = 163 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . stage-in = 0 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . payload execution = 13446 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . stage-out = 3 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | . log creation = 0 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,072 | INFO     | ..............................
[2025-06-03 07:30:04] 2025-06-03 05:25:17,267 | INFO     | 
[2025-06-03 07:30:04] 2025-06-03 05:25:17,268 | INFO     | job summary report
[2025-06-03 07:30:04] 2025-06-03 05:25:17,268 | INFO     | --------------------------------------------------
[2025-06-03 07:30:04] 2025-06-03 05:25:17,268 | INFO     | PanDA job id: 6677386272
[2025-06-03 07:30:04] 2025-06-03 05:25:17,268 | INFO     | task id: 45006595
[2025-06-03 07:30:04] 2025-06-03 05:25:17,268 | INFO     | errors: (none)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:30:04] 2025-06-03 05:25:17,268 | INFO     | pilot state: finished 
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | transexitcode: 0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | exeerrorcode: 0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | exeerrordiag: 
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | exitcode: 0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | exitmsg: OK
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | cpuconsumptiontime: 49354 s
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | nevents: 400
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | neventsw: 0
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | pid: 17518
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | pgrp: 17518
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | corecount: 8
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | event service: False
[2025-06-03 07:30:04] 2025-06-03 05:25:17,269 | INFO     | sizes: {0: 2404951, 1: 2405206, 2: 2405206, 12: 2405234, 23: 2405262, 34: 2405290, 44: 2405446, 55: 2405474, 66: 2405502, 77: 2405530, 87: 2405586, 93: 2406100, 98
[2025-06-03 07:30:04] 2025-06-03 05:25:17,270 | INFO     | --------------------------------------------------
[2025-06-03 07:30:04] 2025-06-03 05:25:17,270 | INFO     | 
[2025-06-03 07:30:04] 2025-06-03 05:25:17,270 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-03 07:30:04] 2025-06-03 05:25:17,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | job 6677386272 has completed (purged errors)
[2025-06-03 07:30:04] 2025-06-03 05:25:17,924 | INFO     | overall cleanup function is called
[2025-06-03 07:30:04] 2025-06-03 05:25:18,152 | INFO     | PID=8962 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 07:30:04] 2025-06-03 05:25:18,153 | INFO     | .. there are 9 such processes running
[2025-06-03 07:30:04] 2025-06-03 05:25:18,932 | INFO     | --- collectZombieJob: --- 10, [17518]
[2025-06-03 07:30:04] 2025-06-03 05:25:18,933 | INFO     | zombie collector waiting for pid 17518
[2025-06-03 07:30:04] 2025-06-03 05:25:18,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:30:04] 2025-06-03 05:25:18,933 | INFO     | collected zombie processes
[2025-06-03 07:30:04] 2025-06-03 05:25:18,933 | INFO     | will attempt to kill all subprocesses of pid=17518
[2025-06-03 07:30:04] 2025-06-03 05:25:19,049 | INFO     | process IDs to be killed: [17518] (in reverse order)
[2025-06-03 07:30:04] 2025-06-03 05:25:19,978 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:30:04] 2025-06-03 05:25:19,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:30:04] 2025-06-03 05:25:19,982 | INFO     | did not find any defunct processes belonging to 17518
[2025-06-03 07:30:04] 2025-06-03 05:25:19,984 | INFO     | did not find any defunct processes belonging to 17518
[2025-06-03 07:30:04] 2025-06-03 05:25:19,985 | INFO     | ready for new job
[2025-06-03 07:30:04] 2025-06-03 05:25:19,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:30:04] 2025-06-03 05:25:19,987 | INFO     | **************************************
[2025-06-03 07:30:04] 2025-06-03 05:25:19,987 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:30:04] 2025-06-03 05:25:19,987 | INFO     | **************************************
[2025-06-03 07:30:04] 2025-06-03 05:25:19,987 | INFO     | 
[2025-06-03 07:30:04] 2025-06-03 05:25:19,988 | INFO     | pilot is running in a VM
[2025-06-03 07:30:04] 2025-06-03 05:25:19,988 | INFO     | architecture information:
[2025-06-03 07:30:04] 2025-06-03 05:25:19,998 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:30:04] 2025-06-03 05:25:20,228 | INFO     | cat /etc/os-release:
[2025-06-03 07:30:04] NAME="CentOS Linux"
[2025-06-03 07:30:04] VERSION="7 (Core)"
[2025-06-03 07:30:04] ID="centos"
[2025-06-03 07:30:04] ID_LIKE="rhel fedora"
[2025-06-03 07:30:04] VERSION_ID="7"
[2025-06-03 07:30:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:30:04] ANSI_COLOR="0;31"
[2025-06-03 07:30:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:30:04] HOME_URL="https://www.centos.org/"
[2025-06-03 07:30:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:30:04] 
[2025-06-03 07:30:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:30:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:30:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:30:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:30:04] 
[2025-06-03 07:30:04] 2025-06-03 05:25:20,228 | INFO     | **************************************
[2025-06-03 07:30:04] 2025-06-03 05:25:20,732 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-03 07:30:04] 2025-06-03 05:25:20,952 | INFO     | sufficient remaining disk space (496585670656 B)
[2025-06-03 07:30:04] 2025-06-03 05:25:20,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:30:04] 2025-06-03 05:25:20,953 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:30:04] 2025-06-03 05:25:20,953 | INFO     | update_server=False
[2025-06-03 07:30:04] 2025-06-03 05:25:20,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:30:04] 2025-06-03 05:25:20,953 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:30:04] 2025-06-03 05:25:20,953 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:30:04] 2025-06-03 05:25:20,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:30:04] 2025-06-03 05:25:20,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:30:04] 2025-06-03 05:25:21,325 | INFO     | all job control threads have been joined
[2025-06-03 07:30:04] 2025-06-03 05:25:21,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:30:04] 2025-06-03 05:25:21,359 | INFO     | aborting loop
[2025-06-03 07:30:04] 2025-06-03 05:25:21,827 | INFO     | all data control threads have been joined
[2025-06-03 07:30:04] 2025-06-03 05:25:21,959 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:22,141 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:22,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:30:04] 2025-06-03 05:25:22,220 | INFO     | all payload control threads have been joined
[2025-06-03 07:30:04] 2025-06-03 05:25:22,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:30:04] 2025-06-03 05:25:22,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:30:04] 2025-06-03 05:25:22,332 | INFO     | [job] control thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:22,365 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:22,373 | INFO     | [job] validate thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:22,635 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:22,722 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:22,834 | INFO     | [data] control thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:23,125 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:23,160 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:23,227 | INFO     | [payload] control thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:23,239 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:23,285 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:23,478 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:24,192 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:26,251 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:30:04] 2025-06-03 05:25:27,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632964699968)>', '<ExcThread(monitor, started 140632746194688)>']
[2025-06-03 07:30:04] 2025-06-03 05:25:27,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:30:04] 2025-06-03 05:25:27,995 | INFO     | [monitor] control thread has ended
[2025-06-03 07:30:04] 2025-06-03 05:25:32,736 | INFO     | all workflow threads have been joined
[2025-06-03 07:30:04] 2025-06-03 05:25:32,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:30:04] 2025-06-03 05:25:32,737 | INFO     | traces error code: 0
[2025-06-03 07:30:04] 2025-06-03 05:25:32,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:30:04] 2025-06-03 05:25:33,012 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:30:04] 2025-06-03 05:25:33,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:30:04] 2025-06-03 05:25:33,057 [wrapper] pilotpid: 8962
[2025-06-03 07:30:04] 2025-06-03 05:25:33,079 [wrapper] Pilot exit status: 0
[2025-06-03 07:30:04] 2025-06-03 05:25:33,278 [wrapper] pandaids: 6677386272
[2025-06-03 07:30:04] 2025-06-03 05:25:34,027 [wrapper] cleanup supervisor_pilot 13438 8963
[2025-06-03 07:30:04] 2025-06-03 05:25:34,082 [wrapper] Test setup, not cleaning
[2025-06-03 07:30:04] 2025-06-03 05:25:34,160 [wrapper] apfmon messages muted
[2025-06-03 07:30:04] 2025-06-03 05:25:34,272 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:30:04] 2025-06-03 05:25:34,365 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:30:04]  *** Error codes and diagnostics ***
[2025-06-03 07:30:04]     "exeErrorCode": 0,
[2025-06-03 07:30:04]     "exeErrorDiag": "",
[2025-06-03 07:30:04]     "pilotErrorCode": 0,
[2025-06-03 07:30:04]     "pilotErrorDiag": "",
[2025-06-03 07:30:04]  *** Listing of results directory ***
[2025-06-03 07:30:04] total 392028
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:05 queuedata.json
[2025-06-03 07:30:04] -rwx------. 1 boinc boinc     37140 Jun  2 19:06 runpilot2-wrapper.sh
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:30:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:30 run_atlas
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:30 job.xml
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc      6392 Jun  3 03:30 init_data.xml
[2025-06-03 07:30:04] -rw-r--r--. 2 boinc boinc 214367557 Jun  3 03:30 EVNT.45006593._000194.pool.root.1
[2025-06-03 07:30:04] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:30 start_atlas.sh
[2025-06-03 07:30:04] drwxrwx--x. 2 boinc boinc        68 Jun  3 03:30 shared
[2025-06-03 07:30:04] -rw-r--r--. 2 boinc boinc    508879 Jun  3 03:30 input.tar.gz
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:30 boinc_lockfile
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc      2521 Jun  3 03:30 pandaJob.out
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc    988081 Jun  3 03:33 agis_schedconf.cvmfs.json
[2025-06-03 07:30:04] drwx------. 4 boinc boinc      4096 Jun  3 03:33 pilot3
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc 180136851 Jun  3 07:22 HITS.45006595._004831.pool.root.1
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc       530 Jun  3 07:22 boinc_task_state.xml
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc      1014 Jun  3 07:23 memory_monitor_summary.json
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc   1603667 Jun  3 07:23 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc    370763 Jun  3 07:23 log.45006595._004831.job.log.tgz.1
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc        95 Jun  3 07:25 pilot_heartbeat.json
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc      7685 Jun  3 07:25 heartbeat.json
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc      4540 Jun  3 07:25 pilotlog.txt
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc   1181701 Jun  3 07:25 log.45006595._004831.job.log.1
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc       357 Jun  3 07:25 output.list
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:25 runtime_log
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc   1576960 Jun  3 07:25 result.tar.gz
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc      8673 Jun  3 07:25 runtime_log.err
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc       656 Jun  3 07:25 oJBMDmgnNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzdfKDmdOYyRm.diag
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc      8192 Jun  3 07:30 boinc_mmap_file
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc        28 Jun  3 07:30 wrapper_checkpoint.txt
[2025-06-03 07:30:04] -rw-r--r--. 1 boinc boinc     20617 Jun  3 07:30 stderr.txt
[2025-06-03 07:30:04] HITS file was successfully produced:
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc 180136851 Jun  3 07:22 shared/HITS.pool.root.1
[2025-06-03 07:30:04]  *** Contents of shared directory: ***
[2025-06-03 07:30:04] total 387316
[2025-06-03 07:30:04] -rw-r--r--. 2 boinc boinc 214367557 Jun  3 03:30 ATLAS.root_0
[2025-06-03 07:30:04] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:30 start_atlas.sh
[2025-06-03 07:30:04] -rw-r--r--. 2 boinc boinc    508879 Jun  3 03:30 input.tar.gz
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc 180136851 Jun  3 07:22 HITS.pool.root.1
[2025-06-03 07:30:04] -rw-------. 1 boinc boinc   1576960 Jun  3 07:25 result.tar.gz
07:30:06 (5242): run_atlas exited; CPU time 49546.943124
07:30:06 (5242): called boinc_finish(0)

</stderr_txt>
]]>

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