Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:48:40 (21942): wrapper (7.7.26015): starting
19:48:40 (21942): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 19:48:40] Arguments: --nthreads 8
[2025-06-02 19:48:40] Threads: 8
[2025-06-02 19:48:40] Checking for CVMFS
[2025-06-02 19:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 19:48:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 19:48:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 19:48:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 19:48:44] 2.11.2.0 27033 30760 98236 146714 1 16 12734733 25165825 4632 130560 0 15363459 99.776 18602893 2324 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 19:48:44] CVMFS is ok
[2025-06-02 19:48:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 19:48:44] Checking for apptainer binary...
[2025-06-02 19:48:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 19:48:44] Running /usr/bin/apptainer --version
[2025-06-02 19:48:44] apptainer version 1.3.2-1.el7
[2025-06-02 19:48:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:03:46] cg-vwn443.simple-grid.lan
[2025-06-02 20:03:46] apptainer works
[2025-06-02 20:03:46] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:03:46] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:03:46] Starting ATLAS job with PandaID=6677378527
[2025-06-02 20:03:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:47:12]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:47:12] 2025-06-02 21:41:50,246 | INFO     | extracted standard info from prmon json
[2025-06-02 23:47:12] 2025-06-02 21:41:50,246 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:47:12] 2025-06-02 21:41:50,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:47:12] 2025-06-02 21:41:50,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:47:12] 2025-06-02 21:41:50,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:47:12] 2025-06-02 21:41:50,251 | INFO     | fitting pss+swap vs Time
[2025-06-02 23:47:12] 2025-06-02 21:41:50,252 | INFO     | sum of square deviations: 2912836010.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,253 | INFO     | sum of deviations: 21992843132.000008
[2025-06-02 23:47:12] 2025-06-02 21:41:50,253 | INFO     | mean x: 1748893940.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,254 | INFO     | mean y: 2453043.895734597
[2025-06-02 23:47:12] 2025-06-02 21:41:50,254 | INFO     | -- intersect: -13202255338.202793
[2025-06-02 23:47:12] 2025-06-02 21:41:50,254 | INFO     | intersect: -13202255338.202793
[2025-06-02 23:47:12] 2025-06-02 21:41:50,254 | INFO     | chi2: 2.580941881636911
[2025-06-02 23:47:12] 2025-06-02 21:41:50,263 | INFO     | sum of square deviations: 2710627567.5
[2025-06-02 23:47:12] 2025-06-02 21:41:50,265 | INFO     | sum of deviations: 35387193547.00001
[2025-06-02 23:47:12] 2025-06-02 21:41:50,265 | INFO     | mean x: 1748893787.5
[2025-06-02 23:47:12] 2025-06-02 21:41:50,265 | INFO     | mean y: 2462937.155339806
[2025-06-02 23:47:12] 2025-06-02 21:41:50,265 | INFO     | -- intersect: -22829313620.215046
[2025-06-02 23:47:12] 2025-06-02 21:41:50,265 | INFO     | intersect: -22829313620.215046
[2025-06-02 23:47:12] 2025-06-02 21:41:50,266 | INFO     | chi2: 1.7611139205246051
[2025-06-02 23:47:12] 2025-06-02 21:41:50,266 | INFO     | current chi2=1.7611139205246051 (change=31.764681217554052 %)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,266 | INFO     | sum of square deviations: 2518000700.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,268 | INFO     | sum of deviations: 34149777986.000008
[2025-06-02 23:47:12] 2025-06-02 21:41:50,268 | INFO     | mean x: 1748893635.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,268 | INFO     | mean y: 2461957.3233830845
[2025-06-02 23:47:12] 2025-06-02 21:41:50,268 | INFO     | -- intersect: -23716486713.492527
[2025-06-02 23:47:12] 2025-06-02 21:41:50,268 | INFO     | intersect: -23716486713.492527
[2025-06-02 23:47:12] 2025-06-02 21:41:50,268 | INFO     | chi2: 1.7624301811760381
[2025-06-02 23:47:12] 2025-06-02 21:41:50,269 | INFO     | current chi2=1.7624301811760381 (change=-0.07474023321789913 %)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,269 | INFO     | right removable region: 200
[2025-06-02 23:47:12] 2025-06-02 21:41:50,269 | INFO     | sum of square deviations: 2710627567.5
[2025-06-02 23:47:12] 2025-06-02 21:41:50,271 | INFO     | sum of deviations: -15550029445.500002
[2025-06-02 23:47:12] 2025-06-02 21:41:50,271 | INFO     | mean x: 1748894092.5
[2025-06-02 23:47:12] 2025-06-02 21:41:50,271 | INFO     | mean y: 2481109.4708737866
[2025-06-02 23:47:12] 2025-06-02 21:41:50,271 | INFO     | -- intersect: 10035343964.36988
[2025-06-02 23:47:12] 2025-06-02 21:41:50,271 | INFO     | intersect: 10035343964.36988
[2025-06-02 23:47:12] 2025-06-02 21:41:50,272 | INFO     | chi2: 0.9011632930222515
[2025-06-02 23:47:12] 2025-06-02 21:41:50,272 | INFO     | current chi2=0.9011632930222515 (change=65.08393701408315 %)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,272 | INFO     | sum of square deviations: 2518000700.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,274 | INFO     | sum of deviations: -11071625294.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,274 | INFO     | mean x: 1748894245.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,274 | INFO     | mean y: 2477529.855721393
[2025-06-02 23:47:12] 2025-06-02 21:41:50,274 | INFO     | -- intersect: 7692349005.853736
[2025-06-02 23:47:12] 2025-06-02 21:41:50,274 | INFO     | intersect: 7692349005.853736
[2025-06-02 23:47:12] 2025-06-02 21:41:50,275 | INFO     | chi2: 0.8775448397019541
[2025-06-02 23:47:12] 2025-06-02 21:41:50,275 | INFO     | current chi2=0.8775448397019541 (change=2.620884972032949 %)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,275 | INFO     | left removable region: 20
[2025-06-02 23:47:12] 2025-06-02 21:41:50,275 | INFO     | sum of square deviations: 1808350185.0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,276 | INFO     | sum of deviations: 4619810660.999999
[2025-06-02 23:47:12] 2025-06-02 21:41:50,277 | INFO     | mean x: 1748894214.5
[2025-06-02 23:47:12] 2025-06-02 21:41:50,277 | INFO     | mean y: 2485725.3
[2025-06-02 23:47:12] 2025-06-02 21:41:50,277 | INFO     | -- intersect: -4465432161.471648
[2025-06-02 23:47:12] 2025-06-02 21:41:50,277 | INFO     | intersect: -4465432161.471648
[2025-06-02 23:47:12] 2025-06-02 21:41:50,277 | INFO     | chi2: 0.0005067245533937505
[2025-06-02 23:47:12] 2025-06-02 21:41:50,277 | INFO     | -- intersect: -4465432161.471648
[2025-06-02 23:47:12] 2025-06-02 21:41:50,278 | INFO     | current memory leak: 2.55 B/s (using 180 data points, chi2=0.00)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | ..............................
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . Timing measurements:
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . get job = 0 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . initial setup = 3 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . payload setup = 16 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . stage-in = 0 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . payload execution = 12900 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . stage-out = 3 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | . log creation = 0 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,310 | INFO     | ..............................
[2025-06-02 23:47:12] 2025-06-02 21:41:50,489 | INFO     | 
[2025-06-02 23:47:12] 2025-06-02 21:41:50,489 | INFO     | job summary report
[2025-06-02 23:47:12] 2025-06-02 21:41:50,489 | INFO     | --------------------------------------------------
[2025-06-02 23:47:12] 2025-06-02 21:41:50,489 | INFO     | PanDA job id: 6677378527
[2025-06-02 23:47:12] 2025-06-02 21:41:50,489 | INFO     | task id: 45006595
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | errors: (none)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | pilot state: finished 
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | transexitcode: 0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | exeerrorcode: 0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | exeerrordiag: 
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | exitcode: 0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,490 | INFO     | exitmsg: OK
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | cpuconsumptiontime: 48910 s
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | nevents: 400
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | neventsw: 0
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | pid: 8636
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | pgrp: 8636
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | corecount: 8
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | event service: False
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | sizes: {0: 2405176, 1: 2405176, 12: 2405204, 15: 2405438, 22: 2405466, 12920: 2434792, 12924: 2443733, 12927: 2443789, 13022: 2443959}
[2025-06-02 23:47:12] 2025-06-02 21:41:50,491 | INFO     | --------------------------------------------------
[2025-06-02 23:47:12] 2025-06-02 21:41:50,492 | INFO     | 
[2025-06-02 23:47:12] 2025-06-02 21:41:50,492 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-02 23:47:12] 2025-06-02 21:41:50,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:47:12] 2025-06-02 21:41:50,887 | INFO     | job 6677378527 has completed (purged errors)
[2025-06-02 23:47:12] 2025-06-02 21:41:50,887 | INFO     | overall cleanup function is called
[2025-06-02 23:47:12] 2025-06-02 21:41:51,143 | INFO     | 13059s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-02 23:47:12] 2025-06-02 21:41:51,897 | INFO     | --- collectZombieJob: --- 10, [8636]
[2025-06-02 23:47:12] 2025-06-02 21:41:51,897 | INFO     | zombie collector waiting for pid 8636
[2025-06-02 23:47:12] 2025-06-02 21:41:51,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:47:12] 2025-06-02 21:41:51,897 | INFO     | collected zombie processes
[2025-06-02 23:47:12] 2025-06-02 21:41:51,898 | INFO     | will attempt to kill all subprocesses of pid=8636
[2025-06-02 23:47:12] 2025-06-02 21:41:52,015 | INFO     | process IDs to be killed: [8636] (in reverse order)
[2025-06-02 23:47:12] 2025-06-02 21:41:52,595 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:47:12] 2025-06-02 21:41:52,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:47:12] 2025-06-02 21:41:52,606 | INFO     | did not find any defunct processes belonging to 8636
[2025-06-02 23:47:12] 2025-06-02 21:41:52,609 | INFO     | did not find any defunct processes belonging to 8636
[2025-06-02 23:47:12] 2025-06-02 21:41:52,610 | INFO     | ready for new job
[2025-06-02 23:47:12] 2025-06-02 21:41:52,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:47:12] 2025-06-02 21:41:52,612 | INFO     | **************************************
[2025-06-02 23:47:12] 2025-06-02 21:41:52,612 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:47:12] 2025-06-02 21:41:52,612 | INFO     | **************************************
[2025-06-02 23:47:12] 2025-06-02 21:41:52,612 | INFO     | 
[2025-06-02 23:47:12] 2025-06-02 21:41:52,613 | INFO     | pilot is running in a VM
[2025-06-02 23:47:12] 2025-06-02 21:41:52,613 | INFO     | architecture information:
[2025-06-02 23:47:12] 2025-06-02 21:41:52,627 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:47:12] 2025-06-02 21:41:52,858 | INFO     | cat /etc/os-release:
[2025-06-02 23:47:12] NAME="CentOS Linux"
[2025-06-02 23:47:12] VERSION="7 (Core)"
[2025-06-02 23:47:12] ID="centos"
[2025-06-02 23:47:12] ID_LIKE="rhel fedora"
[2025-06-02 23:47:12] VERSION_ID="7"
[2025-06-02 23:47:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:47:12] ANSI_COLOR="0;31"
[2025-06-02 23:47:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:47:12] HOME_URL="https://www.centos.org/"
[2025-06-02 23:47:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:47:12] 
[2025-06-02 23:47:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:47:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:47:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:47:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:47:12] 
[2025-06-02 23:47:12] 2025-06-02 21:41:52,859 | INFO     | **************************************
[2025-06-02 23:47:12] 2025-06-02 21:41:53,363 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-02 23:47:12] 2025-06-02 21:41:53,464 | INFO     | sufficient remaining disk space (496832086016 B)
[2025-06-02 23:47:12] 2025-06-02 21:41:53,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:47:12] 2025-06-02 21:41:53,464 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:47:12] 2025-06-02 21:41:53,464 | INFO     | update_server=False
[2025-06-02 23:47:12] 2025-06-02 21:41:53,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:47:12] 2025-06-02 21:41:53,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:47:12] 2025-06-02 21:41:53,466 | INFO     | aborting loop
[2025-06-02 23:47:12] 2025-06-02 21:41:53,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:47:12] 2025-06-02 21:41:53,566 | INFO     | all data control threads have been joined
[2025-06-02 23:47:12] 2025-06-02 21:41:54,158 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:47:12] 2025-06-02 21:41:54,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:47:12] 2025-06-02 21:41:54,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:47:12] 2025-06-02 21:41:54,471 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:54,472 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:54,572 | INFO     | [data] control thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:54,601 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:54,689 | INFO     | all job control threads have been joined
[2025-06-02 23:47:12] 2025-06-02 21:41:54,809 | INFO     | all payload control threads have been joined
[2025-06-02 23:47:12] 2025-06-02 21:41:54,815 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,108 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,222 | INFO     | [job] validate thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,327 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,474 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:47:12] 2025-06-02 21:41:55,695 | INFO     | [job] control thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,706 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,814 | INFO     | [payload] control thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:55,828 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:56,036 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:56,513 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:41:56,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:47:12] 2025-06-02 21:42:00,662 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:47:12] 2025-06-02 21:42:02,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407712782144)>', '<ExcThread(monitor, started 140407404996352)>']
[2025-06-02 23:47:12] 2025-06-02 21:42:02,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:47:12] 2025-06-02 21:42:02,206 | INFO     | [monitor] control thread has ended
[2025-06-02 23:47:12] 2025-06-02 21:42:07,032 | INFO     | all workflow threads have been joined
[2025-06-02 23:47:12] 2025-06-02 21:42:07,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:47:12] 2025-06-02 21:42:07,032 | INFO     | traces error code: 0
[2025-06-02 23:47:12] 2025-06-02 21:42:07,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:47:12] 2025-06-02 21:42:07,350 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:47:12] 2025-06-02 21:42:07,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:47:12] 2025-06-02 21:42:07,534 [wrapper] pilotpid: 32497
[2025-06-02 23:47:12] 2025-06-02 21:42:07,625 [wrapper] Pilot exit status: 0
[2025-06-02 23:47:12] 2025-06-02 21:42:07,949 [wrapper] pandaids: 6677378527
[2025-06-02 23:47:12] 2025-06-02 21:42:08,607 [wrapper] cleanup supervisor_pilot 31683 32498
[2025-06-02 23:47:12] 2025-06-02 21:42:08,617 [wrapper] Test setup, not cleaning
[2025-06-02 23:47:12] 2025-06-02 21:42:08,636 [wrapper] apfmon messages muted
[2025-06-02 23:47:12] 2025-06-02 21:42:08,708 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:47:12] 2025-06-02 21:42:08,815 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:47:12]  *** Error codes and diagnostics ***
[2025-06-02 23:47:12]     "exeErrorCode": 0,
[2025-06-02 23:47:12]     "exeErrorDiag": "",
[2025-06-02 23:47:12]     "pilotErrorCode": 0,
[2025-06-02 23:47:12]     "pilotErrorDiag": "",
[2025-06-02 23:47:12]  *** Listing of results directory ***
[2025-06-02 23:47:12] total 387168
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-02 23:47:12] -rwx------. 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc       100 Jun  2 19:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:47:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 19:48 run_atlas
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc       105 Jun  2 19:48 job.xml
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc      6391 Jun  2 19:48 init_data.xml
[2025-06-02 23:47:12] -rw-r--r--. 2 boinc boinc 213190810 Jun  2 19:48 EVNT.45006593._000050.pool.root.1
[2025-06-02 23:47:12] -rw-r--r--. 2 boinc boinc     15093 Jun  2 19:48 start_atlas.sh
[2025-06-02 23:47:12] drwxrwx--x. 2 boinc boinc        68 Jun  2 19:48 shared
[2025-06-02 23:47:12] -rw-r--r--. 2 boinc boinc    508871 Jun  2 19:48 input.tar.gz
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc         0 Jun  2 19:48 boinc_lockfile
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc      2521 Jun  2 20:03 pandaJob.out
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc    988298 Jun  2 20:04 agis_schedconf.cvmfs.json
[2025-06-02 23:47:12] drwx------. 4 boinc boinc      4096 Jun  2 20:04 pilot3
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc 176433147 Jun  2 23:38 HITS.45006595._001234.pool.root.1
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc       531 Jun  2 23:39 boinc_task_state.xml
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc      1016 Jun  2 23:40 memory_monitor_summary.json
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc   1603667 Jun  2 23:40 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc    370332 Jun  2 23:40 log.45006595._001234.job.log.tgz.1
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc        95 Jun  2 23:41 pilot_heartbeat.json
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc      7686 Jun  2 23:41 heartbeat.json
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc      4416 Jun  2 23:42 pilotlog.txt
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc   1136628 Jun  2 23:42 log.45006595._001234.job.log.1
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc       357 Jun  2 23:42 output.list
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:42 runtime_log
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc   1525760 Jun  2 23:42 result.tar.gz
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc      8659 Jun  2 23:42 runtime_log.err
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc       656 Jun  2 23:42 cghMDmmbMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms4eKDmnRdUxm.diag
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:47 boinc_mmap_file
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc        28 Jun  2 23:47 wrapper_checkpoint.txt
[2025-06-02 23:47:12] -rw-r--r--. 1 boinc boinc     20473 Jun  2 23:47 stderr.txt
[2025-06-02 23:47:12] HITS file was successfully produced:
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc 176433147 Jun  2 23:38 shared/HITS.pool.root.1
[2025-06-02 23:47:12]  *** Contents of shared directory: ***
[2025-06-02 23:47:12] total 382504
[2025-06-02 23:47:12] -rw-r--r--. 2 boinc boinc 213190810 Jun  2 19:48 ATLAS.root_0
[2025-06-02 23:47:12] -rw-r--r--. 2 boinc boinc     15093 Jun  2 19:48 start_atlas.sh
[2025-06-02 23:47:12] -rw-r--r--. 2 boinc boinc    508871 Jun  2 19:48 input.tar.gz
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc 176433147 Jun  2 23:38 HITS.pool.root.1
[2025-06-02 23:47:12] -rw-------. 1 boinc boinc   1525760 Jun  2 23:42 result.tar.gz
23:47:14 (21942): run_atlas exited; CPU time 49063.234742
23:47:14 (21942): called boinc_finish(0)

</stderr_txt>
]]>

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