Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:01:00 (21856): wrapper (7.7.26015): starting
00:01:00 (21856): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:01:00] Arguments: --nthreads 8
[2025-06-03 00:01:00] Threads: 8
[2025-06-03 00:01:00] Checking for CVMFS
[2025-06-03 00:01:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:01:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:01:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:01:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:01:02] 2.11.2.0 16161 30889 91880 146718 1 221 24749606 25165824 4309 130560 0 15905741 99.820 16650718 2094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:01:02] CVMFS is ok
[2025-06-03 00:01:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:01:02] Checking for apptainer binary...
[2025-06-03 00:01:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:01:02] Running /usr/bin/apptainer --version
[2025-06-03 00:01:02] apptainer version 1.3.2-1.el7
[2025-06-03 00:01:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 00:01:05] cg-vwn420.simple-grid.lan
[2025-06-03 00:01:05] apptainer works
[2025-06-03 00:01:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 00:01:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 00:01:05] Starting ATLAS job with PandaID=6677380253
[2025-06-03 00:01:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:47:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:47:29] 2025-06-03 01:47:03,941 | INFO     | monitor loop #955: job 0:6677380253 is in state 'finished'
[2025-06-03 03:47:29] 2025-06-03 01:47:03,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:47:29] 2025-06-03 01:47:06,444 | INFO     | monitor loop #956: job 0:6677380253 is in state 'finished'
[2025-06-03 03:47:29] 2025-06-03 01:47:06,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:47:29] 2025-06-03 01:47:07,910 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 03:47:29] 2025-06-03 01:47:07,911 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677380253/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:47:29] 2025-06-03 01:47:07,912 | INFO     | extracted standard info from prmon json
[2025-06-03 03:47:29] 2025-06-03 01:47:07,912 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:47:29] 2025-06-03 01:47:07,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:47:29] 2025-06-03 01:47:07,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:47:29] 2025-06-03 01:47:07,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:47:29] 2025-06-03 01:47:07,918 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:47:29] 2025-06-03 01:47:07,918 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,920 | INFO     | sum of deviations: -238973173.00000018
[2025-06-03 03:47:29] 2025-06-03 01:47:07,921 | INFO     | mean x: 1748908540.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,921 | INFO     | mean y: 2498027.7419354836
[2025-06-03 03:47:29] 2025-06-03 01:47:07,921 | INFO     | -- intersect: 134405028.56647506
[2025-06-03 03:47:29] 2025-06-03 01:47:07,921 | INFO     | intersect: 134405028.56647506
[2025-06-03 03:47:29] 2025-06-03 01:47:07,922 | INFO     | chi2: 1.848606368011532
[2025-06-03 03:47:29] 2025-06-03 01:47:07,922 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,924 | INFO     | sum of deviations: -153040490.50000036
[2025-06-03 03:47:29] 2025-06-03 01:47:07,924 | INFO     | mean x: 1748908387.5
[2025-06-03 03:47:29] 2025-06-03 01:47:07,924 | INFO     | mean y: 2498088.9858490564
[2025-06-03 03:47:29] 2025-06-03 01:47:07,924 | INFO     | -- intersect: 93091594.68317711
[2025-06-03 03:47:29] 2025-06-03 01:47:07,924 | INFO     | intersect: 93091594.68317711
[2025-06-03 03:47:29] 2025-06-03 01:47:07,925 | INFO     | chi2: 1.8487443957796517
[2025-06-03 03:47:29] 2025-06-03 01:47:07,925 | INFO     | current chi2=1.8487443957796517 (change=-0.0074665851263957085 %)
[2025-06-03 03:47:29] 2025-06-03 01:47:07,925 | INFO     | right removable region: 211
[2025-06-03 03:47:29] 2025-06-03 01:47:07,926 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,928 | INFO     | sum of deviations: -37485406947.99999
[2025-06-03 03:47:29] 2025-06-03 01:47:07,928 | INFO     | mean x: 1748908692.5
[2025-06-03 03:47:29] 2025-06-03 01:47:07,928 | INFO     | mean y: 2524331.047169811
[2025-06-03 03:47:29] 2025-06-03 01:47:07,928 | INFO     | -- intersect: 22192305669.617622
[2025-06-03 03:47:29] 2025-06-03 01:47:07,928 | INFO     | intersect: 22192305669.617622
[2025-06-03 03:47:29] 2025-06-03 01:47:07,929 | INFO     | chi2: 0.1995101822625959
[2025-06-03 03:47:29] 2025-06-03 01:47:07,929 | INFO     | current chi2=0.1995101822625959 (change=89.20753570284404 %)
[2025-06-03 03:47:29] 2025-06-03 01:47:07,929 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,931 | INFO     | sum of deviations: -36282338900.99998
[2025-06-03 03:47:29] 2025-06-03 01:47:07,932 | INFO     | mean x: 1748908845.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,932 | INFO     | mean y: 2523394.236714976
[2025-06-03 03:47:29] 2025-06-03 01:47:07,932 | INFO     | -- intersect: 23074410874.140812
[2025-06-03 03:47:29] 2025-06-03 01:47:07,932 | INFO     | intersect: 23074410874.140812
[2025-06-03 03:47:29] 2025-06-03 01:47:07,932 | INFO     | chi2: 0.18631285681854978
[2025-06-03 03:47:29] 2025-06-03 01:47:07,933 | INFO     | current chi2=0.18631285681854978 (change=6.614863108428098 %)
[2025-06-03 03:47:29] 2025-06-03 01:47:07,933 | INFO     | left removable region: 20
[2025-06-03 03:47:29] 2025-06-03 01:47:07,933 | INFO     | sum of square deviations: 2160561440.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,935 | INFO     | sum of deviations: -22302190785.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,935 | INFO     | mean x: 1748908967.0
[2025-06-03 03:47:29] 2025-06-03 01:47:07,935 | INFO     | mean y: 2513166.54973822
[2025-06-03 03:47:29] 2025-06-03 01:47:07,935 | INFO     | -- intersect: 18055460296.63981
[2025-06-03 03:47:29] 2025-06-03 01:47:07,935 | INFO     | intersect: 18055460296.63981
[2025-06-03 03:47:29] 2025-06-03 01:47:07,936 | INFO     | chi2: 0.1537887023362009
[2025-06-03 03:47:29] 2025-06-03 01:47:07,936 | INFO     | -- intersect: 18055460296.63981
[2025-06-03 03:47:29] 2025-06-03 01:47:07,936 | INFO     | current memory leak: -10.32 B/s (using 191 data points, chi2=0.15)
[2025-06-03 03:47:29] 2025-06-03 01:47:07,937 | INFO     | ..............................
[2025-06-03 03:47:29] 2025-06-03 01:47:07,937 | INFO     | . Timing measurements:
[2025-06-03 03:47:29] 2025-06-03 01:47:07,937 | INFO     | . get job = 0 s
[2025-06-03 03:47:29] 2025-06-03 01:47:07,937 | INFO     | . initial setup = 2 s
[2025-06-03 03:47:29] 2025-06-03 01:47:07,938 | INFO     | . payload setup = 60 s
[2025-06-03 03:47:29] 2025-06-03 01:47:07,938 | INFO     | . stage-in = 0 s
[2025-06-03 03:47:29] 2025-06-03 01:47:07,938 | INFO     | . payload execution = 13304 s
[2025-06-03 03:47:29] 2025-06-03 01:47:07,938 | INFO     | . stage-out = 3 s
[2025-06-03 03:47:29] 2025-06-03 01:47:07,938 | INFO     | . log creation = 0 s
[2025-06-03 03:47:29] 2025-06-03 01:47:07,938 | INFO     | ..............................
[2025-06-03 03:47:29] 2025-06-03 01:47:08,080 | INFO     | 
[2025-06-03 03:47:29] 2025-06-03 01:47:08,080 | INFO     | job summary report
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | --------------------------------------------------
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | PanDA job id: 6677380253
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | task id: 45006595
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | errors: (none)
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | pilot state: finished 
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | transexitcode: 0
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | exeerrorcode: 0
[2025-06-03 03:47:29] 2025-06-03 01:47:08,081 | INFO     | exeerrordiag: 
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | exitcode: 0
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | exitmsg: OK
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | cpuconsumptiontime: 47696 s
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | nevents: 400
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | neventsw: 0
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | pid: 787
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | pgrp: 787
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | corecount: 8
[2025-06-03 03:47:29] 2025-06-03 01:47:08,082 | INFO     | event service: False
[2025-06-03 03:47:29] 2025-06-03 01:47:08,083 | INFO     | sizes: {0: 2405005, 1: 2405204, 12: 2405204, 23: 2405232, 34: 2405260, 37: 2405494, 44: 2405650, 13369: 2435251, 13373: 2444192, 13374: 2444248, 13412: 2444418}
[2025-06-03 03:47:29] 2025-06-03 01:47:08,083 | INFO     | --------------------------------------------------
[2025-06-03 03:47:29] 2025-06-03 01:47:08,083 | INFO     | 
[2025-06-03 03:47:29] 2025-06-03 01:47:08,083 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 03:47:29] 2025-06-03 01:47:08,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:47:29] 2025-06-03 01:47:08,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:47:29] 2025-06-03 01:47:08,562 | INFO     | job 6677380253 has completed (purged errors)
[2025-06-03 03:47:29] 2025-06-03 01:47:08,562 | INFO     | overall cleanup function is called
[2025-06-03 03:47:29] 2025-06-03 01:47:09,572 | INFO     | --- collectZombieJob: --- 10, [787]
[2025-06-03 03:47:29] 2025-06-03 01:47:09,572 | INFO     | zombie collector waiting for pid 787
[2025-06-03 03:47:29] 2025-06-03 01:47:09,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:47:29] 2025-06-03 01:47:09,572 | INFO     | collected zombie processes
[2025-06-03 03:47:29] 2025-06-03 01:47:09,572 | INFO     | will attempt to kill all subprocesses of pid=787
[2025-06-03 03:47:29] 2025-06-03 01:47:09,676 | INFO     | process IDs to be killed: [787] (in reverse order)
[2025-06-03 03:47:29] 2025-06-03 01:47:09,741 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:47:29] 2025-06-03 01:47:09,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:47:29] 2025-06-03 01:47:09,745 | INFO     | did not find any defunct processes belonging to 787
[2025-06-03 03:47:29] 2025-06-03 01:47:09,748 | INFO     | did not find any defunct processes belonging to 787
[2025-06-03 03:47:29] 2025-06-03 01:47:09,749 | INFO     | ready for new job
[2025-06-03 03:47:29] 2025-06-03 01:47:09,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:47:29] 2025-06-03 01:47:09,751 | INFO     | **************************************
[2025-06-03 03:47:29] 2025-06-03 01:47:09,751 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:47:29] 2025-06-03 01:47:09,751 | INFO     | **************************************
[2025-06-03 03:47:29] 2025-06-03 01:47:09,751 | INFO     | 
[2025-06-03 03:47:29] 2025-06-03 01:47:09,752 | INFO     | pilot is running in a VM
[2025-06-03 03:47:29] 2025-06-03 01:47:09,752 | INFO     | architecture information:
[2025-06-03 03:47:29] 2025-06-03 01:47:09,752 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:47:29] 2025-06-03 01:47:09,859 | INFO     | cat /etc/os-release:
[2025-06-03 03:47:29] NAME="CentOS Linux"
[2025-06-03 03:47:29] VERSION="7 (Core)"
[2025-06-03 03:47:29] ID="centos"
[2025-06-03 03:47:29] ID_LIKE="rhel fedora"
[2025-06-03 03:47:29] VERSION_ID="7"
[2025-06-03 03:47:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:47:29] ANSI_COLOR="0;31"
[2025-06-03 03:47:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:47:29] HOME_URL="https://www.centos.org/"
[2025-06-03 03:47:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:47:29] 
[2025-06-03 03:47:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:47:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:47:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:47:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:47:29] 
[2025-06-03 03:47:29] 2025-06-03 01:47:09,859 | INFO     | **************************************
[2025-06-03 03:47:29] 2025-06-03 01:47:10,364 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 03:47:29] 2025-06-03 01:47:10,515 | INFO     | sufficient remaining disk space (496663265280 B)
[2025-06-03 03:47:29] 2025-06-03 01:47:10,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:47:29] 2025-06-03 01:47:10,516 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:47:29] 2025-06-03 01:47:10,516 | INFO     | update_server=False
[2025-06-03 03:47:29] 2025-06-03 01:47:10,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:47:29] 2025-06-03 01:47:10,516 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 03:47:29] 2025-06-03 01:47:10,517 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:47:29] 2025-06-03 01:47:10,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:47:29] 2025-06-03 01:47:10,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:47:29] 2025-06-03 01:47:10,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:47:29] 2025-06-03 01:47:10,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:47:29] 2025-06-03 01:47:10,523 | INFO     | aborting loop
[2025-06-03 03:47:29] 2025-06-03 01:47:10,698 | INFO     | all payload control threads have been joined
[2025-06-03 03:47:29] 2025-06-03 01:47:11,327 | INFO     | all data control threads have been joined
[2025-06-03 03:47:29] 2025-06-03 01:47:11,522 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:11,530 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:11,557 | INFO     | all job control threads have been joined
[2025-06-03 03:47:29] 2025-06-03 01:47:11,638 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:11,704 | INFO     | [payload] control thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:11,818 | INFO     | [job] validate thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,103 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,242 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,299 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,312 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,333 | INFO     | [data] control thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,527 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,563 | INFO     | [job] control thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:12,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:47:29] 2025-06-03 01:47:12,862 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:13,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:47:29] 2025-06-03 01:47:14,102 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:16,425 [wrapper] supervise_pilot (15 min periods counter: 16)
[2025-06-03 03:47:29] 2025-06-03 01:47:16,609 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:21,403 | INFO     | job.realtimelogging is not enabled
[2025-06-03 03:47:29] 2025-06-03 01:47:22,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:47:29] 2025-06-03 01:47:22,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977368790848)>', '<ExcThread(monitor, started 139976918419200)>']
[2025-06-03 03:47:29] 2025-06-03 01:47:23,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:47:29] 2025-06-03 01:47:23,595 | INFO     | [monitor] control thread has ended
[2025-06-03 03:47:29] 2025-06-03 01:47:27,837 | INFO     | all workflow threads have been joined
[2025-06-03 03:47:29] 2025-06-03 01:47:27,837 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:47:29] 2025-06-03 01:47:27,837 | INFO     | traces error code: 0
[2025-06-03 03:47:29] 2025-06-03 01:47:27,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:47:29] 2025-06-03 01:47:28,071 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:47:29] 2025-06-03 01:47:28,082 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:47:29] 2025-06-03 01:47:28,089 [wrapper] pilotpid: 25818
[2025-06-03 03:47:29] 2025-06-03 01:47:28,166 [wrapper] Pilot exit status: 0
[2025-06-03 03:47:29] 2025-06-03 01:47:28,427 [wrapper] pandaids: 6677380253
[2025-06-03 03:47:29] 2025-06-03 01:47:28,556 [wrapper] cleanup supervisor_pilot 22138 25819
[2025-06-03 03:47:29] 2025-06-03 01:47:28,631 [wrapper] Test setup, not cleaning
[2025-06-03 03:47:29] 2025-06-03 01:47:28,673 [wrapper] apfmon messages muted
[2025-06-03 03:47:29] 2025-06-03 01:47:28,731 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:47:29] 2025-06-03 01:47:28,769 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:47:29]  *** Error codes and diagnostics ***
[2025-06-03 03:47:29]     "exeErrorCode": 0,
[2025-06-03 03:47:29]     "exeErrorDiag": "",
[2025-06-03 03:47:29]     "pilotErrorCode": 0,
[2025-06-03 03:47:29]     "pilotErrorDiag": "",
[2025-06-03 03:47:29]  *** Listing of results directory ***
[2025-06-03 03:47:29] total 391072
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 03:47:29] -rwx------. 1 boinc boinc     37140 Jun  2 17:51 runpilot2-wrapper.sh
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:53 queuedata.json
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:47:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:01 run_atlas
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:01 job.xml
[2025-06-03 03:47:29] -rw-r--r--. 2 boinc boinc 217498080 Jun  3 00:01 EVNT.45006593._000080.pool.root.1
[2025-06-03 03:47:29] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:01 start_atlas.sh
[2025-06-03 03:47:29] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:01 shared
[2025-06-03 03:47:29] -rw-r--r--. 2 boinc boinc    508872 Jun  3 00:01 input.tar.gz
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc      6392 Jun  3 00:01 init_data.xml
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:01 boinc_lockfile
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc      2521 Jun  3 00:01 pandaJob.out
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc    987975 Jun  3 00:02 agis_schedconf.cvmfs.json
[2025-06-03 03:47:29] drwx------. 4 boinc boinc      4096 Jun  3 00:02 pilot3
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc 176021644 Jun  3 03:45 HITS.45006595._001994.pool.root.1
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc       531 Jun  3 03:45 boinc_task_state.xml
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc      1014 Jun  3 03:46 memory_monitor_summary.json
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc        95 Jun  3 03:46 pilot_heartbeat.json
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc   1603667 Jun  3 03:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc    386481 Jun  3 03:46 log.45006595._001994.job.log.tgz.1
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:47 boinc_mmap_file
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:47 wrapper_checkpoint.txt
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc      7680 Jun  3 03:47 heartbeat.json
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc      4611 Jun  3 03:47 pilotlog.txt
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc   1166863 Jun  3 03:47 log.45006595._001994.job.log.1
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc       357 Jun  3 03:47 output.list
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc       620 Jun  3 03:47 runtime_log
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc   1576960 Jun  3 03:47 result.tar.gz
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc       656 Jun  3 03:47 bucLDmscMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAAfKDmWoOTlm.diag
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc      8659 Jun  3 03:47 runtime_log.err
[2025-06-03 03:47:29] -rw-r--r--. 1 boinc boinc     20725 Jun  3 03:47 stderr.txt
[2025-06-03 03:47:29] HITS file was successfully produced:
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc 176021644 Jun  3 03:45 shared/HITS.pool.root.1
[2025-06-03 03:47:29]  *** Contents of shared directory: ***
[2025-06-03 03:47:29] total 386360
[2025-06-03 03:47:29] -rw-r--r--. 2 boinc boinc 217498080 Jun  3 00:01 ATLAS.root_0
[2025-06-03 03:47:29] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:01 start_atlas.sh
[2025-06-03 03:47:29] -rw-r--r--. 2 boinc boinc    508872 Jun  3 00:01 input.tar.gz
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc 176021644 Jun  3 03:45 HITS.pool.root.1
[2025-06-03 03:47:29] -rw-------. 1 boinc boinc   1576960 Jun  3 03:47 result.tar.gz
03:47:30 (21856): run_atlas exited; CPU time 47872.735957
03:47:30 (21856): called boinc_finish(0)

</stderr_txt>
]]>

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