Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:08:30 (7407): wrapper (7.7.26015): starting
20:08:30 (7407): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:08:30] Arguments: --nthreads 8
[2025-06-02 20:08:30] Threads: 8
[2025-06-02 20:08:30] Checking for CVMFS
[2025-06-02 20:08:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:08:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:08:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:08:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:08:34] 2.11.2.0 16161 30656 92264 146714 2 232 24488567 25165824 4274 130560 0 15644689 99.820 16588414 2088 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:08:34] CVMFS is ok
[2025-06-02 20:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:08:34] Checking for apptainer binary...
[2025-06-02 20:08:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:08:34] Running /usr/bin/apptainer --version
[2025-06-02 20:08:34] apptainer version 1.3.2-1.el7
[2025-06-02 20:08:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:08:48] cg-vwn420.simple-grid.lan
[2025-06-02 20:08:48] apptainer works
[2025-06-02 20:08:48] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:08:48] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:08:48] Starting ATLAS job with PandaID=6677381685
[2025-06-02 20:08:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 00:00:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 00:00:56] 2025-06-02 22:00:33,646 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:00:56] 2025-06-02 22:00:33,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:00:56] 2025-06-02 22:00:33,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:00:56] 2025-06-02 22:00:33,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:00:56] 2025-06-02 22:00:33,651 | INFO     | fitting pss+swap vs Time
[2025-06-03 00:00:56] 2025-06-02 22:00:33,652 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,654 | INFO     | sum of deviations: 36161511625.99995
[2025-06-03 00:00:56] 2025-06-02 22:00:33,654 | INFO     | mean x: 1748894876.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,654 | INFO     | mean y: 2477950.392694064
[2025-06-03 00:00:56] 2025-06-02 22:00:33,654 | INFO     | -- intersect: -19415704113.15457
[2025-06-03 00:00:56] 2025-06-02 22:00:33,654 | INFO     | intersect: -19415704113.15457
[2025-06-03 00:00:56] 2025-06-02 22:00:33,655 | INFO     | chi2: 2.0514932134969657
[2025-06-03 00:00:56] 2025-06-02 22:00:33,655 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 00:00:56] 2025-06-02 22:00:33,657 | INFO     | sum of deviations: 35390566694.500015
[2025-06-03 00:00:56] 2025-06-02 22:00:33,657 | INFO     | mean x: 1748894723.5
[2025-06-03 00:00:56] 2025-06-02 22:00:33,657 | INFO     | mean y: 2477411.0607476635
[2025-06-03 00:00:56] 2025-06-02 22:00:33,657 | INFO     | -- intersect: -20365172600.755547
[2025-06-03 00:00:56] 2025-06-02 22:00:33,657 | INFO     | intersect: -20365172600.755547
[2025-06-03 00:00:56] 2025-06-02 22:00:33,658 | INFO     | chi2: 2.0529027950273533
[2025-06-03 00:00:56] 2025-06-02 22:00:33,658 | INFO     | current chi2=2.0529027950273533 (change=-0.06871002648772354 %)
[2025-06-03 00:00:56] 2025-06-02 22:00:33,658 | INFO     | right removable region: 213
[2025-06-03 00:00:56] 2025-06-02 22:00:33,658 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 00:00:56] 2025-06-02 22:00:33,660 | INFO     | sum of deviations: -9258385897.999998
[2025-06-03 00:00:56] 2025-06-02 22:00:33,660 | INFO     | mean x: 1748895028.5
[2025-06-03 00:00:56] 2025-06-02 22:00:33,660 | INFO     | mean y: 2509518.3738317755
[2025-06-03 00:00:56] 2025-06-02 22:00:33,660 | INFO     | -- intersect: 5330810648.974409
[2025-06-03 00:00:56] 2025-06-02 22:00:33,660 | INFO     | intersect: 5330810648.974409
[2025-06-03 00:00:56] 2025-06-02 22:00:33,661 | INFO     | chi2: 0.07443769855755177
[2025-06-03 00:00:56] 2025-06-02 22:00:33,661 | INFO     | current chi2=0.07443769855755177 (change=96.37153571516498 %)
[2025-06-03 00:00:56] 2025-06-02 22:00:33,661 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,663 | INFO     | sum of deviations: -15461546108.999998
[2025-06-03 00:00:56] 2025-06-02 22:00:33,663 | INFO     | mean x: 1748895181.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,663 | INFO     | mean y: 2514030.234449761
[2025-06-03 00:00:56] 2025-06-02 22:00:33,663 | INFO     | -- intersect: 9554844993.532526
[2025-06-03 00:00:56] 2025-06-02 22:00:33,663 | INFO     | intersect: 9554844993.532526
[2025-06-03 00:00:56] 2025-06-02 22:00:33,664 | INFO     | chi2: 0.02477069922282411
[2025-06-03 00:00:56] 2025-06-02 22:00:33,664 | INFO     | current chi2=0.02477069922282411 (change=66.72291096738763 %)
[2025-06-03 00:00:56] 2025-06-02 22:00:33,664 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | sum of deviations: -14895303422.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | mean x: 1748895333.5
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | mean y: 2513590.745098039
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | -- intersect: 9898399575.431797
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | intersect: 9898399575.431797
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | chi2: 0.024421299331508495
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | current chi2=0.024421299331508495 (change=1.4105370549801548 %)
[2025-06-03 00:00:56] 2025-06-02 22:00:33,666 | INFO     | left removable region: 30
[2025-06-03 00:00:56] 2025-06-02 22:00:33,667 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,668 | INFO     | sum of deviations: -9555351466.000006
[2025-06-03 00:00:56] 2025-06-02 22:00:33,668 | INFO     | mean x: 1748895608.0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,668 | INFO     | mean y: 2509531.9344262294
[2025-06-03 00:00:56] 2025-06-02 22:00:33,668 | INFO     | -- intersect: 8796618210.255394
[2025-06-03 00:00:56] 2025-06-02 22:00:33,668 | INFO     | intersect: 8796618210.255394
[2025-06-03 00:00:56] 2025-06-02 22:00:33,669 | INFO     | chi2: 0.022337871471512977
[2025-06-03 00:00:56] 2025-06-02 22:00:33,669 | INFO     | -- intersect: 8796618210.255394
[2025-06-03 00:00:56] 2025-06-02 22:00:33,669 | INFO     | current memory leak: -5.03 B/s (using 183 data points, chi2=0.02)
[2025-06-03 00:00:56] 2025-06-02 22:00:33,670 | INFO     | ..............................
[2025-06-03 00:00:56] 2025-06-02 22:00:33,670 | INFO     | . Timing measurements:
[2025-06-03 00:00:56] 2025-06-02 22:00:33,670 | INFO     | . get job = 0 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,670 | INFO     | . initial setup = 10 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,670 | INFO     | . payload setup = 72 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,670 | INFO     | . stage-in = 0 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,671 | INFO     | . payload execution = 13412 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,671 | INFO     | . stage-out = 2 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,671 | INFO     | . log creation = 0 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,671 | INFO     | ..............................
[2025-06-03 00:00:56] 2025-06-02 22:00:33,994 | INFO     | 
[2025-06-03 00:00:56] 2025-06-02 22:00:33,994 | INFO     | job summary report
[2025-06-03 00:00:56] 2025-06-02 22:00:33,994 | INFO     | --------------------------------------------------
[2025-06-03 00:00:56] 2025-06-02 22:00:33,994 | INFO     | PanDA job id: 6677381685
[2025-06-03 00:00:56] 2025-06-02 22:00:33,994 | INFO     | task id: 45006595
[2025-06-03 00:00:56] 2025-06-02 22:00:33,994 | INFO     | errors: (none)
[2025-06-03 00:00:56] 2025-06-02 22:00:33,994 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | pilot state: finished 
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | transexitcode: 0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | exeerrorcode: 0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | exeerrordiag: 
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | exitcode: 0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | exitmsg: OK
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | cpuconsumptiontime: 49957 s
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | nevents: 400
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | neventsw: 0
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | pid: 24107
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | pgrp: 24107
[2025-06-03 00:00:56] 2025-06-02 22:00:33,995 | INFO     | corecount: 8
[2025-06-03 00:00:56] 2025-06-02 22:00:33,996 | INFO     | event service: False
[2025-06-03 00:00:56] 2025-06-02 22:00:33,996 | INFO     | sizes: {0: 2404950, 1: 2405205, 12: 2405205, 23: 2405233, 33: 2405261, 44: 2405317, 55: 2405473, 66: 2405501, 76: 2405529, 87: 2405585, 94: 2405819, 98: 2406127, 1
[2025-06-03 00:00:56] 2025-06-02 22:00:33,996 | INFO     | --------------------------------------------------
[2025-06-03 00:00:56] 2025-06-02 22:00:33,996 | INFO     | 
[2025-06-03 00:00:56] 2025-06-02 22:00:33,996 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 00:00:56] 2025-06-02 22:00:34,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 00:00:56] 2025-06-02 22:00:34,130 | INFO     | job 6677381685 has completed (purged errors)
[2025-06-03 00:00:56] 2025-06-02 22:00:34,130 | INFO     | overall cleanup function is called
[2025-06-03 00:00:56] 2025-06-02 22:00:35,138 | INFO     | --- collectZombieJob: --- 10, [24107]
[2025-06-03 00:00:56] 2025-06-02 22:00:35,138 | INFO     | zombie collector waiting for pid 24107
[2025-06-03 00:00:56] 2025-06-02 22:00:35,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 00:00:56] 2025-06-02 22:00:35,138 | INFO     | collected zombie processes
[2025-06-03 00:00:56] 2025-06-02 22:00:35,138 | INFO     | will attempt to kill all subprocesses of pid=24107
[2025-06-03 00:00:56] 2025-06-02 22:00:35,254 | INFO     | process IDs to be killed: [24107] (in reverse order)
[2025-06-03 00:00:56] 2025-06-02 22:00:35,358 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 00:00:56] 2025-06-02 22:00:35,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 00:00:56] 2025-06-02 22:00:35,362 | INFO     | did not find any defunct processes belonging to 24107
[2025-06-03 00:00:56] 2025-06-02 22:00:35,366 | INFO     | did not find any defunct processes belonging to 24107
[2025-06-03 00:00:56] 2025-06-02 22:00:35,366 | INFO     | ready for new job
[2025-06-03 00:00:56] 2025-06-02 22:00:35,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 00:00:56] 2025-06-02 22:00:35,368 | INFO     | **************************************
[2025-06-03 00:00:56] 2025-06-02 22:00:35,369 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 00:00:56] 2025-06-02 22:00:35,369 | INFO     | **************************************
[2025-06-03 00:00:56] 2025-06-02 22:00:35,369 | INFO     | 
[2025-06-03 00:00:56] 2025-06-02 22:00:35,369 | INFO     | pilot is running in a VM
[2025-06-03 00:00:56] 2025-06-02 22:00:35,370 | INFO     | architecture information:
[2025-06-03 00:00:56] 2025-06-02 22:00:35,370 | INFO     | executing command: cat /etc/os-release
[2025-06-03 00:00:56] 2025-06-02 22:00:35,397 | INFO     | cat /etc/os-release:
[2025-06-03 00:00:56] NAME="CentOS Linux"
[2025-06-03 00:00:56] VERSION="7 (Core)"
[2025-06-03 00:00:56] ID="centos"
[2025-06-03 00:00:56] ID_LIKE="rhel fedora"
[2025-06-03 00:00:56] VERSION_ID="7"
[2025-06-03 00:00:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 00:00:56] ANSI_COLOR="0;31"
[2025-06-03 00:00:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 00:00:56] HOME_URL="https://www.centos.org/"
[2025-06-03 00:00:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 00:00:56] 
[2025-06-03 00:00:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 00:00:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 00:00:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 00:00:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 00:00:56] 
[2025-06-03 00:00:56] 2025-06-02 22:00:35,398 | INFO     | **************************************
[2025-06-03 00:00:56] 2025-06-02 22:00:35,904 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 00:00:56] 2025-06-02 22:00:36,028 | INFO     | sufficient remaining disk space (496935895040 B)
[2025-06-03 00:00:56] 2025-06-02 22:00:36,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 00:00:56] 2025-06-02 22:00:36,029 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 00:00:56] 2025-06-02 22:00:36,029 | INFO     | update_server=False
[2025-06-03 00:00:56] 2025-06-02 22:00:36,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 00:00:56] 2025-06-02 22:00:36,029 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 00:00:56] 2025-06-02 22:00:36,034 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 00:00:56] 2025-06-02 22:00:36,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 00:00:56] 2025-06-02 22:00:36,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 00:00:56] 2025-06-02 22:00:36,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 00:00:56] 2025-06-02 22:00:36,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 00:00:56] 2025-06-02 22:00:36,143 | INFO     | all data control threads have been joined
[2025-06-03 00:00:56] 2025-06-02 22:00:36,168 | INFO     | all job control threads have been joined
[2025-06-03 00:00:56] 2025-06-02 22:00:36,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:00:56] 2025-06-02 22:00:36,197 | INFO     | aborting loop
[2025-06-03 00:00:56] 2025-06-02 22:00:36,801 | INFO     | all payload control threads have been joined
[2025-06-03 00:00:56] 2025-06-02 22:00:37,035 | INFO     | [job] retrieve thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,071 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,094 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,149 | INFO     | [data] control thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,174 | INFO     | [job] control thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,203 | INFO     | [job] job monitor thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,271 | INFO     | [payload] validate_post thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,500 | INFO     | [job] validate thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:37,807 | INFO     | [payload] control thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:38,044 | INFO     | [data] copytool_out thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:38,074 | INFO     | [data] copytool_in thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:38,145 | INFO     | [payload] failed_post thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:38,481 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:38,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:00:56] 2025-06-02 22:00:39,843 | INFO     | [job] queue monitor thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:40,046 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:46,853 | INFO     | job.realtimelogging is not enabled
[2025-06-03 00:00:56] 2025-06-02 22:00:47,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 00:00:56] 2025-06-02 22:00:48,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140584077903680)>', '<ExcThread(monitor, started 140583272183552)>']
[2025-06-03 00:00:56] 2025-06-02 22:00:49,110 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 00:00:56] 2025-06-02 22:00:49,110 | INFO     | [monitor] control thread has ended
[2025-06-03 00:00:56] 2025-06-02 22:00:53,847 | INFO     | all workflow threads have been joined
[2025-06-03 00:00:56] 2025-06-02 22:00:53,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 00:00:56] 2025-06-02 22:00:53,847 | INFO     | traces error code: 0
[2025-06-03 00:00:56] 2025-06-02 22:00:53,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 00:00:56] 2025-06-02 22:00:54,087 [wrapper] ==== pilot stdout END ====
[2025-06-03 00:00:56] 2025-06-02 22:00:54,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 00:00:56] 2025-06-02 22:00:54,212 [wrapper] pilotpid: 15405
[2025-06-03 00:00:56] 2025-06-02 22:00:54,345 [wrapper] Pilot exit status: 0
[2025-06-03 00:00:56] 2025-06-02 22:00:54,892 [wrapper] pandaids: 6677381685
[2025-06-03 00:00:56] 2025-06-02 22:00:54,951 [wrapper] cleanup supervisor_pilot 18890 15406
[2025-06-03 00:00:56] 2025-06-02 22:00:54,961 [wrapper] Test setup, not cleaning
[2025-06-03 00:00:56] 2025-06-02 22:00:54,972 [wrapper] apfmon messages muted
[2025-06-03 00:00:56] 2025-06-02 22:00:54,977 [wrapper] ==== wrapper stdout END ====
[2025-06-03 00:00:56] 2025-06-02 22:00:54,987 [wrapper] ==== wrapper stderr END ====
[2025-06-03 00:00:56]  *** Error codes and diagnostics ***
[2025-06-03 00:00:56]     "exeErrorCode": 0,
[2025-06-03 00:00:56]     "exeErrorDiag": "",
[2025-06-03 00:00:56]     "pilotErrorCode": 0,
[2025-06-03 00:00:56]     "pilotErrorDiag": "",
[2025-06-03 00:00:56]  *** Listing of results directory ***
[2025-06-03 00:00:56] total 394676
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:55 queuedata.json
[2025-06-03 00:00:56] -rwx------. 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 00:00:56] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:08 run_atlas
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:08 job.xml
[2025-06-03 00:00:56] -rw-r--r--. 2 boinc boinc 216549361 Jun  2 20:08 EVNT.45006593._000103.pool.root.1
[2025-06-03 00:00:56] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:08 shared
[2025-06-03 00:00:56] -rw-r--r--. 2 boinc boinc    508881 Jun  2 20:08 input.tar.gz
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc      6392 Jun  2 20:08 init_data.xml
[2025-06-03 00:00:56] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:08 start_atlas.sh
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:08 boinc_lockfile
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc      2521 Jun  2 20:08 pandaJob.out
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc    988298 Jun  2 20:11 agis_schedconf.cvmfs.json
[2025-06-03 00:00:56] drwx------. 4 boinc boinc      4096 Jun  2 20:12 pilot3
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc 180634300 Jun  2 23:59 HITS.45006595._002559.pool.root.1
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc      1019 Jun  2 23:59 memory_monitor_summary.json
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc       531 Jun  2 23:59 boinc_task_state.xml
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc   1603667 Jun  2 23:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc    377903 Jun  2 23:59 log.45006595._002559.job.log.tgz.1
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc        95 Jun  3 00:00 pilot_heartbeat.json
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc      7689 Jun  3 00:00 heartbeat.json
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc      8192 Jun  3 00:00 boinc_mmap_file
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc        28 Jun  3 00:00 wrapper_checkpoint.txt
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc      4611 Jun  3 00:00 pilotlog.txt
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc   1187758 Jun  3 00:00 log.45006595._002559.job.log.1
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc       357 Jun  3 00:00 output.list
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc       620 Jun  3 00:00 runtime_log
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc   1587200 Jun  3 00:00 result.tar.gz
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc       657 Jun  3 00:00 Hu2KDmohMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9hVKDmZIYfvm.diag
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc      8659 Jun  3 00:00 runtime_log.err
[2025-06-03 00:00:56] -rw-r--r--. 1 boinc boinc     20522 Jun  3 00:00 stderr.txt
[2025-06-03 00:00:56] HITS file was successfully produced:
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc 180634300 Jun  2 23:59 shared/HITS.pool.root.1
[2025-06-03 00:00:56]  *** Contents of shared directory: ***
[2025-06-03 00:00:56] total 389948
[2025-06-03 00:00:56] -rw-r--r--. 2 boinc boinc 216549361 Jun  2 20:08 ATLAS.root_0
[2025-06-03 00:00:56] -rw-r--r--. 2 boinc boinc    508881 Jun  2 20:08 input.tar.gz
[2025-06-03 00:00:56] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:08 start_atlas.sh
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc 180634300 Jun  2 23:59 HITS.pool.root.1
[2025-06-03 00:00:56] -rw-------. 1 boinc boinc   1587200 Jun  3 00:00 result.tar.gz
00:00:57 (7407): run_atlas exited; CPU time 50132.052421
00:00:57 (7407): called boinc_finish(0)

</stderr_txt>
]]>

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