Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:54:53 (881667): wrapper (7.7.26015): starting
10:54:53 (881667): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 10:54:53] Arguments: --nthreads 12
[2025-06-02 10:54:53] Threads: 12
[2025-06-02 10:54:53] Checking for CVMFS
[2025-06-02 10:54:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 10:54:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 10:54:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 10:54:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 10:54:54] 2.11.5.0 2633 48340 243200 146714 2 871 39041055 45568000 13580 130560 0 398366156 99.787 274862517 23853 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 10:54:54] CVMFS is ok
[2025-06-02 10:54:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 10:54:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 10:54:54] Further information can be found at the LHC@home message board.
[2025-06-02 10:54:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 10:54:54] Checking for apptainer binary...
[2025-06-02 10:54:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 10:54:54] Running /usr/bin/apptainer --version
[2025-06-02 10:54:54] apptainer version 1.4.0-1.el9
[2025-06-02 10:54:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 10:54:54] wns0112.triumf.lcg
[2025-06-02 10:54:54] apptainer works
[2025-06-02 10:54:54] Set ATHENA_PROC_NUMBER=12
[2025-06-02 10:54:54] Set ATHENA_CORE_NUMBER=12
[2025-06-02 10:54:54] Starting ATLAS job with PandaID=6677379140
[2025-06-02 10:54:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 10:58:16]  *** The last 200 lines of the pilot log: ***
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | WARNING  | found no stored workdir sizes
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | WARNING  | wrong length of table data, x=[1748886942.0], y=[1043.0] (must be same and length>=4)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | ..............................
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . Timing measurements:
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . get job = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . initial setup = 3 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . payload setup = 6 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . stage-in = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . payload execution = 27 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . stage-out = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . log creation = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | ..............................
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677379140/pilotlog.txt
[2025-06-02 10:58:16] 2025-06-02 17:58:03,154 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 10:58:16] - Log from pilotlog.txt -
[2025-06-02 10:58:16] 2025-06-02 17:58:03,139 | INFO     | extracted standard info from prmon json
[2025-06-02 10:58:16] 2025-06-02 17:58:03,139 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:58:16] 2025-06-02 17:58:03,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | WARNING  | found no stored workdir sizes
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | WARNING  | wrong length of table data, x=[1748886942.0], y=[1043.0] (must be same and length>=4)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | ..............................
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . Timing measurements:
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . get job = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . initial setup = 3 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . payload setup = 6 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . stage-in = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . payload execution = 27 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . stage-out = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . log creation = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | ..............................
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677379140/pilotlog.txt
[2025-06-02 10:58:16] 2025-06-02 17:58:03,154 | WARNING  | 
[2025-06-02 10:58:16] [begin log extracts]
[2025-06-02 10:58:16] - Log from pilotlog.txt -
[2025-06-02 10:58:16] 2025-06-02 17:58:03,139 | INFO     | extracted standard info from prmon json
[2025-06-02 10:58:16] 2025-06-02 17:58:03,139 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:58:16] 2025-06-02 17:58:03,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | WARNING  | found no stored workdir sizes
[2025-06-02 10:58:16] 2025-06-02 17:58:03,140 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | WARNING  | wrong length of table data, x=[1748886942.0], y=[1043.0] (must be same and length>=4)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | ..............................
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . Timing measurements:
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . get job = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . initial setup = 3 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . payload setup = 6 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,141 | INFO     | . stage-in = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . payload execution = 27 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . stage-out = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | . log creation = 0 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | ..............................
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:58:16] 2025-06-02 17:58:03,142 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677379140/pilotlog.txt
[2025-06-02 10:58:16] [end log extracts]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,155 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,155 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 10:58:16] 2025-06-02 17:58:03,555 | INFO     | 
[2025-06-02 10:58:16] 2025-06-02 17:58:03,555 | INFO     | job summary report
[2025-06-02 10:58:16] 2025-06-02 17:58:03,555 | INFO     | --------------------------------------------------
[2025-06-02 10:58:16] 2025-06-02 17:58:03,555 | INFO     | PanDA job id: 6677379140
[2025-06-02 10:58:16] 2025-06-02 17:58:03,555 | INFO     | task id: 45006595
[2025-06-02 10:58:16] 2025-06-02 17:58:03,555 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 10:55:52,063 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 10:58:16] 2025-06-02 17:58:03,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | pilot state: failed 
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | transexitcode: 65
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | exeerrorcode: 65
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | exitcode: 65
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | cpuconsumptiontime: 20 s
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | nevents: 0
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | neventsw: 0
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | pid: 894000
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | pgrp: 894000
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | corecount: 12
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | event service: False
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | sizes: {0: 2404348, 1: 2405201, 5: 2405407, 12: 2405463, 37: 2428607, 38: 2432842, 40: 2432998, 160: 2433140}
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | --------------------------------------------------
[2025-06-02 10:58:16] 2025-06-02 17:58:03,556 | INFO     | 
[2025-06-02 10:58:16] 2025-06-02 17:58:03,557 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 10:58:16] 2025-06-02 17:58:03,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | job 6677379140 has completed (purged errors)
[2025-06-02 10:58:16] 2025-06-02 17:58:03,575 | INFO     | overall cleanup function is called
[2025-06-02 10:58:16] 2025-06-02 17:58:04,581 | INFO     | --- collectZombieJob: --- 10, [894000]
[2025-06-02 10:58:16] 2025-06-02 17:58:04,581 | INFO     | zombie collector waiting for pid 894000
[2025-06-02 10:58:16] 2025-06-02 17:58:04,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 10:58:16] 2025-06-02 17:58:04,582 | INFO     | collected zombie processes
[2025-06-02 10:58:16] 2025-06-02 17:58:04,582 | INFO     | will attempt to kill all subprocesses of pid=894000
[2025-06-02 10:58:16] 2025-06-02 17:58:04,994 | INFO     | process IDs to be killed: [894000] (in reverse order)
[2025-06-02 10:58:16] 2025-06-02 17:58:05,072 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 10:58:16] 2025-06-02 17:58:05,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 10:58:16] 2025-06-02 17:58:05,094 | INFO     | did not find any defunct processes belonging to 894000
[2025-06-02 10:58:16] 2025-06-02 17:58:05,121 | INFO     | did not find any defunct processes belonging to 894000
[2025-06-02 10:58:16] 2025-06-02 17:58:05,122 | INFO     | ready for new job
[2025-06-02 10:58:16] 2025-06-02 17:58:05,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 10:58:16] 2025-06-02 17:58:05,124 | INFO     | **************************************
[2025-06-02 10:58:16] 2025-06-02 17:58:05,124 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 10:58:16] 2025-06-02 17:58:05,124 | INFO     | **************************************
[2025-06-02 10:58:16] 2025-06-02 17:58:05,124 | INFO     | 
[2025-06-02 10:58:16] 2025-06-02 17:58:05,127 | INFO     | architecture information:
[2025-06-02 10:58:16] 2025-06-02 17:58:05,129 | INFO     | executing command: cat /etc/os-release
[2025-06-02 10:58:16] 2025-06-02 17:58:05,144 | INFO     | cat /etc/os-release:
[2025-06-02 10:58:16] NAME="CentOS Linux"
[2025-06-02 10:58:16] VERSION="7 (Core)"
[2025-06-02 10:58:16] ID="centos"
[2025-06-02 10:58:16] ID_LIKE="rhel fedora"
[2025-06-02 10:58:16] VERSION_ID="7"
[2025-06-02 10:58:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 10:58:16] ANSI_COLOR="0;31"
[2025-06-02 10:58:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 10:58:16] HOME_URL="https://www.centos.org/"
[2025-06-02 10:58:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 10:58:16] 
[2025-06-02 10:58:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 10:58:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 10:58:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 10:58:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 10:58:16] 
[2025-06-02 10:58:16] 2025-06-02 17:58:05,144 | INFO     | **************************************
[2025-06-02 10:58:16] 2025-06-02 17:58:05,176 | INFO     | PID=885226 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-02 10:58:16] 2025-06-02 17:58:05,177 | INFO     | .. there are 18 such processes running
[2025-06-02 10:58:16] 2025-06-02 17:58:05,649 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 10:58:16] 2025-06-02 17:58:05,663 | INFO     | sufficient remaining disk space (1786018529280 B)
[2025-06-02 10:58:16] 2025-06-02 17:58:05,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 10:58:16] 2025-06-02 17:58:05,664 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 10:58:16] 2025-06-02 17:58:05,664 | INFO     | update_server=False
[2025-06-02 10:58:16] 2025-06-02 17:58:05,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 10:58:16] 2025-06-02 17:58:05,664 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 10:58:16] 2025-06-02 17:58:05,664 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 10:58:16] 2025-06-02 17:58:05,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 10:58:16] 2025-06-02 17:58:05,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 10:58:16] 2025-06-02 17:58:05,758 | INFO     | all payload control threads have been joined
[2025-06-02 10:58:16] 2025-06-02 17:58:05,830 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 10:58:16] 2025-06-02 17:58:05,830 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 10:58:16] 2025-06-02 17:58:05,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:58:16] 2025-06-02 17:58:05,830 | INFO     | will abort loop
[2025-06-02 10:58:16] 2025-06-02 17:58:06,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 10:58:16] 2025-06-02 17:58:06,666 | INFO     | all data control threads have been joined
[2025-06-02 10:58:16] 2025-06-02 17:58:06,670 | INFO     | [job] retrieve thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:06,764 | INFO     | [payload] control thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:06,836 | INFO     | [job] job monitor thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:06,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 10:58:16] 2025-06-02 17:58:07,014 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:07,342 | INFO     | all job control threads have been joined
[2025-06-02 10:58:16] 2025-06-02 17:58:07,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:07,480 | INFO     | [payload] validate_post thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:07,497 | INFO     | [data] copytool_in thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:07,542 | INFO     | [job] validate thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:07,672 | INFO     | [data] control thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:07,723 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:07,860 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:08,051 | INFO     | [payload] failed_post thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:08,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:58:16] 2025-06-02 17:58:08,347 | INFO     | [job] control thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:08,971 | INFO     | [data] copytool_out thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:09,258 | INFO     | [job] queue monitor thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:10,598 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 10:58:16] 2025-06-02 17:58:11,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647789942592)>', '<ExcThread(monitor, started 140646950102784)>']
[2025-06-02 10:58:16] 2025-06-02 17:58:11,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 10:58:16] 2025-06-02 17:58:11,704 | INFO     | [monitor] control thread has ended
[2025-06-02 10:58:16] 2025-06-02 17:58:16,335 | INFO     | all workflow threads have been joined
[2025-06-02 10:58:16] 2025-06-02 17:58:16,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 10:58:16] 2025-06-02 17:58:16,336 | INFO     | traces error code: 0
[2025-06-02 10:58:16] 2025-06-02 17:58:16,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 10:58:16] 2025-06-02 17:58:16,516 [wrapper] ==== pilot stdout END ====
[2025-06-02 10:58:16] 2025-06-02 17:58:16,519 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 10:58:16] 2025-06-02 17:58:16,532 [wrapper] pilotpid: 885226
[2025-06-02 10:58:16] 2025-06-02 17:58:16,560 [wrapper] Pilot exit status: 0
[2025-06-02 10:58:16] 2025-06-02 17:58:16,616 [wrapper] pandaids: 6677379140
[2025-06-02 10:58:16] 2025-06-02 17:58:16,727 [wrapper] cleanup supervisor_pilot  885232 885227
[2025-06-02 10:58:16] 2025-06-02 17:58:16,729 [wrapper] Test setup, not cleaning
[2025-06-02 10:58:16] 2025-06-02 17:58:16,732 [wrapper] apfmon messages muted
[2025-06-02 10:58:16] 2025-06-02 17:58:16,735 [wrapper] ==== wrapper stdout END ====
[2025-06-02 10:58:16] 2025-06-02 17:58:16,737 [wrapper] ==== wrapper stderr END ====
[2025-06-02 10:58:16]  *** Error codes and diagnostics ***
[2025-06-02 10:58:16]     "exeErrorCode": 65,
[2025-06-02 10:58:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:58:16]     "pilotErrorCode": 1305,
[2025-06-02 10:58:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:58:16]  *** Listing of results directory ***
[2025-06-02 10:58:16] total 212836
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc    495897 Jun  2 08:48 pilot3.tar.gz
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc      5111 Jun  2 08:49 queuedata.json
[2025-06-02 10:58:16] -rwx------. 1 boinc boinc     37140 Jun  2 08:50 runpilot2-wrapper.sh
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc       100 Jun  2 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 10:58:16] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 10:54 run_atlas
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc       105 Jun  2 10:54 job.xml
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc      6597 Jun  2 10:54 init_data.xml
[2025-06-02 10:58:16] -rw-r--r--. 2 boinc boinc 213916028 Jun  2 10:54 EVNT.45006593._000063.pool.root.1
[2025-06-02 10:58:16] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:54 start_atlas.sh
[2025-06-02 10:58:16] drwxrwx--x. 2 boinc boinc      4096 Jun  2 10:54 shared
[2025-06-02 10:58:16] -rw-r--r--. 2 boinc boinc    508870 Jun  2 10:54 input.tar.gz
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc         0 Jun  2 10:54 boinc_lockfile
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc      2521 Jun  2 10:54 pandaJob.out
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc    988298 Jun  2 10:55 agis_schedconf.cvmfs.json
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc   1603667 Jun  2 10:55 agis_ddmendpoints.agis.ALL.json
[2025-06-02 10:58:16] drwx------. 4 boinc boinc      4096 Jun  2 10:55 pilot3
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc       522 Jun  2 10:55 boinc_task_state.xml
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc       964 Jun  2 10:55 memory_monitor_summary.json
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc     20402 Jun  2 10:56 log.45006595._001560.job.log.tgz.1
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc        95 Jun  2 10:57 pilot_heartbeat.json
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc      8319 Jun  2 10:58 heartbeat.json
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc      8192 Jun  2 10:58 boinc_mmap_file
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc        22 Jun  2 10:58 wrapper_checkpoint.txt
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc      5055 Jun  2 10:58 pilotlog.txt
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc     74381 Jun  2 10:58 log.45006595._001560.job.log.1
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc       188 Jun  2 10:58 output.list
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc       620 Jun  2 10:58 runtime_log
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc    112640 Jun  2 10:58 result.tar.gz
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc      8484 Jun  2 10:58 runtime_log.err
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc       644 Jun  2 10:58 7abLDmjbMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvaVKDmbDws8n.diag
[2025-06-02 10:58:16] -rw-r--r--. 1 boinc boinc     21624 Jun  2 10:58 stderr.txt
[2025-06-02 10:58:16] No HITS result produced
[2025-06-02 10:58:16]  *** Contents of shared directory: ***
[2025-06-02 10:58:16] total 209536
[2025-06-02 10:58:16] -rw-r--r--. 2 boinc boinc 213916028 Jun  2 10:54 ATLAS.root_0
[2025-06-02 10:58:16] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:54 start_atlas.sh
[2025-06-02 10:58:16] -rw-r--r--. 2 boinc boinc    508870 Jun  2 10:54 input.tar.gz
[2025-06-02 10:58:16] -rw-------. 1 boinc boinc    112640 Jun  2 10:58 result.tar.gz
10:58:17 (881667): run_atlas exited; CPU time 25.360727
10:58:17 (881667): called boinc_finish(0)

</stderr_txt>
]]>

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