Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:04:07 (24751): wrapper (7.7.26015): starting
20:04:07 (24751): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:04:07] Arguments: --nthreads 8
[2025-06-02 20:04:07] Threads: 8
[2025-06-02 20:04:07] Checking for CVMFS
[2025-06-02 20:04:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:04:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:04:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:04:10] 2.11.2.0 31726 30663 89288 146714 0 16 22565422 25165824 4632 130560 0 15450172 99.774 18496009 1905 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:04:10] CVMFS is ok
[2025-06-02 20:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:04:10] Checking for apptainer binary...
[2025-06-02 20:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:04:10] Running /usr/bin/apptainer --version
[2025-06-02 20:04:10] apptainer version 1.3.2-1.el7
[2025-06-02 20:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:04:16] cg-vwn427.simple-grid.lan
[2025-06-02 20:04:16] apptainer works
[2025-06-02 20:04:16] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:04:16] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:04:16] Starting ATLAS job with PandaID=6677386244
[2025-06-02 20:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:49:29]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:49:29] 2025-06-02 21:49:15,557 | INFO     | extracted standard info from prmon json
[2025-06-02 23:49:29] 2025-06-02 21:49:15,557 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:49:29] 2025-06-02 21:49:15,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:49:29] 2025-06-02 21:49:15,558 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:49:29] 2025-06-02 21:49:15,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:49:29] 2025-06-02 21:49:15,563 | INFO     | fitting pss+swap vs Time
[2025-06-02 23:49:29] 2025-06-02 21:49:15,564 | INFO     | sum of square deviations: 2996454322.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,566 | INFO     | sum of deviations: 28341161809.999992
[2025-06-02 23:49:29] 2025-06-02 21:49:15,566 | INFO     | mean x: 1748894363.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,566 | INFO     | mean y: 2444028.8779342724
[2025-06-02 23:49:29] 2025-06-02 21:49:15,566 | INFO     | -- intersect: -16539005565.887444
[2025-06-02 23:49:29] 2025-06-02 21:49:15,566 | INFO     | intersect: -16539005565.887444
[2025-06-02 23:49:29] 2025-06-02 21:49:15,578 | INFO     | chi2: 2.2649656914404366
[2025-06-02 23:49:29] 2025-06-02 21:49:15,579 | INFO     | sum of square deviations: 2790348132.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,580 | INFO     | sum of deviations: 41389622979.50001
[2025-06-02 23:49:29] 2025-06-02 21:49:15,581 | INFO     | mean x: 1748894210.5
[2025-06-02 23:49:29] 2025-06-02 21:49:15,581 | INFO     | mean y: 2453485.966346154
[2025-06-02 23:49:29] 2025-06-02 21:49:15,581 | INFO     | -- intersect: -25939138236.40492
[2025-06-02 23:49:29] 2025-06-02 21:49:15,581 | INFO     | intersect: -25939138236.40492
[2025-06-02 23:49:29] 2025-06-02 21:49:15,581 | INFO     | chi2: 1.4868043230720065
[2025-06-02 23:49:29] 2025-06-02 21:49:15,582 | INFO     | current chi2=1.4868043230720065 (change=34.35643070926816 %)
[2025-06-02 23:49:29] 2025-06-02 21:49:15,582 | INFO     | sum of square deviations: 2593916542.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,584 | INFO     | sum of deviations: 40123024927.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,584 | INFO     | mean x: 1748894058.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,584 | INFO     | mean y: 2452502.4532019706
[2025-06-02 23:49:29] 2025-06-02 21:49:15,584 | INFO     | -- intersect: -27049659139.39321
[2025-06-02 23:49:29] 2025-06-02 21:49:15,584 | INFO     | intersect: -27049659139.39321
[2025-06-02 23:49:29] 2025-06-02 21:49:15,584 | INFO     | chi2: 1.4872744128697069
[2025-06-02 23:49:29] 2025-06-02 21:49:15,584 | INFO     | current chi2=1.4872744128697069 (change=-0.031617462392701856 %)
[2025-06-02 23:49:29] 2025-06-02 21:49:15,585 | INFO     | right removable region: 202
[2025-06-02 23:49:29] 2025-06-02 21:49:15,585 | INFO     | sum of square deviations: 2790348132.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,587 | INFO     | sum of deviations: -4033001427.499998
[2025-06-02 23:49:29] 2025-06-02 21:49:15,587 | INFO     | mean x: 1748894515.5
[2025-06-02 23:49:29] 2025-06-02 21:49:15,587 | INFO     | mean y: 2467732.389423077
[2025-06-02 23:49:29] 2025-06-02 21:49:15,587 | INFO     | -- intersect: 2530214717.315968
[2025-06-02 23:49:29] 2025-06-02 21:49:15,587 | INFO     | intersect: 2530214717.315968
[2025-06-02 23:49:29] 2025-06-02 21:49:15,588 | INFO     | chi2: 0.819329243900973
[2025-06-02 23:49:29] 2025-06-02 21:49:15,588 | INFO     | current chi2=0.819329243900973 (change=63.82597551047632 %)
[2025-06-02 23:49:29] 2025-06-02 21:49:15,589 | INFO     | sum of square deviations: 2593916542.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,590 | INFO     | sum of deviations: -7268692411.999998
[2025-06-02 23:49:29] 2025-06-02 21:49:15,590 | INFO     | mean x: 1748894668.0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,590 | INFO     | mean y: 2470215.4926108373
[2025-06-02 23:49:29] 2025-06-02 21:49:15,590 | INFO     | -- intersect: 4903235986.806643
[2025-06-02 23:49:29] 2025-06-02 21:49:15,591 | INFO     | intersect: 4903235986.806643
[2025-06-02 23:49:29] 2025-06-02 21:49:15,591 | INFO     | chi2: 0.7983391652656411
[2025-06-02 23:49:29] 2025-06-02 21:49:15,591 | INFO     | current chi2=0.7983391652656411 (change=2.561861277573146 %)
[2025-06-02 23:49:29] 2025-06-02 21:49:15,591 | INFO     | left removable region: 20
[2025-06-02 23:49:29] 2025-06-02 21:49:15,591 | INFO     | sum of square deviations: 1869302025.5
[2025-06-02 23:49:29] 2025-06-02 21:49:15,593 | INFO     | sum of deviations: 3474995936.4999995
[2025-06-02 23:49:29] 2025-06-02 21:49:15,593 | INFO     | mean x: 1748894637.5
[2025-06-02 23:49:29] 2025-06-02 21:49:15,593 | INFO     | mean y: 2482327.269230769
[2025-06-02 23:49:29] 2025-06-02 21:49:15,593 | INFO     | -- intersect: -3248678627.87581
[2025-06-02 23:49:29] 2025-06-02 21:49:15,593 | INFO     | intersect: -3248678627.87581
[2025-06-02 23:49:29] 2025-06-02 21:49:15,594 | INFO     | chi2: 0.00015557969341391462
[2025-06-02 23:49:29] 2025-06-02 21:49:15,594 | INFO     | -- intersect: -3248678627.87581
[2025-06-02 23:49:29] 2025-06-02 21:49:15,594 | INFO     | current memory leak: 1.86 B/s (using 182 data points, chi2=0.00)
[2025-06-02 23:49:29] 2025-06-02 21:49:15,603 | INFO     | ..............................
[2025-06-02 23:49:29] 2025-06-02 21:49:15,603 | INFO     | . Timing measurements:
[2025-06-02 23:49:29] 2025-06-02 21:49:15,603 | INFO     | . get job = 0 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,603 | INFO     | . initial setup = 3 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,603 | INFO     | . payload setup = 26 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,603 | INFO     | . stage-in = 0 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,604 | INFO     | . payload execution = 12989 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,604 | INFO     | . stage-out = 3 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,604 | INFO     | . log creation = 1 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,604 | INFO     | ..............................
[2025-06-02 23:49:29] 2025-06-02 21:49:15,801 | INFO     | 
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | job summary report
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | --------------------------------------------------
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | PanDA job id: 6677386244
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | task id: 45006595
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | errors: (none)
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | pilot state: finished 
[2025-06-02 23:49:29] 2025-06-02 21:49:15,802 | INFO     | transexitcode: 0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | exeerrorcode: 0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | exeerrordiag: 
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | exitcode: 0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | exitmsg: OK
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | cpuconsumptiontime: 48581 s
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | nevents: 400
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | neventsw: 0
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | pid: 5015
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | pgrp: 5015
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | corecount: 8
[2025-06-02 23:49:29] 2025-06-02 21:49:15,803 | INFO     | event service: False
[2025-06-02 23:49:29] 2025-06-02 21:49:15,804 | INFO     | sizes: {0: 2404945, 1: 2405029, 2: 2405228, 13: 2405228, 23: 2405284, 34: 2405312, 45: 2405468, 56: 2405496, 66: 2405524, 77: 2405552, 88: 2405608, 89: 2406122, 98
[2025-06-02 23:49:29] 2025-06-02 21:49:15,804 | INFO     | --------------------------------------------------
[2025-06-02 23:49:29] 2025-06-02 21:49:15,804 | INFO     | 
[2025-06-02 23:49:29] 2025-06-02 21:49:15,804 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-02 23:49:29] 2025-06-02 21:49:16,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:49:29] 2025-06-02 21:49:16,038 | INFO     | job 6677386244 has completed (purged errors)
[2025-06-02 23:49:29] 2025-06-02 21:49:16,039 | INFO     | overall cleanup function is called
[2025-06-02 23:49:29] 2025-06-02 21:49:17,047 | INFO     | --- collectZombieJob: --- 10, [5015]
[2025-06-02 23:49:29] 2025-06-02 21:49:17,048 | INFO     | zombie collector waiting for pid 5015
[2025-06-02 23:49:29] 2025-06-02 21:49:17,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:49:29] 2025-06-02 21:49:17,048 | INFO     | collected zombie processes
[2025-06-02 23:49:29] 2025-06-02 21:49:17,048 | INFO     | will attempt to kill all subprocesses of pid=5015
[2025-06-02 23:49:29] 2025-06-02 21:49:17,172 | INFO     | process IDs to be killed: [5015] (in reverse order)
[2025-06-02 23:49:29] 2025-06-02 21:49:17,992 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:49:29] 2025-06-02 21:49:17,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:49:29] 2025-06-02 21:49:17,996 | INFO     | did not find any defunct processes belonging to 5015
[2025-06-02 23:49:29] 2025-06-02 21:49:17,999 | INFO     | did not find any defunct processes belonging to 5015
[2025-06-02 23:49:29] 2025-06-02 21:49:17,999 | INFO     | ready for new job
[2025-06-02 23:49:29] 2025-06-02 21:49:18,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:49:29] 2025-06-02 21:49:18,001 | INFO     | **************************************
[2025-06-02 23:49:29] 2025-06-02 21:49:18,002 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:49:29] 2025-06-02 21:49:18,002 | INFO     | **************************************
[2025-06-02 23:49:29] 2025-06-02 21:49:18,002 | INFO     | 
[2025-06-02 23:49:29] 2025-06-02 21:49:18,002 | INFO     | pilot is running in a VM
[2025-06-02 23:49:29] 2025-06-02 21:49:18,003 | INFO     | architecture information:
[2025-06-02 23:49:29] 2025-06-02 21:49:18,015 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:49:29] 2025-06-02 21:49:18,185 | INFO     | cat /etc/os-release:
[2025-06-02 23:49:29] NAME="CentOS Linux"
[2025-06-02 23:49:29] VERSION="7 (Core)"
[2025-06-02 23:49:29] ID="centos"
[2025-06-02 23:49:29] ID_LIKE="rhel fedora"
[2025-06-02 23:49:29] VERSION_ID="7"
[2025-06-02 23:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:49:29] ANSI_COLOR="0;31"
[2025-06-02 23:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:49:29] HOME_URL="https://www.centos.org/"
[2025-06-02 23:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:49:29] 
[2025-06-02 23:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:49:29] 
[2025-06-02 23:49:29] 2025-06-02 21:49:18,185 | INFO     | **************************************
[2025-06-02 23:49:29] 2025-06-02 21:49:18,689 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-02 23:49:29] 2025-06-02 21:49:18,804 | INFO     | sufficient remaining disk space (496823697408 B)
[2025-06-02 23:49:29] 2025-06-02 21:49:18,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:49:29] 2025-06-02 21:49:18,805 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:49:29] 2025-06-02 21:49:18,805 | INFO     | update_server=False
[2025-06-02 23:49:29] 2025-06-02 21:49:18,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:49:29] 2025-06-02 21:49:18,805 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 23:49:29] 2025-06-02 21:49:18,805 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:49:29] 2025-06-02 21:49:18,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:49:29] 2025-06-02 21:49:18,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:49:29] 2025-06-02 21:49:18,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:49:29] 2025-06-02 21:49:18,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:49:29] 2025-06-02 21:49:18,808 | INFO     | aborting loop
[2025-06-02 23:49:29] 2025-06-02 21:49:19,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:49:29] 2025-06-02 21:49:19,751 | INFO     | all data control threads have been joined
[2025-06-02 23:49:29] 2025-06-02 21:49:19,786 | INFO     | all job control threads have been joined
[2025-06-02 23:49:29] 2025-06-02 21:49:19,789 | INFO     | all payload control threads have been joined
[2025-06-02 23:49:29] 2025-06-02 21:49:19,811 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:19,814 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,343 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,459 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,614 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,660 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:49:29] 2025-06-02 21:49:20,755 | INFO     | [data] control thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,792 | INFO     | [job] control thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,795 | INFO     | [payload] control thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:20,815 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:21,175 | INFO     | [job] validate thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:21,187 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:21,262 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:21,747 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:23,741 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:49:29] 2025-06-02 21:49:23,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280388708160)>', '<ExcThread(monitor, started 140279730398976)>']
[2025-06-02 23:49:29] 2025-06-02 21:49:23,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:49:29] 2025-06-02 21:49:23,833 | INFO     | [monitor] control thread has ended
[2025-06-02 23:49:29] 2025-06-02 21:49:28,785 | INFO     | all workflow threads have been joined
[2025-06-02 23:49:29] 2025-06-02 21:49:28,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:49:29] 2025-06-02 21:49:28,786 | INFO     | traces error code: 0
[2025-06-02 23:49:29] 2025-06-02 21:49:28,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:49:29] 2025-06-02 21:49:29,082 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:49:29] 2025-06-02 21:49:29,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:49:29] 2025-06-02 21:49:29,210 [wrapper] pilotpid: 28721
[2025-06-02 23:49:29] 2025-06-02 21:49:29,242 [wrapper] Pilot exit status: 0
[2025-06-02 23:49:29] 2025-06-02 21:49:29,281 [wrapper] pandaids: 6677386244
[2025-06-02 23:49:29] 2025-06-02 21:49:29,331 [wrapper] cleanup supervisor_pilot 14799 28722
[2025-06-02 23:49:29] 2025-06-02 21:49:29,346 [wrapper] Test setup, not cleaning
[2025-06-02 23:49:29] 2025-06-02 21:49:29,352 [wrapper] apfmon messages muted
[2025-06-02 23:49:29] 2025-06-02 21:49:29,354 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:49:29] 2025-06-02 21:49:29,359 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:49:29]  *** Error codes and diagnostics ***
[2025-06-02 23:49:29]     "exeErrorCode": 0,
[2025-06-02 23:49:29]     "exeErrorDiag": "",
[2025-06-02 23:49:29]     "pilotErrorCode": 0,
[2025-06-02 23:49:29]     "pilotErrorDiag": "",
[2025-06-02 23:49:29]  *** Listing of results directory ***
[2025-06-02 23:49:29] total 394356
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:59 queuedata.json
[2025-06-02 23:49:29] -rwx------. 1 boinc boinc     37140 Jun  2 19:01 runpilot2-wrapper.sh
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:49:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:04 run_atlas
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:04 job.xml
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc      6392 Jun  2 20:04 init_data.xml
[2025-06-02 23:49:29] -rw-r--r--. 2 boinc boinc 218103861 Jun  2 20:04 EVNT.45006593._000193.pool.root.1
[2025-06-02 23:49:29] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:04 start_atlas.sh
[2025-06-02 23:49:29] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:04 shared
[2025-06-02 23:49:29] -rw-r--r--. 2 boinc boinc    508879 Jun  2 20:04 input.tar.gz
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:04 boinc_lockfile
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc      2518 Jun  2 20:04 pandaJob.out
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc    988298 Jun  2 20:07 agis_schedconf.cvmfs.json
[2025-06-02 23:49:29] drwx------. 4 boinc boinc      4096 Jun  2 20:07 pilot3
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc 178850115 Jun  2 23:46 HITS.45006595._004803.pool.root.1
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc       531 Jun  2 23:46 boinc_task_state.xml
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc      1017 Jun  2 23:47 memory_monitor_summary.json
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc   1603667 Jun  2 23:47 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc    364914 Jun  2 23:47 log.45006595._004803.job.log.tgz.1
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc        95 Jun  2 23:49 pilot_heartbeat.json
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc      7683 Jun  2 23:49 heartbeat.json
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc        28 Jun  2 23:49 wrapper_checkpoint.txt
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:49 boinc_mmap_file
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc      4540 Jun  2 23:49 pilotlog.txt
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc   1155810 Jun  2 23:49 log.45006595._004803.job.log.1
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc       357 Jun  2 23:49 output.list
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:49 runtime_log
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc   1536000 Jun  2 23:49 result.tar.gz
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc       657 Jun  2 23:49 SLjMDmiiNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4bfKDmXL2rvm.diag
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc      8673 Jun  2 23:49 runtime_log.err
[2025-06-02 23:49:29] -rw-r--r--. 1 boinc boinc     20513 Jun  2 23:49 stderr.txt
[2025-06-02 23:49:29] HITS file was successfully produced:
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc 178850115 Jun  2 23:46 shared/HITS.pool.root.1
[2025-06-02 23:49:29]  *** Contents of shared directory: ***
[2025-06-02 23:49:29] total 389672
[2025-06-02 23:49:29] -rw-r--r--. 2 boinc boinc 218103861 Jun  2 20:04 ATLAS.root_0
[2025-06-02 23:49:29] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:04 start_atlas.sh
[2025-06-02 23:49:29] -rw-r--r--. 2 boinc boinc    508879 Jun  2 20:04 input.tar.gz
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc 178850115 Jun  2 23:46 HITS.pool.root.1
[2025-06-02 23:49:29] -rw-------. 1 boinc boinc   1536000 Jun  2 23:49 result.tar.gz
23:49:31 (24751): run_atlas exited; CPU time 48751.247917
23:49:31 (24751): called boinc_finish(0)

</stderr_txt>
]]>

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