Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:07:49 (24750): wrapper (7.7.26015): starting
20:07:49 (24750): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:07:49] Arguments: --nthreads 8
[2025-06-02 20:07:49] Threads: 8
[2025-06-02 20:07:49] Checking for CVMFS
[2025-06-02 20:07:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:07:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:07:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:07:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:07:51] 2.11.2.0 9777 30690 90652 146714 3 16 13398717 25165825 4635 130560 0 16222408 99.887 16396386 1945 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:07:51] CVMFS is ok
[2025-06-02 20:07:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:07:51] Checking for apptainer binary...
[2025-06-02 20:07:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:07:51] Running /usr/bin/apptainer --version
[2025-06-02 20:07:51] apptainer version 1.3.2-1.el7
[2025-06-02 20:07:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:08:05] cg-vwn477.simple-grid.lan
[2025-06-02 20:08:05] apptainer works
[2025-06-02 20:08:05] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:08:05] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:08:05] Starting ATLAS job with PandaID=6677384561
[2025-06-02 20:08:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:39:23]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:39:23] 2025-06-02 21:47:26,353 | INFO     | .. there are 9 such processes running
[2025-06-03 02:39:23] 2025-06-02 21:47:27,881 | INFO     | monitor loop #984: job 0:6677384561 is in state 'finished'
[2025-06-03 02:39:23] 2025-06-02 21:47:27,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,003 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 02:39:23] 2025-06-02 21:47:29,003 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677384561/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,004 | INFO     | extracted standard info from prmon json
[2025-06-03 02:39:23] 2025-06-02 21:47:29,004 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:39:23] 2025-06-02 21:47:29,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:39:23] 2025-06-02 21:47:29,005 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:39:23] 2025-06-02 21:47:29,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:39:23] 2025-06-02 21:47:29,009 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:39:23] 2025-06-02 21:47:29,010 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,011 | INFO     | sum of deviations: 5512231083.999996
[2025-06-03 02:39:23] 2025-06-02 21:47:29,011 | INFO     | mean x: 1748894539.0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,011 | INFO     | mean y: 2507517.8374384237
[2025-06-03 02:39:23] 2025-06-02 21:47:29,012 | INFO     | -- intersect: -3714000197.202856
[2025-06-03 02:39:23] 2025-06-02 21:47:29,012 | INFO     | intersect: -3714000197.202856
[2025-06-03 02:39:23] 2025-06-02 21:47:29,012 | INFO     | chi2: 3.6732074279005023
[2025-06-03 02:39:23] 2025-06-02 21:47:29,012 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 02:39:23] 2025-06-02 21:47:29,014 | INFO     | sum of deviations: 5759030160.499996
[2025-06-03 02:39:23] 2025-06-02 21:47:29,014 | INFO     | mean x: 1748894386.5
[2025-06-03 02:39:23] 2025-06-02 21:47:29,014 | INFO     | mean y: 2507719.1565656564
[2025-06-03 02:39:23] 2025-06-02 21:47:29,014 | INFO     | -- intersect: -4182054406.4586024
[2025-06-03 02:39:23] 2025-06-02 21:47:29,014 | INFO     | intersect: -4182054406.4586024
[2025-06-03 02:39:23] 2025-06-02 21:47:29,014 | INFO     | chi2: 3.675709868603156
[2025-06-03 02:39:23] 2025-06-02 21:47:29,015 | INFO     | current chi2=3.675709868603156 (change=-0.06812685511975101 %)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,015 | INFO     | right removable region: 197
[2025-06-03 02:39:23] 2025-06-02 21:47:29,015 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 02:39:23] 2025-06-02 21:47:29,016 | INFO     | sum of deviations: -51503283747.000015
[2025-06-03 02:39:23] 2025-06-02 21:47:29,016 | INFO     | mean x: 1748894691.5
[2025-06-03 02:39:23] 2025-06-02 21:47:29,017 | INFO     | mean y: 2553777.5757575757
[2025-06-03 02:39:23] 2025-06-02 21:47:29,017 | INFO     | -- intersect: 37425300679.698425
[2025-06-03 02:39:23] 2025-06-02 21:47:29,017 | INFO     | intersect: 37425300679.698425
[2025-06-03 02:39:23] 2025-06-02 21:47:29,017 | INFO     | chi2: 0.2510821595134144
[2025-06-03 02:39:23] 2025-06-02 21:47:29,017 | INFO     | current chi2=0.2510821595134144 (change=93.16449820921424 %)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,018 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,028 | INFO     | sum of deviations: -52809439537.00001
[2025-06-03 02:39:23] 2025-06-02 21:47:29,028 | INFO     | mean x: 1748894844.0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,029 | INFO     | mean y: 2554825.160621762
[2025-06-03 02:39:23] 2025-06-02 21:47:29,029 | INFO     | -- intersect: 41434618375.39336
[2025-06-03 02:39:23] 2025-06-02 21:47:29,029 | INFO     | intersect: 41434618375.39336
[2025-06-03 02:39:23] 2025-06-02 21:47:29,029 | INFO     | chi2: 0.19801919887995748
[2025-06-03 02:39:23] 2025-06-02 21:47:29,029 | INFO     | current chi2=0.19801919887995748 (change=21.13370409761111 %)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,029 | INFO     | left removable region: 20
[2025-06-03 02:39:23] 2025-06-02 21:47:29,030 | INFO     | sum of square deviations: 1719429448.0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,031 | INFO     | sum of deviations: -40436304823.0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,031 | INFO     | mean x: 1748894966.0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,031 | INFO     | mean y: 2546248.9491525423
[2025-06-03 02:39:23] 2025-06-02 21:47:29,031 | INFO     | -- intersect: 41131799927.16475
[2025-06-03 02:39:23] 2025-06-02 21:47:29,031 | INFO     | intersect: 41131799927.16475
[2025-06-03 02:39:23] 2025-06-02 21:47:29,031 | INFO     | chi2: 0.18699106307173344
[2025-06-03 02:39:23] 2025-06-02 21:47:29,032 | INFO     | -- intersect: 41131799927.16475
[2025-06-03 02:39:23] 2025-06-02 21:47:29,032 | INFO     | current memory leak: -23.52 B/s (using 177 data points, chi2=0.19)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,032 | INFO     | ..............................
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . Timing measurements:
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . get job = 0 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . initial setup = 6 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . payload setup = 178 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . stage-in = 0 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . payload execution = 12540 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . stage-out = 3 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | . log creation = 1 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,033 | INFO     | ..............................
[2025-06-03 02:39:23] 2025-06-02 21:47:29,364 | INFO     | 
[2025-06-03 02:39:23] 2025-06-02 21:47:29,364 | INFO     | job summary report
[2025-06-03 02:39:23] 2025-06-02 21:47:29,364 | INFO     | --------------------------------------------------
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | PanDA job id: 6677384561
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | task id: 45006595
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | errors: (none)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | pilot state: finished 
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | transexitcode: 0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | exeerrorcode: 0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | exeerrordiag: 
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | exitcode: 0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | exitmsg: OK
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | cpuconsumptiontime: 45474 s
[2025-06-03 02:39:23] 2025-06-02 21:47:29,365 | INFO     | nevents: 400
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | neventsw: 0
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | pid: 10022
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | pgrp: 10022
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | corecount: 8
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | event service: False
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 22: 2405233, 33: 2405261, 44: 2405317, 55: 2405473, 65: 2405501, 76: 2405529, 84: 2405791, 87: 2405819, 12723: 2435275
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | --------------------------------------------------
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | 
[2025-06-03 02:39:23] 2025-06-02 21:47:29,366 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 02:39:23] 2025-06-02 21:47:29,911 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:39:23] 2025-06-02 21:47:29,913 | INFO     | job 6677384561 has completed (purged errors)
[2025-06-03 02:39:23] 2025-06-02 21:47:29,913 | INFO     | overall cleanup function is called
[2025-06-03 02:39:23] 2025-06-02 21:47:30,921 | INFO     | --- collectZombieJob: --- 10, [10022]
[2025-06-03 02:39:23] 2025-06-02 21:47:30,921 | INFO     | zombie collector waiting for pid 10022
[2025-06-03 02:39:23] 2025-06-02 21:47:30,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:39:23] 2025-06-02 21:47:30,922 | INFO     | collected zombie processes
[2025-06-03 02:39:23] 2025-06-02 21:47:30,922 | INFO     | will attempt to kill all subprocesses of pid=10022
[2025-06-03 02:39:23] 2025-06-02 21:47:31,020 | INFO     | process IDs to be killed: [10022] (in reverse order)
[2025-06-03 02:39:23] 2025-06-02 21:47:31,786 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:39:23] 2025-06-02 21:47:31,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:39:23] 2025-06-02 21:47:31,789 | INFO     | did not find any defunct processes belonging to 10022
[2025-06-03 02:39:23] 2025-06-02 21:47:31,792 | INFO     | did not find any defunct processes belonging to 10022
[2025-06-03 02:39:23] 2025-06-02 21:47:31,792 | INFO     | ready for new job
[2025-06-03 02:39:23] 2025-06-02 21:47:31,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:39:23] 2025-06-02 21:47:31,794 | INFO     | **************************************
[2025-06-03 02:39:23] 2025-06-02 21:47:31,801 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:39:23] 2025-06-02 21:47:31,801 | INFO     | **************************************
[2025-06-03 02:39:23] 2025-06-02 21:47:31,802 | INFO     | 
[2025-06-03 02:39:23] 2025-06-02 21:47:31,802 | INFO     | pilot is running in a VM
[2025-06-03 02:39:23] 2025-06-02 21:47:31,802 | INFO     | architecture information:
[2025-06-03 02:39:23] 2025-06-02 21:47:31,815 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:39:23] 2025-06-02 21:47:32,043 | INFO     | cat /etc/os-release:
[2025-06-03 02:39:23] NAME="CentOS Linux"
[2025-06-03 02:39:23] VERSION="7 (Core)"
[2025-06-03 02:39:23] ID="centos"
[2025-06-03 02:39:23] ID_LIKE="rhel fedora"
[2025-06-03 02:39:23] VERSION_ID="7"
[2025-06-03 02:39:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:39:23] ANSI_COLOR="0;31"
[2025-06-03 02:39:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:39:23] HOME_URL="https://www.centos.org/"
[2025-06-03 02:39:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:39:23] 
[2025-06-03 02:39:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:39:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:39:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:39:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:39:23] 
[2025-06-03 02:39:23] 2025-06-02 21:47:32,043 | INFO     | **************************************
[2025-06-03 02:39:23] 2025-06-02 21:47:32,547 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 02:39:23] 2025-06-02 21:47:32,677 | INFO     | sufficient remaining disk space (497017683968 B)
[2025-06-03 02:39:23] 2025-06-02 21:47:32,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:39:23] 2025-06-02 21:47:32,678 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:39:23] 2025-06-02 21:47:32,678 | INFO     | update_server=False
[2025-06-03 02:39:23] 2025-06-02 21:47:32,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:39:23] 2025-06-02 21:47:32,678 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 02:39:23] 2025-06-02 21:47:32,678 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:39:23] 2025-06-02 21:47:32,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:39:23] 2025-06-02 21:47:32,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:39:23] 2025-06-02 21:47:32,900 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 02:39:23] 2025-06-02 21:47:32,900 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 02:39:23] 2025-06-02 21:47:32,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:39:23] 2025-06-02 21:47:32,901 | INFO     | will abort loop
[2025-06-03 02:39:23] 2025-06-02 21:47:32,946 | INFO     | all payload control threads have been joined
[2025-06-03 02:39:23] 2025-06-02 21:47:33,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:39:23] 2025-06-02 21:47:33,609 | INFO     | all data control threads have been joined
[2025-06-03 02:39:23] 2025-06-02 21:47:33,683 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:33,906 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:33,910 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:33,952 | INFO     | [payload] control thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:34,010 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:34,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:39:23] 2025-06-02 21:47:34,271 | INFO     | all job control threads have been joined
[2025-06-03 02:39:23] 2025-06-02 21:47:34,576 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:34,615 | INFO     | [data] control thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:34,691 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:34,827 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:34,879 | INFO     | [job] validate thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:35,062 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:35,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:39:23] 2025-06-02 21:47:35,199 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:35,277 | INFO     | [job] control thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:35,497 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:39,109 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:43,444 | INFO     | job.realtimelogging is not enabled
[2025-06-03 02:39:23] 2025-06-02 21:47:44,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:39:23] 2025-06-02 21:47:45,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697744623424)>', '<ExcThread(monitor, started 140697457899264)>']
[2025-06-03 02:39:23] 2025-06-02 21:47:45,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:39:23] 2025-06-02 21:47:45,754 | INFO     | [monitor] control thread has ended
[2025-06-03 02:39:23] 2025-06-02 21:47:50,074 | INFO     | all workflow threads have been joined
[2025-06-03 02:39:23] 2025-06-02 21:47:50,074 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:39:23] 2025-06-02 21:47:50,075 | INFO     | traces error code: 0
[2025-06-03 02:39:23] 2025-06-02 21:47:50,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:39:23] 2025-06-02 21:47:50,370 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:39:23] 2025-06-02 21:47:50,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:39:23] 2025-06-02 21:47:50,591 [wrapper] pilotpid: 31823
[2025-06-03 02:39:23] 2025-06-02 21:47:50,714 [wrapper] Pilot exit status: 0
[2025-06-03 02:39:23] 2025-06-02 21:47:51,231 [wrapper] pandaids: 6677384561
[2025-06-03 02:39:23] 2025-06-02 21:47:52,184 [wrapper] cleanup supervisor_pilot  8600 31824
[2025-06-03 02:39:23] 2025-06-02 21:47:52,227 [wrapper] Test setup, not cleaning
[2025-06-03 02:39:23] 2025-06-02 21:47:52,339 [wrapper] apfmon messages muted
[2025-06-03 02:39:23] 2025-06-02 21:47:52,449 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:39:23] 2025-06-02 21:47:52,553 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:39:23]  *** Error codes and diagnostics ***
[2025-06-03 02:39:23]     "exeErrorCode": 0,
[2025-06-03 02:39:23]     "exeErrorDiag": "",
[2025-06-03 02:39:23]     "pilotErrorCode": 0,
[2025-06-03 02:39:23]     "pilotErrorDiag": "",
[2025-06-03 02:39:23]  *** Listing of results directory ***
[2025-06-03 02:39:23] total 395556
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:50 queuedata.json
[2025-06-03 02:39:23] -rwx------. 1 boinc boinc     37140 Jun  2 18:51 runpilot2-wrapper.sh
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:39:23] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:07 run_atlas
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:07 job.xml
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc      6392 Jun  2 20:07 init_data.xml
[2025-06-03 02:39:23] -rw-r--r--. 2 boinc boinc 216621041 Jun  2 20:07 EVNT.45006593._000174.pool.root.1
[2025-06-03 02:39:23] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:07 start_atlas.sh
[2025-06-03 02:39:23] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:07 shared
[2025-06-03 02:39:23] -rw-r--r--. 2 boinc boinc    508876 Jun  2 20:07 input.tar.gz
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:07 boinc_lockfile
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc      2521 Jun  2 20:08 pandaJob.out
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc    988298 Jun  2 20:10 agis_schedconf.cvmfs.json
[2025-06-03 02:39:23] drwx------. 4 boinc boinc      4096 Jun  2 20:11 pilot3
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc 181589997 Jun  2 23:45 HITS.45006595._004351.pool.root.1
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc       531 Jun  2 23:45 boinc_task_state.xml
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc      1018 Jun  2 23:45 memory_monitor_summary.json
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc   1603667 Jun  2 23:46 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc    389354 Jun  2 23:46 log.45006595._004351.job.log.tgz.1
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc        95 Jun  2 23:46 pilot_heartbeat.json
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc      7693 Jun  2 23:47 heartbeat.json
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc      4797 Jun  2 23:47 pilotlog.txt
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc   1117014 Jun  2 23:47 log.45006595._004351.job.log.1
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc       357 Jun  2 23:47 output.list
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:47 runtime_log
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc   1525760 Jun  2 23:47 result.tar.gz
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc      8659 Jun  2 23:47 runtime_log.err
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc       656 Jun  2 23:47 a5jLDm0YNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFXfKDmlxdK4n.diag
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc      8192 Jun  3 02:39 boinc_mmap_file
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc        28 Jun  3 02:39 wrapper_checkpoint.txt
[2025-06-03 02:39:23] -rw-r--r--. 1 boinc boinc     20712 Jun  3 02:39 stderr.txt
[2025-06-03 02:39:23] HITS file was successfully produced:
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc 181589997 Jun  2 23:45 shared/HITS.pool.root.1
[2025-06-03 02:39:23]  *** Contents of shared directory: ***
[2025-06-03 02:39:23] total 390888
[2025-06-03 02:39:23] -rw-r--r--. 2 boinc boinc 216621041 Jun  2 20:07 ATLAS.root_0
[2025-06-03 02:39:23] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:07 start_atlas.sh
[2025-06-03 02:39:23] -rw-r--r--. 2 boinc boinc    508876 Jun  2 20:07 input.tar.gz
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc 181589997 Jun  2 23:45 HITS.pool.root.1
[2025-06-03 02:39:23] -rw-------. 1 boinc boinc   1525760 Jun  2 23:47 result.tar.gz
02:39:25 (24750): run_atlas exited; CPU time 45619.228144
02:39:25 (24750): called boinc_finish(0)

</stderr_txt>
]]>

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