Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:53:41 (3161339): wrapper (7.7.26015): starting
10:53:41 (3161339): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 10:53:41] Arguments: --nthreads 12
[2025-06-02 10:53:41] Threads: 12
[2025-06-02 10:53:41] Checking for CVMFS
[2025-06-02 10:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 10:53:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 10:53:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 10:53:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 10:53:42] 2.11.5.0 3522937 21324 174140 146714 3 631 34305960 45568000 15173 130560 0 214897967 99.793 148091329 28673 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 10:53:42] CVMFS is ok
[2025-06-02 10:53:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 10:53:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 10:53:42] Further information can be found at the LHC@home message board.
[2025-06-02 10:53:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 10:53:42] Checking for apptainer binary...
[2025-06-02 10:53:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 10:53:42] Running /usr/bin/apptainer --version
[2025-06-02 10:53:42] apptainer version 1.4.0-1.el9
[2025-06-02 10:53:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 10:53:42] wns0033.triumf.lcg
[2025-06-02 10:53:42] apptainer works
[2025-06-02 10:53:42] Set ATHENA_PROC_NUMBER=12
[2025-06-02 10:53:42] Set ATHENA_CORE_NUMBER=12
[2025-06-02 10:53:42] Starting ATLAS job with PandaID=6677385846
[2025-06-02 10:53:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 10:56:42]  *** The last 200 lines of the pilot log: ***
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | INFO     | extracted standard info from prmon json
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | found no stored workdir sizes
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | wrong length of table data, x=[1748886853.0], y=[1083.0] (must be same and length>=4)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | ..............................
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . Timing measurements:
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . get job = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . initial setup = 2 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . payload setup = 4 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . stage-in = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . payload execution = 14 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . stage-out = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . log creation = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | ..............................
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677385846/pilotlog.txt
[2025-06-02 10:56:42] 2025-06-02 17:56:28,800 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 10:56:42] - Log from pilotlog.txt -
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | INFO     | extracted standard info from prmon json
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | found no stored workdir sizes
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | wrong length of table data, x=[1748886853.0], y=[1083.0] (must be same and length>=4)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | ..............................
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . Timing measurements:
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . get job = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . initial setup = 2 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . payload setup = 4 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . stage-in = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . payload execution = 14 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . stage-out = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . log creation = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | ..............................
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677385846/pilotlog.txt
[2025-06-02 10:56:42] 2025-06-02 17:56:28,800 | WARNING  | 
[2025-06-02 10:56:42] [begin log extracts]
[2025-06-02 10:56:42] - Log from pilotlog.txt -
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | INFO     | extracted standard info from prmon json
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:56:42] 2025-06-02 17:56:28,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | found no stored workdir sizes
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:56:42] 2025-06-02 17:56:28,786 | WARNING  | wrong length of table data, x=[1748886853.0], y=[1083.0] (must be same and length>=4)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | ..............................
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . Timing measurements:
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . get job = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . initial setup = 2 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . payload setup = 4 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . stage-in = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . payload execution = 14 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . stage-out = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | . log creation = 0 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | ..............................
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:56:42] 2025-06-02 17:56:28,787 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677385846/pilotlog.txt
[2025-06-02 10:56:42] [end log extracts]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,800 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,801 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 10:56:42] 2025-06-02 17:56:28,862 | INFO     | 
[2025-06-02 10:56:42] 2025-06-02 17:56:28,862 | INFO     | job summary report
[2025-06-02 10:56:42] 2025-06-02 17:56:28,862 | INFO     | --------------------------------------------------
[2025-06-02 10:56:42] 2025-06-02 17:56:28,862 | INFO     | PanDA job id: 6677385846
[2025-06-02 10:56:42] 2025-06-02 17:56:28,862 | INFO     | task id: 45006595
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 10:54:20,239 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | pilot state: failed 
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | transexitcode: 65
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | exeerrorcode: 65
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | exitcode: 65
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | cpuconsumptiontime: 16 s
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | nevents: 0
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | neventsw: 0
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | pid: 3171207
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | pgrp: 3171207
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | corecount: 12
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | event service: False
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | sizes: {0: 2405168, 3: 2405374, 11: 2405402, 22: 2428541, 23: 2432780, 24: 2432780, 144: 2433050}
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | --------------------------------------------------
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | 
[2025-06-02 10:56:42] 2025-06-02 17:56:28,863 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 10:56:42] 2025-06-02 17:56:28,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | job 6677385846 has completed (purged errors)
[2025-06-02 10:56:42] 2025-06-02 17:56:28,881 | INFO     | overall cleanup function is called
[2025-06-02 10:56:42] 2025-06-02 17:56:29,884 | INFO     | --- collectZombieJob: --- 10, [3171207]
[2025-06-02 10:56:42] 2025-06-02 17:56:29,884 | INFO     | zombie collector waiting for pid 3171207
[2025-06-02 10:56:42] 2025-06-02 17:56:29,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 10:56:42] 2025-06-02 17:56:29,884 | INFO     | collected zombie processes
[2025-06-02 10:56:42] 2025-06-02 17:56:29,885 | INFO     | will attempt to kill all subprocesses of pid=3171207
[2025-06-02 10:56:42] 2025-06-02 17:56:30,030 | INFO     | process IDs to be killed: [3171207] (in reverse order)
[2025-06-02 10:56:42] 2025-06-02 17:56:30,089 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 10:56:42] 2025-06-02 17:56:30,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 10:56:42] 2025-06-02 17:56:30,095 | INFO     | did not find any defunct processes belonging to 3171207
[2025-06-02 10:56:42] 2025-06-02 17:56:30,101 | INFO     | did not find any defunct processes belonging to 3171207
[2025-06-02 10:56:42] 2025-06-02 17:56:30,102 | INFO     | ready for new job
[2025-06-02 10:56:42] 2025-06-02 17:56:30,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 10:56:42] 2025-06-02 17:56:30,103 | INFO     | **************************************
[2025-06-02 10:56:42] 2025-06-02 17:56:30,103 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 10:56:42] 2025-06-02 17:56:30,103 | INFO     | **************************************
[2025-06-02 10:56:42] 2025-06-02 17:56:30,103 | INFO     | 
[2025-06-02 10:56:42] 2025-06-02 17:56:30,105 | INFO     | architecture information:
[2025-06-02 10:56:42] 2025-06-02 17:56:30,106 | INFO     | executing command: cat /etc/os-release
[2025-06-02 10:56:42] 2025-06-02 17:56:30,116 | INFO     | cat /etc/os-release:
[2025-06-02 10:56:42] NAME="CentOS Linux"
[2025-06-02 10:56:42] VERSION="7 (Core)"
[2025-06-02 10:56:42] ID="centos"
[2025-06-02 10:56:42] ID_LIKE="rhel fedora"
[2025-06-02 10:56:42] VERSION_ID="7"
[2025-06-02 10:56:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 10:56:42] ANSI_COLOR="0;31"
[2025-06-02 10:56:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 10:56:42] HOME_URL="https://www.centos.org/"
[2025-06-02 10:56:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 10:56:42] 
[2025-06-02 10:56:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 10:56:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 10:56:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 10:56:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 10:56:42] 
[2025-06-02 10:56:42] 2025-06-02 17:56:30,116 | INFO     | **************************************
[2025-06-02 10:56:42] 2025-06-02 17:56:30,621 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 10:56:42] 2025-06-02 17:56:30,633 | INFO     | sufficient remaining disk space (1886941872128 B)
[2025-06-02 10:56:42] 2025-06-02 17:56:30,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 10:56:42] 2025-06-02 17:56:30,634 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 10:56:42] 2025-06-02 17:56:30,634 | INFO     | update_server=False
[2025-06-02 10:56:42] 2025-06-02 17:56:30,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 10:56:42] 2025-06-02 17:56:30,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:56:42] 2025-06-02 17:56:30,662 | INFO     | all data control threads have been joined
[2025-06-02 10:56:42] 2025-06-02 17:56:30,972 | INFO     | all job control threads have been joined
[2025-06-02 10:56:42] 2025-06-02 17:56:30,981 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 10:56:42] 2025-06-02 17:56:30,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 10:56:42] 2025-06-02 17:56:30,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 10:56:42] 2025-06-02 17:56:31,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 10:56:42] 2025-06-02 17:56:31,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:56:42] 2025-06-02 17:56:31,261 | INFO     | aborting loop
[2025-06-02 10:56:42] 2025-06-02 17:56:31,638 | INFO     | [job] retrieve thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:31,640 | INFO     | [job] queue monitor thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:31,667 | INFO     | [data] control thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:31,751 | INFO     | all payload control threads have been joined
[2025-06-02 10:56:42] 2025-06-02 17:56:31,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 10:56:42] 2025-06-02 17:56:31,977 | INFO     | [job] control thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:32,080 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:32,175 | INFO     | [payload] failed_post thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:32,267 | INFO     | [job] job monitor thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:32,756 | INFO     | [payload] control thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:32,762 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:32,763 | INFO     | [job] validate thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:32,905 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:33,053 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:33,119 | INFO     | [data] copytool_in thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:33,149 | INFO     | [data] copytool_out thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:33,171 | INFO     | [payload] validate_post thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:35,926 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 10:56:42] 2025-06-02 17:56:37,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258677016384)>', '<ExcThread(monitor, started 140258356205312)>']
[2025-06-02 10:56:42] 2025-06-02 17:56:38,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 10:56:42] 2025-06-02 17:56:38,014 | INFO     | [monitor] control thread has ended
[2025-06-02 10:56:42] 2025-06-02 17:56:42,352 | INFO     | all workflow threads have been joined
[2025-06-02 10:56:42] 2025-06-02 17:56:42,352 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 10:56:42] 2025-06-02 17:56:42,352 | INFO     | traces error code: 0
[2025-06-02 10:56:42] 2025-06-02 17:56:42,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 10:56:42] 2025-06-02 17:56:42,494 [wrapper] ==== pilot stdout END ====
[2025-06-02 10:56:42] 2025-06-02 17:56:42,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 10:56:42] 2025-06-02 17:56:42,499 [wrapper] pilotpid: 3164896
[2025-06-02 10:56:42] 2025-06-02 17:56:42,501 [wrapper] Pilot exit status: 0
[2025-06-02 10:56:42] 2025-06-02 17:56:42,509 [wrapper] pandaids: 6677385846
[2025-06-02 10:56:42] 2025-06-02 17:56:42,547 [wrapper] cleanup supervisor_pilot 3164902 3164897
[2025-06-02 10:56:42] 2025-06-02 17:56:42,550 [wrapper] Test setup, not cleaning
[2025-06-02 10:56:42] 2025-06-02 17:56:42,552 [wrapper] apfmon messages muted
[2025-06-02 10:56:42] 2025-06-02 17:56:42,555 [wrapper] ==== wrapper stdout END ====
[2025-06-02 10:56:42] 2025-06-02 17:56:42,557 [wrapper] ==== wrapper stderr END ====
[2025-06-02 10:56:42]  *** Error codes and diagnostics ***
[2025-06-02 10:56:42]     "exeErrorCode": 65,
[2025-06-02 10:56:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:56:42]     "pilotErrorCode": 1305,
[2025-06-02 10:56:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:56:42]  *** Listing of results directory ***
[2025-06-02 10:56:42] total 212388
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc    495897 Jun  2 09:40 pilot3.tar.gz
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc      5111 Jun  2 09:57 queuedata.json
[2025-06-02 10:56:42] -rwx------. 1 boinc boinc     37140 Jun  2 09:58 runpilot2-wrapper.sh
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc       100 Jun  2 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 10:56:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 10:53 run_atlas
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc       105 Jun  2 10:53 job.xml
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc      6601 Jun  2 10:53 init_data.xml
[2025-06-02 10:56:42] -rw-r--r--. 2 boinc boinc 213458669 Jun  2 10:53 EVNT.45006593._000187.pool.root.1
[2025-06-02 10:56:42] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:53 start_atlas.sh
[2025-06-02 10:56:42] drwxrwx--x. 2 boinc boinc      4096 Jun  2 10:53 shared
[2025-06-02 10:56:42] -rw-r--r--. 2 boinc boinc    508875 Jun  2 10:53 input.tar.gz
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc         0 Jun  2 10:53 boinc_lockfile
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc      2518 Jun  2 10:53 pandaJob.out
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc    988298 Jun  2 10:53 agis_schedconf.cvmfs.json
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc   1603667 Jun  2 10:53 agis_ddmendpoints.agis.ALL.json
[2025-06-02 10:56:42] drwx------. 4 boinc boinc      4096 Jun  2 10:53 pilot3
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc       960 Jun  2 10:54 memory_monitor_summary.json
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc       521 Jun  2 10:54 boinc_task_state.xml
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc     20571 Jun  2 10:54 log.45006595._004653.job.log.tgz.1
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc        95 Jun  2 10:55 pilot_heartbeat.json
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc      8299 Jun  2 10:56 heartbeat.json
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc      8192 Jun  2 10:56 boinc_mmap_file
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc        22 Jun  2 10:56 wrapper_checkpoint.txt
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc      4352 Jun  2 10:56 pilotlog.txt
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc     72580 Jun  2 10:56 log.45006595._004653.job.log.1
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc       188 Jun  2 10:56 output.list
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc       620 Jun  2 10:56 runtime_log
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc    112640 Jun  2 10:56 result.tar.gz
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc      8484 Jun  2 10:56 runtime_log.err
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc       645 Jun  2 10:56 ovDLDmpfNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxrVKDmjXESAn.diag
[2025-06-02 10:56:42] -rw-r--r--. 1 boinc boinc     21439 Jun  2 10:56 stderr.txt
[2025-06-02 10:56:42] No HITS result produced
[2025-06-02 10:56:42]  *** Contents of shared directory: ***
[2025-06-02 10:56:42] total 209088
[2025-06-02 10:56:42] -rw-r--r--. 2 boinc boinc 213458669 Jun  2 10:53 ATLAS.root_0
[2025-06-02 10:56:42] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:53 start_atlas.sh
[2025-06-02 10:56:42] -rw-r--r--. 2 boinc boinc    508875 Jun  2 10:53 input.tar.gz
[2025-06-02 10:56:42] -rw-------. 1 boinc boinc    112640 Jun  2 10:56 result.tar.gz
10:56:43 (3161339): run_atlas exited; CPU time 19.209718
10:56:43 (3161339): called boinc_finish(0)

</stderr_txt>
]]>

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