Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:43:52 (2024998): wrapper (7.7.26015): starting
08:43:52 (2024998): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 08:43:52] Arguments: --nthreads 4
[2025-06-03 08:43:52] Threads: 4
[2025-06-03 08:43:52] Checking for CVMFS
[2025-06-03 08:43:52] No cvmfs_config command found, will try listing directly
[2025-06-03 08:43:52] CVMFS is ok
[2025-06-03 08:43:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 08:43:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 08:43:52] Further information can be found at the LHC@home message board.
[2025-06-03 08:43:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:43:52] Checking for apptainer binary...
[2025-06-03 08:43:52] which: no apptainer in ((null))
[2025-06-03 08:43:52] apptainer is not installed, using version from CVMFS
[2025-06-03 08:43:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:43:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-03 08:43:52] apptainer works
[2025-06-03 08:43:52] Set ATHENA_PROC_NUMBER=4
[2025-06-03 08:43:52] Set ATHENA_CORE_NUMBER=4
[2025-06-03 08:43:52] Starting ATLAS job with PandaID=6677381697
[2025-06-03 08:43:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:13:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:13:20] 2025-06-03 09:12:55,766 | INFO     | executing command: lscpu
[2025-06-03 11:13:20] 2025-06-03 09:12:55,832 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:13:20] 2025-06-03 09:12:56,590 | INFO     | monitor loop #655: job 0:6677381697 is in state 'finished'
[2025-06-03 11:13:20] 2025-06-03 09:12:56,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:13:20] 2025-06-03 09:12:57,083 | INFO     | PID=2028743 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 11:13:20] 2025-06-03 09:12:57,084 | INFO     | .. there are 6 such processes running
[2025-06-03 11:13:20] 2025-06-03 09:12:59,092 | INFO     | monitor loop #656: job 0:6677381697 is in state 'finished'
[2025-06-03 11:13:20] 2025-06-03 09:12:59,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,184 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 11:13:20] 2025-06-03 09:13:00,184 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677381697/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,185 | INFO     | extracted standard info from prmon json
[2025-06-03 11:13:20] 2025-06-03 09:13:00,185 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:13:20] 2025-06-03 09:13:00,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:13:20] 2025-06-03 09:13:00,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:13:20] 2025-06-03 09:13:00,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:13:20] 2025-06-03 09:13:00,189 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:13:20] 2025-06-03 09:13:00,189 | INFO     | sum of square deviations: 964976232.5
[2025-06-03 11:13:20] 2025-06-03 09:13:00,190 | INFO     | sum of deviations: -16035093088.49999
[2025-06-03 11:13:20] 2025-06-03 09:13:00,190 | INFO     | mean x: 1748937490.5
[2025-06-03 11:13:20] 2025-06-03 09:13:00,190 | INFO     | mean y: 2388248.48630137
[2025-06-03 11:13:20] 2025-06-03 09:13:00,191 | INFO     | -- intersect: 29064633018.47349
[2025-06-03 11:13:20] 2025-06-03 09:13:00,191 | INFO     | intersect: 29064633018.47349
[2025-06-03 11:13:20] 2025-06-03 09:13:00,191 | INFO     | chi2: 1.6915130171804018
[2025-06-03 11:13:20] 2025-06-03 09:13:00,191 | INFO     | sum of square deviations: 869188390.0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,192 | INFO     | sum of deviations: -15014201145.000002
[2025-06-03 11:13:20] 2025-06-03 09:13:00,192 | INFO     | mean x: 1748937338.0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,192 | INFO     | mean y: 2389874.5177304964
[2025-06-03 11:13:20] 2025-06-03 09:13:00,192 | INFO     | -- intersect: 30213213310.312653
[2025-06-03 11:13:20] 2025-06-03 09:13:00,193 | INFO     | intersect: 30213213310.312653
[2025-06-03 11:13:20] 2025-06-03 09:13:00,193 | INFO     | chi2: 1.6883956433719978
[2025-06-03 11:13:20] 2025-06-03 09:13:00,193 | INFO     | current chi2=1.6883956433719978 (change=0.18429499369744273 %)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,193 | INFO     | right removable region: 140
[2025-06-03 11:13:20] 2025-06-03 09:13:00,193 | INFO     | sum of square deviations: 869188390.0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,194 | INFO     | sum of deviations: -36212928953.0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,194 | INFO     | mean x: 1748937643.0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,194 | INFO     | mean y: 2419803.9929078016
[2025-06-03 11:13:20] 2025-06-03 09:13:00,194 | INFO     | -- intersect: 72868274131.82887
[2025-06-03 11:13:20] 2025-06-03 09:13:00,194 | INFO     | intersect: 72868274131.82887
[2025-06-03 11:13:20] 2025-06-03 09:13:00,195 | INFO     | chi2: 0.16950900865591648
[2025-06-03 11:13:20] 2025-06-03 09:13:00,195 | INFO     | current chi2=0.16950900865591648 (change=89.97885284155409 %)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,195 | INFO     | sum of square deviations: 779958810.0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,196 | INFO     | sum of deviations: -30823167172.5
[2025-06-03 11:13:20] 2025-06-03 09:13:00,196 | INFO     | mean x: 1748937795.5
[2025-06-03 11:13:20] 2025-06-03 09:13:00,196 | INFO     | mean y: 2410552.6102941176
[2025-06-03 11:13:20] 2025-06-03 09:13:00,196 | INFO     | -- intersect: 69118627144.8687
[2025-06-03 11:13:20] 2025-06-03 09:13:00,196 | INFO     | intersect: 69118627144.8687
[2025-06-03 11:13:20] 2025-06-03 09:13:00,197 | INFO     | chi2: 0.16083675957476204
[2025-06-03 11:13:20] 2025-06-03 09:13:00,197 | INFO     | current chi2=0.16083675957476204 (change=5.116099226772125 %)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,197 | INFO     | left removable region: 20
[2025-06-03 11:13:20] 2025-06-03 09:13:00,197 | INFO     | sum of square deviations: 535786790.0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,198 | INFO     | sum of deviations: -16535946551.000002
[2025-06-03 11:13:20] 2025-06-03 09:13:00,198 | INFO     | mean x: 1748937917.5
[2025-06-03 11:13:20] 2025-06-03 09:13:00,198 | INFO     | mean y: 2387218.783333333
[2025-06-03 11:13:20] 2025-06-03 09:13:00,198 | INFO     | -- intersect: 53979723847.02915
[2025-06-03 11:13:20] 2025-06-03 09:13:00,198 | INFO     | intersect: 53979723847.02915
[2025-06-03 11:13:20] 2025-06-03 09:13:00,198 | INFO     | chi2: 0.09474911691280684
[2025-06-03 11:13:20] 2025-06-03 09:13:00,198 | INFO     | -- intersect: 53979723847.02915
[2025-06-03 11:13:20] 2025-06-03 09:13:00,199 | INFO     | current memory leak: -30.86 B/s (using 120 data points, chi2=0.09)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,199 | INFO     | ..............................
[2025-06-03 11:13:20] 2025-06-03 09:13:00,199 | INFO     | . Timing measurements:
[2025-06-03 11:13:20] 2025-06-03 09:13:00,199 | INFO     | . get job = 0 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,199 | INFO     | . initial setup = 1 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,200 | INFO     | . payload setup = 6 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,200 | INFO     | . stage-in = 0 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,200 | INFO     | . payload execution = 8900 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,200 | INFO     | . stage-out = 0 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,200 | INFO     | . log creation = 0 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,200 | INFO     | ..............................
[2025-06-03 11:13:20] 2025-06-03 09:13:00,307 | INFO     | 
[2025-06-03 11:13:20] 2025-06-03 09:13:00,307 | INFO     | job summary report
[2025-06-03 11:13:20] 2025-06-03 09:13:00,307 | INFO     | --------------------------------------------------
[2025-06-03 11:13:20] 2025-06-03 09:13:00,307 | INFO     | PanDA job id: 6677381697
[2025-06-03 11:13:20] 2025-06-03 09:13:00,307 | INFO     | task id: 45006595
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | errors: (none)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | pilot state: finished 
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | transexitcode: 0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | exeerrorcode: 0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | exeerrordiag: 
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | exitcode: 0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | exitmsg: OK
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | cpuconsumptiontime: 33942 s
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | nevents: 400
[2025-06-03 11:13:20] 2025-06-03 09:13:00,308 | INFO     | neventsw: 0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | pid: 2035892
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | pgrp: 2035892
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | corecount: 4
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | event service: False
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | sizes: {0: 2405017, 1: 2405216, 5: 2405422, 11: 2405478, 8910: 2433441, 8911: 2433440, 8912: 2442587, 8915: 2442643, 8922: 2442813}
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | --------------------------------------------------
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | 
[2025-06-03 11:13:20] 2025-06-03 09:13:00,309 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-03 11:13:20] 2025-06-03 09:13:00,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:13:20] 2025-06-03 09:13:00,333 | INFO     | job 6677381697 has completed (purged errors)
[2025-06-03 11:13:20] 2025-06-03 09:13:00,333 | INFO     | overall cleanup function is called
[2025-06-03 11:13:20] 2025-06-03 09:13:01,341 | INFO     | --- collectZombieJob: --- 10, [2035892]
[2025-06-03 11:13:20] 2025-06-03 09:13:01,341 | INFO     | zombie collector waiting for pid 2035892
[2025-06-03 11:13:20] 2025-06-03 09:13:01,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:13:20] 2025-06-03 09:13:01,342 | INFO     | collected zombie processes
[2025-06-03 11:13:20] 2025-06-03 09:13:01,342 | INFO     | will attempt to kill all subprocesses of pid=2035892
[2025-06-03 11:13:20] 2025-06-03 09:13:01,717 | INFO     | process IDs to be killed: [2035892] (in reverse order)
[2025-06-03 11:13:20] 2025-06-03 09:13:01,830 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:13:20] 2025-06-03 09:13:01,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:13:20] 2025-06-03 09:13:01,842 | INFO     | did not find any defunct processes belonging to 2035892
[2025-06-03 11:13:20] 2025-06-03 09:13:01,853 | INFO     | did not find any defunct processes belonging to 2035892
[2025-06-03 11:13:20] 2025-06-03 09:13:01,854 | INFO     | ready for new job
[2025-06-03 11:13:20] 2025-06-03 09:13:01,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:13:20] 2025-06-03 09:13:01,856 | INFO     | **************************************
[2025-06-03 11:13:20] 2025-06-03 09:13:01,856 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:13:20] 2025-06-03 09:13:01,856 | INFO     | **************************************
[2025-06-03 11:13:20] 2025-06-03 09:13:01,856 | INFO     | 
[2025-06-03 11:13:20] 2025-06-03 09:13:01,861 | INFO     | architecture information:
[2025-06-03 11:13:20] 2025-06-03 09:13:01,861 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:13:20] 2025-06-03 09:13:01,875 | INFO     | cat /etc/os-release:
[2025-06-03 11:13:20] NAME="CentOS Linux"
[2025-06-03 11:13:20] VERSION="7 (Core)"
[2025-06-03 11:13:20] ID="centos"
[2025-06-03 11:13:20] ID_LIKE="rhel fedora"
[2025-06-03 11:13:20] VERSION_ID="7"
[2025-06-03 11:13:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:13:20] ANSI_COLOR="0;31"
[2025-06-03 11:13:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:13:20] HOME_URL="https://www.centos.org/"
[2025-06-03 11:13:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:13:20] 
[2025-06-03 11:13:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:13:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:13:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:13:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:13:20] 
[2025-06-03 11:13:20] 2025-06-03 09:13:01,876 | INFO     | **************************************
[2025-06-03 11:13:20] 2025-06-03 09:13:02,377 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-03 11:13:20] 2025-06-03 09:13:02,395 | INFO     | sufficient remaining disk space (626717097984 B)
[2025-06-03 11:13:20] 2025-06-03 09:13:02,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:13:20] 2025-06-03 09:13:02,396 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:13:20] 2025-06-03 09:13:02,396 | INFO     | update_server=False
[2025-06-03 11:13:20] 2025-06-03 09:13:02,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:13:20] 2025-06-03 09:13:02,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:13:20] 2025-06-03 09:13:02,601 | INFO     | aborting loop
[2025-06-03 11:13:20] 2025-06-03 09:13:02,776 | INFO     | all data control threads have been joined
[2025-06-03 11:13:20] 2025-06-03 09:13:03,099 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:13:20] 2025-06-03 09:13:03,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:13:20] 2025-06-03 09:13:03,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:13:20] 2025-06-03 09:13:03,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:13:20] 2025-06-03 09:13:03,300 | INFO     | all job control threads have been joined
[2025-06-03 11:13:20] 2025-06-03 09:13:03,401 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:03,491 | INFO     | all payload control threads have been joined
[2025-06-03 11:13:20] 2025-06-03 09:13:03,606 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:03,758 | INFO     | [job] validate thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:03,782 | INFO     | [data] control thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:03,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:13:20] 2025-06-03 09:13:03,944 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,002 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,123 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,150 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,156 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,306 | INFO     | [job] control thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,496 | INFO     | [payload] control thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:04,768 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:05,200 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:05,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:13:20] 2025-06-03 09:13:06,323 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:07,869 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:13:20] 2025-06-03 09:13:09,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22722321119040)>', '<ExcThread(monitor, started 22722077742848)>']
[2025-06-03 11:13:20] 2025-06-03 09:13:10,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:13:20] 2025-06-03 09:13:10,133 | INFO     | [monitor] control thread has ended
[2025-06-03 11:13:20] 2025-06-03 09:13:14,918 | INFO     | all workflow threads have been joined
[2025-06-03 11:13:20] 2025-06-03 09:13:14,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:13:20] 2025-06-03 09:13:14,918 | INFO     | traces error code: 0
[2025-06-03 11:13:20] 2025-06-03 09:13:14,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:13:20] 2025-06-03 09:13:15,099 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:13:20] 2025-06-03 09:13:15,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:13:20] 2025-06-03 09:13:15,105 [wrapper] pilotpid: 2028743
[2025-06-03 11:13:20] 2025-06-03 09:13:15,108 [wrapper] Pilot exit status: 0
[2025-06-03 11:13:20] 2025-06-03 09:13:15,120 [wrapper] pandaids: 6677381697
[2025-06-03 11:13:20] 2025-06-03 09:13:15,195 [wrapper] cleanup supervisor_pilot 2281767 2028744
[2025-06-03 11:13:20] 2025-06-03 09:13:15,199 [wrapper] Test setup, not cleaning
[2025-06-03 11:13:20] 2025-06-03 09:13:15,201 [wrapper] apfmon messages muted
[2025-06-03 11:13:20] 2025-06-03 09:13:15,204 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:13:20] 2025-06-03 09:13:15,207 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:13:20]  *** Error codes and diagnostics ***
[2025-06-03 11:13:20]     "exeErrorCode": 0,
[2025-06-03 11:13:20]     "exeErrorDiag": "",
[2025-06-03 11:13:20]     "pilotErrorCode": 0,
[2025-06-03 11:13:20]     "pilotErrorDiag": "",
[2025-06-03 11:13:20]  *** Listing of results directory ***
[2025-06-03 11:13:20] total 393932
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:55 queuedata.json
[2025-06-03 11:13:20] -rwx------ 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc       100 Jun  3 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:13:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 08:43 run_atlas
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc       105 Jun  3 08:43 job.xml
[2025-06-03 11:13:20] -rw-r--r-- 2 boinc boinc 216549361 Jun  3 08:43 EVNT.45006593._000103.pool.root.1
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc      6634 Jun  3 08:43 init_data.xml
[2025-06-03 11:13:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 08:43 start_atlas.sh
[2025-06-03 11:13:20] drwxrwx--x 2 boinc boinc      4096 Jun  3 08:43 shared
[2025-06-03 11:13:20] -rw-r--r-- 2 boinc boinc    508880 Jun  3 08:43 input.tar.gz
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc         0 Jun  3 08:43 boinc_lockfile
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc      2521 Jun  3 08:43 pandaJob.out
[2025-06-03 11:13:20] -rw------- 1 boinc boinc    986901 Jun  3 08:44 agis_schedconf.cvmfs.json
[2025-06-03 11:13:20] -rw------- 1 boinc boinc   1603667 Jun  3 08:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:13:20] drwx------ 4 boinc boinc      4096 Jun  3 08:44 pilot3
[2025-06-03 11:13:20] -rw------- 1 boinc boinc 180721212 Jun  3 11:12 HITS.45006595._002571.pool.root.1
[2025-06-03 11:13:20] -rw------- 1 boinc boinc        95 Jun  3 11:12 pilot_heartbeat.json
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc       528 Jun  3 11:12 boinc_task_state.xml
[2025-06-03 11:13:20] -rw------- 1 boinc boinc      1049 Jun  3 11:12 memory_monitor_summary.json
[2025-06-03 11:13:20] -rw------- 1 boinc boinc    293708 Jun  3 11:12 log.45006595._002571.job.log.tgz.1
[2025-06-03 11:13:20] -rw------- 1 boinc boinc      7726 Jun  3 11:13 heartbeat.json
[2025-06-03 11:13:20] -rw------- 1 boinc boinc      4363 Jun  3 11:13 pilotlog.txt
[2025-06-03 11:13:20] -rw------- 1 boinc boinc    844421 Jun  3 11:13 log.45006595._002571.job.log.1
[2025-06-03 11:13:20] -rw------- 1 boinc boinc       357 Jun  3 11:13 output.list
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc       620 Jun  3 11:13 runtime_log
[2025-06-03 11:13:20] -rw------- 1 boinc boinc   1157120 Jun  3 11:13 result.tar.gz
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc      9025 Jun  3 11:13 runtime_log.err
[2025-06-03 11:13:20] -rw------- 1 boinc boinc       662 Jun  3 11:13 M3RLDmohMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLiVKDme80Uwn.diag
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc        26 Jun  3 11:13 wrapper_checkpoint.txt
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc      8192 Jun  3 11:13 boinc_mmap_file
[2025-06-03 11:13:20] -rw-r--r-- 1 boinc boinc     21008 Jun  3 11:13 stderr.txt
[2025-06-03 11:13:20] HITS file was successfully produced:
[2025-06-03 11:13:20] -rw------- 1 boinc boinc 180721212 Jun  3 11:12 shared/HITS.pool.root.1
[2025-06-03 11:13:20]  *** Contents of shared directory: ***
[2025-06-03 11:13:20] total 389620
[2025-06-03 11:13:20] -rw-r--r-- 2 boinc boinc 216549361 Jun  3 08:43 ATLAS.root_0
[2025-06-03 11:13:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 08:43 start_atlas.sh
[2025-06-03 11:13:20] -rw-r--r-- 2 boinc boinc    508880 Jun  3 08:43 input.tar.gz
[2025-06-03 11:13:20] -rw------- 1 boinc boinc 180721212 Jun  3 11:12 HITS.pool.root.1
[2025-06-03 11:13:20] -rw------- 1 boinc boinc   1157120 Jun  3 11:13 result.tar.gz
11:13:22 (2024998): run_atlas exited; CPU time 34264.412561
11:13:22 (2024998): called boinc_finish(0)

</stderr_txt>
]]>

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