Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:43:39 (16779): wrapper (7.7.26015): starting
00:43:39 (16779): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:43:39] Arguments: --nthreads 8
[2025-06-03 00:43:39] Threads: 8
[2025-06-03 00:43:39] Checking for CVMFS
[2025-06-03 00:43:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:43:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:43:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:43:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:43:42] 2.11.2.0 15047 30953 92404 146722 0 18 24015499 25165825 4632 130560 0 16789547 99.820 18139754 2034 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:43:42] CVMFS is ok
[2025-06-03 00:43:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:43:42] Checking for apptainer binary...
[2025-06-03 00:43:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:43:42] Running /usr/bin/apptainer --version
[2025-06-03 00:43:42] apptainer version 1.3.2-1.el7
[2025-06-03 00:43:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:05:53] cg-vwn358.simple-grid.lan
[2025-06-03 01:05:53] apptainer works
[2025-06-03 01:05:53] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:05:53] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:05:53] Starting ATLAS job with PandaID=6677385947
[2025-06-03 01:05:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:11:43]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:11:43] 2025-06-03 02:49:38,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:11:43] 2025-06-03 02:49:38,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:11:43] 2025-06-03 02:49:38,732 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:11:43] 2025-06-03 02:49:38,733 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,734 | INFO     | sum of deviations: 40723502827.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,734 | INFO     | mean x: 1748912574.5
[2025-06-03 06:11:43] 2025-06-03 02:49:38,734 | INFO     | mean y: 2448961.7403846155
[2025-06-03 06:11:43] 2025-06-03 02:49:38,735 | INFO     | -- intersect: -25521909577.987015
[2025-06-03 06:11:43] 2025-06-03 02:49:38,735 | INFO     | intersect: -25521909577.987015
[2025-06-03 06:11:43] 2025-06-03 02:49:38,735 | INFO     | chi2: 6.579260590470868
[2025-06-03 06:11:43] 2025-06-03 02:49:38,735 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,737 | INFO     | sum of deviations: 53549878703.99999
[2025-06-03 06:11:43] 2025-06-03 02:49:38,737 | INFO     | mean x: 1748912422.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,737 | INFO     | mean y: 2458711.9310344825
[2025-06-03 06:11:43] 2025-06-03 02:49:38,737 | INFO     | -- intersect: -36102807801.31164
[2025-06-03 06:11:43] 2025-06-03 02:49:38,737 | INFO     | intersect: -36102807801.31164
[2025-06-03 06:11:43] 2025-06-03 02:49:38,738 | INFO     | chi2: 5.87283245901894
[2025-06-03 06:11:43] 2025-06-03 02:49:38,738 | INFO     | current chi2=5.87283245901894 (change=10.737196402815991 %)
[2025-06-03 06:11:43] 2025-06-03 02:49:38,738 | INFO     | right removable region: 202
[2025-06-03 06:11:43] 2025-06-03 02:49:38,738 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,740 | INFO     | sum of deviations: -30461379557.999992
[2025-06-03 06:11:43] 2025-06-03 02:49:38,740 | INFO     | mean x: 1748912727.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,740 | INFO     | mean y: 2504175.3743842365
[2025-06-03 06:11:43] 2025-06-03 02:49:38,740 | INFO     | -- intersect: 20540672434.97748
[2025-06-03 06:11:43] 2025-06-03 02:49:38,740 | INFO     | intersect: 20540672434.97748
[2025-06-03 06:11:43] 2025-06-03 02:49:38,741 | INFO     | chi2: 1.8595376160660895
[2025-06-03 06:11:43] 2025-06-03 02:49:38,741 | INFO     | current chi2=1.8595376160660895 (change=71.7363738600145 %)
[2025-06-03 06:11:43] 2025-06-03 02:49:38,741 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 06:11:43] 2025-06-03 02:49:38,743 | INFO     | sum of deviations: -55984683151.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,743 | INFO     | mean x: 1748912879.5
[2025-06-03 06:11:43] 2025-06-03 02:49:38,743 | INFO     | mean y: 2524807.515151515
[2025-06-03 06:11:43] 2025-06-03 02:49:38,743 | INFO     | -- intersect: 40681919672.687294
[2025-06-03 06:11:43] 2025-06-03 02:49:38,743 | INFO     | intersect: 40681919672.687294
[2025-06-03 06:11:43] 2025-06-03 02:49:38,744 | INFO     | chi2: 0.9876052734746764
[2025-06-03 06:11:43] 2025-06-03 02:49:38,744 | INFO     | current chi2=0.9876052734746764 (change=46.8897394200615 %)
[2025-06-03 06:11:43] 2025-06-03 02:49:38,744 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,745 | INFO     | sum of deviations: -52553941220.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,746 | INFO     | mean x: 1748913032.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,746 | INFO     | mean y: 2521831.3834196893
[2025-06-03 06:11:43] 2025-06-03 02:49:38,746 | INFO     | -- intersect: 41234560952.64345
[2025-06-03 06:11:43] 2025-06-03 02:49:38,746 | INFO     | intersect: 41234560952.64345
[2025-06-03 06:11:43] 2025-06-03 02:49:38,746 | INFO     | chi2: 0.9785839369812823
[2025-06-03 06:11:43] 2025-06-03 02:49:38,746 | INFO     | current chi2=0.9785839369812823 (change=0.9134556827197231 %)
[2025-06-03 06:11:43] 2025-06-03 02:49:38,746 | INFO     | left removable region: 30
[2025-06-03 06:11:43] 2025-06-03 02:49:38,747 | INFO     | sum of square deviations: 1577789583.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,748 | INFO     | sum of deviations: -19988105887.0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,748 | INFO     | mean x: 1748913306.5
[2025-06-03 06:11:43] 2025-06-03 02:49:38,748 | INFO     | mean y: 2515823.476744186
[2025-06-03 06:11:43] 2025-06-03 02:49:38,748 | INFO     | -- intersect: 22158489429.94293
[2025-06-03 06:11:43] 2025-06-03 02:49:38,748 | INFO     | intersect: 22158489429.94293
[2025-06-03 06:11:43] 2025-06-03 02:49:38,749 | INFO     | chi2: 0.14146918138487236
[2025-06-03 06:11:43] 2025-06-03 02:49:38,749 | INFO     | -- intersect: 22158489429.94293
[2025-06-03 06:11:43] 2025-06-03 02:49:38,749 | INFO     | current memory leak: -12.67 B/s (using 172 data points, chi2=0.14)
[2025-06-03 06:11:43] 2025-06-03 02:49:38,750 | INFO     | ..............................
[2025-06-03 06:11:43] 2025-06-03 02:49:38,750 | INFO     | . Timing measurements:
[2025-06-03 06:11:43] 2025-06-03 02:49:38,750 | INFO     | . get job = 0 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,750 | INFO     | . initial setup = 7 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,750 | INFO     | . payload setup = 158 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,750 | INFO     | . stage-in = 0 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,751 | INFO     | . payload execution = 12805 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,751 | INFO     | . stage-out = 1 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,751 | INFO     | . log creation = 0 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,751 | INFO     | ..............................
[2025-06-03 06:11:43] 2025-06-03 02:49:38,893 | INFO     | 
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | job summary report
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | --------------------------------------------------
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | PanDA job id: 6677385947
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | task id: 45006595
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | errors: (none)
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | pilot state: finished 
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | transexitcode: 0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,894 | INFO     | exeerrorcode: 0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | exeerrordiag: 
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | exitcode: 0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | exitmsg: OK
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | cpuconsumptiontime: 46894 s
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | nevents: 400
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | neventsw: 0
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | pid: 11550
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | pgrp: 11550
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | corecount: 8
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | event service: False
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | sizes: {0: 2405175, 1: 2405175, 12: 2405203, 22: 2405231, 33: 2405259, 44: 2405315, 54: 2405471, 65: 2405499, 76: 2405527, 87: 2405583, 91: 2405817, 97: 2406125, 1
[2025-06-03 06:11:43] 2025-06-03 02:49:38,895 | INFO     | --------------------------------------------------
[2025-06-03 06:11:43] 2025-06-03 02:49:38,896 | INFO     | 
[2025-06-03 06:11:43] 2025-06-03 02:49:38,896 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 06:11:43] 2025-06-03 02:49:39,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:11:43] 2025-06-03 02:49:39,489 | INFO     | job 6677385947 has completed (purged errors)
[2025-06-03 06:11:43] 2025-06-03 02:49:39,490 | INFO     | overall cleanup function is called
[2025-06-03 06:11:43] 2025-06-03 02:49:40,498 | INFO     | --- collectZombieJob: --- 10, [11550]
[2025-06-03 06:11:43] 2025-06-03 02:49:40,499 | INFO     | zombie collector waiting for pid 11550
[2025-06-03 06:11:43] 2025-06-03 02:49:40,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:11:43] 2025-06-03 02:49:40,499 | INFO     | collected zombie processes
[2025-06-03 06:11:43] 2025-06-03 02:49:40,499 | INFO     | will attempt to kill all subprocesses of pid=11550
[2025-06-03 06:11:43] 2025-06-03 02:49:40,621 | INFO     | process IDs to be killed: [11550] (in reverse order)
[2025-06-03 06:11:43] 2025-06-03 02:49:41,079 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:11:43] 2025-06-03 02:49:41,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:11:43] 2025-06-03 02:49:41,083 | INFO     | did not find any defunct processes belonging to 11550
[2025-06-03 06:11:43] 2025-06-03 02:49:41,086 | INFO     | did not find any defunct processes belonging to 11550
[2025-06-03 06:11:43] 2025-06-03 02:49:41,090 | INFO     | ready for new job
[2025-06-03 06:11:43] 2025-06-03 02:49:41,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:11:43] 2025-06-03 02:49:41,092 | INFO     | **************************************
[2025-06-03 06:11:43] 2025-06-03 02:49:41,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:11:43] 2025-06-03 02:49:41,092 | INFO     | **************************************
[2025-06-03 06:11:43] 2025-06-03 02:49:41,092 | INFO     | 
[2025-06-03 06:11:43] 2025-06-03 02:49:41,093 | INFO     | pilot is running in a VM
[2025-06-03 06:11:43] 2025-06-03 02:49:41,093 | INFO     | architecture information:
[2025-06-03 06:11:43] 2025-06-03 02:49:41,109 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:11:43] 2025-06-03 02:49:41,195 | INFO     | cat /etc/os-release:
[2025-06-03 06:11:43] NAME="CentOS Linux"
[2025-06-03 06:11:43] VERSION="7 (Core)"
[2025-06-03 06:11:43] ID="centos"
[2025-06-03 06:11:43] ID_LIKE="rhel fedora"
[2025-06-03 06:11:43] VERSION_ID="7"
[2025-06-03 06:11:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:11:43] ANSI_COLOR="0;31"
[2025-06-03 06:11:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:11:43] HOME_URL="https://www.centos.org/"
[2025-06-03 06:11:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:11:43] 
[2025-06-03 06:11:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:11:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:11:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:11:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:11:43] 
[2025-06-03 06:11:43] 2025-06-03 02:49:41,195 | INFO     | **************************************
[2025-06-03 06:11:43] 2025-06-03 02:49:41,699 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 06:11:43] 2025-06-03 02:49:41,862 | INFO     | sufficient remaining disk space (496833134592 B)
[2025-06-03 06:11:43] 2025-06-03 02:49:41,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:11:43] 2025-06-03 02:49:41,862 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:11:43] 2025-06-03 02:49:41,862 | INFO     | update_server=False
[2025-06-03 06:11:43] 2025-06-03 02:49:41,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:11:43] 2025-06-03 02:49:41,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:11:43] 2025-06-03 02:49:42,046 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 06:11:43] 2025-06-03 02:49:42,047 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 06:11:43] 2025-06-03 02:49:42,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:11:43] 2025-06-03 02:49:42,047 | INFO     | will abort loop
[2025-06-03 06:11:43] 2025-06-03 02:49:42,081 | INFO     | PID=2938 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 06:11:43] 2025-06-03 02:49:42,081 | INFO     | .. there are 9 such processes running
[2025-06-03 06:11:43] 2025-06-03 02:49:42,082 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:11:43] 2025-06-03 02:49:42,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:11:43] 2025-06-03 02:49:42,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:11:43] 2025-06-03 02:49:42,631 | INFO     | all payload control threads have been joined
[2025-06-03 06:11:43] 2025-06-03 02:49:42,869 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:42,991 | INFO     | all data control threads have been joined
[2025-06-03 06:11:43] 2025-06-03 02:49:43,054 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,088 | INFO     | all job control threads have been joined
[2025-06-03 06:11:43] 2025-06-03 02:49:43,536 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,638 | INFO     | [payload] control thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,722 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,808 | INFO     | [job] validate thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,854 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,871 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,890 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:43,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:11:43] 2025-06-03 02:49:43,998 | INFO     | [data] control thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:44,094 | INFO     | [job] control thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:44,202 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:44,278 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:44,343 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:44,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:11:43] 2025-06-03 02:49:44,914 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:48,777 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:11:43] 2025-06-03 02:49:49,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140061944121152)>', '<ExcThread(monitor, started 140061717223168)>']
[2025-06-03 06:11:43] 2025-06-03 02:49:50,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:11:43] 2025-06-03 02:49:50,131 | INFO     | [monitor] control thread has ended
[2025-06-03 06:11:43] 2025-06-03 02:49:54,279 | INFO     | all workflow threads have been joined
[2025-06-03 06:11:43] 2025-06-03 02:49:54,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:11:43] 2025-06-03 02:49:54,280 | INFO     | traces error code: 0
[2025-06-03 06:11:43] 2025-06-03 02:49:54,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:11:43] 2025-06-03 02:49:54,539 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:11:43] 2025-06-03 02:49:54,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:11:43] 2025-06-03 02:49:54,595 [wrapper] pilotpid: 2938
[2025-06-03 06:11:43] 2025-06-03 02:49:54,639 [wrapper] Pilot exit status: 0
[2025-06-03 06:11:43] 2025-06-03 02:49:54,941 [wrapper] pandaids: 6677385947
[2025-06-03 06:11:43] 2025-06-03 02:49:55,323 [wrapper] cleanup supervisor_pilot 26794 2939
[2025-06-03 06:11:43] 2025-06-03 02:49:55,403 [wrapper] Test setup, not cleaning
[2025-06-03 06:11:43] 2025-06-03 02:49:55,483 [wrapper] apfmon messages muted
[2025-06-03 06:11:43] 2025-06-03 02:49:55,560 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:11:43] 2025-06-03 02:49:55,616 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:11:43]  *** Error codes and diagnostics ***
[2025-06-03 06:11:43]     "exeErrorCode": 0,
[2025-06-03 06:11:43]     "exeErrorDiag": "",
[2025-06-03 06:11:43]     "pilotErrorCode": 0,
[2025-06-03 06:11:43]     "pilotErrorDiag": "",
[2025-06-03 06:11:43]  *** Listing of results directory ***
[2025-06-03 06:11:43] total 390816
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:03 queuedata.json
[2025-06-03 06:11:43] -rwx------. 1 boinc boinc     37140 Jun  2 19:03 runpilot2-wrapper.sh
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:11:43] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:43 run_atlas
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:43 job.xml
[2025-06-03 06:11:43] -rw-r--r--. 2 boinc boinc 218066804 Jun  3 00:43 EVNT.45006593._000191.pool.root.1
[2025-06-03 06:11:43] -rw-r--r--. 2 boinc boinc    508874 Jun  3 00:43 input.tar.gz
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc      6392 Jun  3 00:43 init_data.xml
[2025-06-03 06:11:43] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:43 start_atlas.sh
[2025-06-03 06:11:43] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:43 shared
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:43 boinc_lockfile
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc      2520 Jun  3 01:05 pandaJob.out
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc    988091 Jun  3 01:09 agis_schedconf.cvmfs.json
[2025-06-03 06:11:43] drwx------. 4 boinc boinc      4096 Jun  3 01:09 pilot3
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc 175320057 Jun  3 04:47 HITS.45006595._004754.pool.root.1
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc       531 Jun  3 04:48 boinc_task_state.xml
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc      1017 Jun  3 04:48 memory_monitor_summary.json
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc   1603667 Jun  3 04:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc    363497 Jun  3 04:48 log.45006595._004754.job.log.tgz.1
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc        95 Jun  3 04:49 pilot_heartbeat.json
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc      7701 Jun  3 04:49 heartbeat.json
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc      4993 Jun  3 04:49 pilotlog.txt
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc   1128964 Jun  3 04:49 log.45006595._004754.job.log.1
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc       357 Jun  3 04:49 output.list
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc       620 Jun  3 04:49 runtime_log
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc   1515520 Jun  3 04:49 result.tar.gz
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc      8659 Jun  3 04:49 runtime_log.err
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc       656 Jun  3 04:49 eghMDmtkNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdsVKDmgsC5Sn.diag
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:11 boinc_mmap_file
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:11 wrapper_checkpoint.txt
[2025-06-03 06:11:43] -rw-r--r--. 1 boinc boinc     20598 Jun  3 06:11 stderr.txt
[2025-06-03 06:11:43] HITS file was successfully produced:
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc 175320057 Jun  3 04:47 shared/HITS.pool.root.1
[2025-06-03 06:11:43]  *** Contents of shared directory: ***
[2025-06-03 06:11:43] total 386164
[2025-06-03 06:11:43] -rw-r--r--. 2 boinc boinc 218066804 Jun  3 00:43 ATLAS.root_0
[2025-06-03 06:11:43] -rw-r--r--. 2 boinc boinc    508874 Jun  3 00:43 input.tar.gz
[2025-06-03 06:11:43] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:43 start_atlas.sh
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc 175320057 Jun  3 04:47 HITS.pool.root.1
[2025-06-03 06:11:43] -rw-------. 1 boinc boinc   1515520 Jun  3 04:49 result.tar.gz
06:11:45 (16779): run_atlas exited; CPU time 47071.064173
06:11:45 (16779): called boinc_finish(0)

</stderr_txt>
]]>

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