Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:36:32 (18913): wrapper (7.7.26015): starting
02:36:32 (18913): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:36:32] Arguments: --nthreads 8
[2025-06-03 02:36:32] Threads: 8
[2025-06-03 02:36:32] Checking for CVMFS
[2025-06-03 02:36:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:36:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:36:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:36:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:36:33] 2.11.2.0 12075 31050 89080 146723 1 155 21140588 25165824 4097 130560 0 16148914 99.788 18609090 2126 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:36:33] CVMFS is ok
[2025-06-03 02:36:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:36:33] Checking for apptainer binary...
[2025-06-03 02:36:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:36:33] Running /usr/bin/apptainer --version
[2025-06-03 02:36:33] apptainer version 1.3.2-1.el7
[2025-06-03 02:36:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:36:35] cg-vwn258.simple-grid.lan
[2025-06-03 02:36:35] apptainer works
[2025-06-03 02:36:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:36:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:36:35] Starting ATLAS job with PandaID=6677384218
[2025-06-03 02:36:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:11:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:11:26] 2025-06-03 04:21:41,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:11:26] 2025-06-03 04:21:41,434 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:11:26] 2025-06-03 04:21:41,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:11:26] 2025-06-03 04:21:41,439 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:11:26] 2025-06-03 04:21:41,440 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,441 | INFO     | sum of deviations: -59392132232.00001
[2025-06-03 09:11:26] 2025-06-03 04:21:41,441 | INFO     | mean x: 1748917719.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,442 | INFO     | mean y: 2575807.712328767
[2025-06-03 09:11:26] 2025-06-03 04:21:41,442 | INFO     | -- intersect: 31895664578.086163
[2025-06-03 09:11:26] 2025-06-03 04:21:41,442 | INFO     | intersect: 31895664578.086163
[2025-06-03 09:11:26] 2025-06-03 04:21:41,448 | INFO     | chi2: 2.7378174546885767
[2025-06-03 09:11:26] 2025-06-03 04:21:41,449 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 09:11:26] 2025-06-03 04:21:41,451 | INFO     | sum of deviations: -41941988806.99999
[2025-06-03 09:11:26] 2025-06-03 04:21:41,451 | INFO     | mean x: 1748917566.5
[2025-06-03 09:11:26] 2025-06-03 04:21:41,451 | INFO     | mean y: 2587826.6728971964
[2025-06-03 09:11:26] 2025-06-03 04:21:41,451 | INFO     | -- intersect: 24140966678.202335
[2025-06-03 09:11:26] 2025-06-03 04:21:41,451 | INFO     | intersect: 24140966678.202335
[2025-06-03 09:11:26] 2025-06-03 04:21:41,452 | INFO     | chi2: 1.9728773324939997
[2025-06-03 09:11:26] 2025-06-03 04:21:41,452 | INFO     | current chi2=1.9728773324939997 (change=27.939778120875047 %)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,452 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,454 | INFO     | sum of deviations: -39216711083.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,454 | INFO     | mean x: 1748917414.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,454 | INFO     | mean y: 2589824.3732057414
[2025-06-03 09:11:26] 2025-06-03 04:21:41,454 | INFO     | -- intersect: 24231458217.916008
[2025-06-03 09:11:26] 2025-06-03 04:21:41,454 | INFO     | intersect: 24231458217.916008
[2025-06-03 09:11:26] 2025-06-03 04:21:41,455 | INFO     | chi2: 1.9725669860643589
[2025-06-03 09:11:26] 2025-06-03 04:21:41,455 | INFO     | current chi2=1.9725669860643589 (change=0.015730650077897236 %)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,455 | INFO     | right removable region: 208
[2025-06-03 09:11:26] 2025-06-03 04:21:41,455 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 09:11:26] 2025-06-03 04:21:41,457 | INFO     | sum of deviations: -99665440663.00002
[2025-06-03 09:11:26] 2025-06-03 04:21:41,457 | INFO     | mean x: 1748917871.5
[2025-06-03 09:11:26] 2025-06-03 04:21:41,457 | INFO     | mean y: 2603753.5327102803
[2025-06-03 09:11:26] 2025-06-03 04:21:41,457 | INFO     | -- intersect: 57361891024.05168
[2025-06-03 09:11:26] 2025-06-03 04:21:41,457 | INFO     | intersect: 57361891024.05168
[2025-06-03 09:11:26] 2025-06-03 04:21:41,458 | INFO     | chi2: 1.0200611555166612
[2025-06-03 09:11:26] 2025-06-03 04:21:41,458 | INFO     | current chi2=1.0200611555166612 (change=62.74181268843244 %)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,458 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,460 | INFO     | sum of deviations: -100681186554.99998
[2025-06-03 09:11:26] 2025-06-03 04:21:41,460 | INFO     | mean x: 1748918024.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,460 | INFO     | mean y: 2604459.7464114833
[2025-06-03 09:11:26] 2025-06-03 04:21:41,460 | INFO     | -- intersect: 62205476710.109505
[2025-06-03 09:11:26] 2025-06-03 04:21:41,460 | INFO     | intersect: 62205476710.109505
[2025-06-03 09:11:26] 2025-06-03 04:21:41,461 | INFO     | chi2: 0.9760359649591058
[2025-06-03 09:11:26] 2025-06-03 04:21:41,461 | INFO     | current chi2=0.9760359649591058 (change=4.315936384741228 %)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,461 | INFO     | left removable region: 20
[2025-06-03 09:11:26] 2025-06-03 04:21:41,461 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,463 | INFO     | sum of deviations: -71586568483.00002
[2025-06-03 09:11:26] 2025-06-03 04:21:41,463 | INFO     | mean x: 1748917993.5
[2025-06-03 09:11:26] 2025-06-03 04:21:41,463 | INFO     | mean y: 2614761.840425532
[2025-06-03 09:11:26] 2025-06-03 04:21:41,463 | INFO     | -- intersect: 60768706776.89228
[2025-06-03 09:11:26] 2025-06-03 04:21:41,463 | INFO     | intersect: 60768706776.89228
[2025-06-03 09:11:26] 2025-06-03 04:21:41,463 | INFO     | chi2: 0.1698293161565178
[2025-06-03 09:11:26] 2025-06-03 04:21:41,464 | INFO     | -- intersect: 60768706776.89228
[2025-06-03 09:11:26] 2025-06-03 04:21:41,464 | INFO     | current memory leak: -34.74 B/s (using 188 data points, chi2=0.17)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | ..............................
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . Timing measurements:
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . get job = 0 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . initial setup = 2 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . payload setup = 12 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . stage-in = 0 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . payload execution = 13350 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . stage-out = 3 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | . log creation = 1 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,465 | INFO     | ..............................
[2025-06-03 09:11:26] 2025-06-03 04:21:41,585 | INFO     | 
[2025-06-03 09:11:26] 2025-06-03 04:21:41,585 | INFO     | job summary report
[2025-06-03 09:11:26] 2025-06-03 04:21:41,585 | INFO     | --------------------------------------------------
[2025-06-03 09:11:26] 2025-06-03 04:21:41,585 | INFO     | PanDA job id: 6677384218
[2025-06-03 09:11:26] 2025-06-03 04:21:41,585 | INFO     | task id: 45006595
[2025-06-03 09:11:26] 2025-06-03 04:21:41,585 | INFO     | errors: (none)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,585 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | pilot state: finished 
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | transexitcode: 0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | exeerrorcode: 0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | exeerrordiag: 
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | exitcode: 0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | exitmsg: OK
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | cpuconsumptiontime: 50309 s
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | nevents: 400
[2025-06-03 09:11:26] 2025-06-03 04:21:41,586 | INFO     | neventsw: 0
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | pid: 31184
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | pgrp: 31184
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | corecount: 8
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | event service: False
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | sizes: {0: 2405006, 1: 2405205, 2: 2405205, 10: 2405439, 12: 2405467, 13367: 2435155, 13371: 2444096, 13372: 2444152, 13466: 2444322}
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | --------------------------------------------------
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | 
[2025-06-03 09:11:26] 2025-06-03 04:21:41,587 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 09:11:26] 2025-06-03 04:21:41,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | job 6677384218 has completed (purged errors)
[2025-06-03 09:11:26] 2025-06-03 04:21:41,855 | INFO     | overall cleanup function is called
[2025-06-03 09:11:26] 2025-06-03 04:21:42,154 | INFO     | PID=22671 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 09:11:26] 2025-06-03 04:21:42,155 | INFO     | .. there are 9 such processes running
[2025-06-03 09:11:26] 2025-06-03 04:21:42,864 | INFO     | --- collectZombieJob: --- 10, [31184]
[2025-06-03 09:11:26] 2025-06-03 04:21:42,865 | INFO     | zombie collector waiting for pid 31184
[2025-06-03 09:11:26] 2025-06-03 04:21:42,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:11:26] 2025-06-03 04:21:42,865 | INFO     | collected zombie processes
[2025-06-03 09:11:26] 2025-06-03 04:21:42,865 | INFO     | will attempt to kill all subprocesses of pid=31184
[2025-06-03 09:11:26] 2025-06-03 04:21:42,986 | INFO     | process IDs to be killed: [31184] (in reverse order)
[2025-06-03 09:11:26] 2025-06-03 04:21:43,474 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:11:26] 2025-06-03 04:21:43,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:11:26] 2025-06-03 04:21:43,478 | INFO     | did not find any defunct processes belonging to 31184
[2025-06-03 09:11:26] 2025-06-03 04:21:43,481 | INFO     | did not find any defunct processes belonging to 31184
[2025-06-03 09:11:26] 2025-06-03 04:21:43,481 | INFO     | ready for new job
[2025-06-03 09:11:26] 2025-06-03 04:21:43,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:11:26] 2025-06-03 04:21:43,484 | INFO     | **************************************
[2025-06-03 09:11:26] 2025-06-03 04:21:43,484 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:11:26] 2025-06-03 04:21:43,484 | INFO     | **************************************
[2025-06-03 09:11:26] 2025-06-03 04:21:43,484 | INFO     | 
[2025-06-03 09:11:26] 2025-06-03 04:21:43,485 | INFO     | pilot is running in a VM
[2025-06-03 09:11:26] 2025-06-03 04:21:43,485 | INFO     | architecture information:
[2025-06-03 09:11:26] 2025-06-03 04:21:43,495 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:11:26] 2025-06-03 04:21:43,646 | INFO     | cat /etc/os-release:
[2025-06-03 09:11:26] NAME="CentOS Linux"
[2025-06-03 09:11:26] VERSION="7 (Core)"
[2025-06-03 09:11:26] ID="centos"
[2025-06-03 09:11:26] ID_LIKE="rhel fedora"
[2025-06-03 09:11:26] VERSION_ID="7"
[2025-06-03 09:11:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:11:26] ANSI_COLOR="0;31"
[2025-06-03 09:11:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:11:26] HOME_URL="https://www.centos.org/"
[2025-06-03 09:11:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:11:26] 
[2025-06-03 09:11:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:11:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:11:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:11:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:11:26] 
[2025-06-03 09:11:26] 2025-06-03 04:21:43,646 | INFO     | **************************************
[2025-06-03 09:11:26] 2025-06-03 04:21:44,150 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 09:11:26] 2025-06-03 04:21:44,338 | INFO     | sufficient remaining disk space (497026072576 B)
[2025-06-03 09:11:26] 2025-06-03 04:21:44,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:11:26] 2025-06-03 04:21:44,339 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:11:26] 2025-06-03 04:21:44,339 | INFO     | update_server=False
[2025-06-03 09:11:26] 2025-06-03 04:21:44,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:11:26] 2025-06-03 04:21:44,339 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 09:11:26] 2025-06-03 04:21:44,339 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:11:26] 2025-06-03 04:21:44,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:11:26] 2025-06-03 04:21:44,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:11:26] 2025-06-03 04:21:44,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:11:26] 2025-06-03 04:21:44,343 | INFO     | aborting loop
[2025-06-03 09:11:26] 2025-06-03 04:21:44,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:11:26] 2025-06-03 04:21:44,793 | INFO     | all data control threads have been joined
[2025-06-03 09:11:26] 2025-06-03 04:21:44,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:11:26] 2025-06-03 04:21:45,344 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:45,348 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:45,418 | INFO     | all payload control threads have been joined
[2025-06-03 09:11:26] 2025-06-03 04:21:45,655 | INFO     | all job control threads have been joined
[2025-06-03 09:11:26] 2025-06-03 04:21:45,717 | INFO     | [job] validate thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:45,757 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:45,790 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:45,799 | INFO     | [data] control thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,424 | INFO     | [payload] control thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,515 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:11:26] 2025-06-03 04:21:46,661 | INFO     | [job] control thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,683 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,736 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,785 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:46,888 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:47,606 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:48,353 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:11:26] 2025-06-03 04:21:49,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670437017408)>', '<ExcThread(monitor, started 139669761148672)>']
[2025-06-03 09:11:26] 2025-06-03 04:21:50,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:11:26] 2025-06-03 04:21:50,375 | INFO     | [monitor] control thread has ended
[2025-06-03 09:11:26] 2025-06-03 04:21:54,559 | INFO     | all workflow threads have been joined
[2025-06-03 09:11:26] 2025-06-03 04:21:54,560 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:11:26] 2025-06-03 04:21:54,560 | INFO     | traces error code: 0
[2025-06-03 09:11:26] 2025-06-03 04:21:54,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:11:26] 2025-06-03 04:21:54,972 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:11:26] 2025-06-03 04:21:55,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:11:26] 2025-06-03 04:21:55,160 [wrapper] pilotpid: 22671
[2025-06-03 09:11:26] 2025-06-03 04:21:55,268 [wrapper] Pilot exit status: 0
[2025-06-03 09:11:26] 2025-06-03 04:21:55,705 [wrapper] pandaids: 6677384218
[2025-06-03 09:11:26] 2025-06-03 04:21:56,544 [wrapper] cleanup supervisor_pilot  4547 22672
[2025-06-03 09:11:26] 2025-06-03 04:21:56,662 [wrapper] Test setup, not cleaning
[2025-06-03 09:11:26] 2025-06-03 04:21:56,758 [wrapper] apfmon messages muted
[2025-06-03 09:11:26] 2025-06-03 04:21:56,865 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:11:26] 2025-06-03 04:21:56,973 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:11:26]  *** Error codes and diagnostics ***
[2025-06-03 09:11:26]     "exeErrorCode": 0,
[2025-06-03 09:11:26]     "exeErrorDiag": "",
[2025-06-03 09:11:26]     "pilotErrorCode": 0,
[2025-06-03 09:11:26]     "pilotErrorDiag": "",
[2025-06-03 09:11:26]  *** Listing of results directory ***
[2025-06-03 09:11:26] total 396636
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:41 queuedata.json
[2025-06-03 09:11:26] -rwx------. 1 boinc boinc     37140 Jun  2 18:41 runpilot2-wrapper.sh
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:11:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:36 run_atlas
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:36 job.xml
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc      6390 Jun  3 02:36 init_data.xml
[2025-06-03 09:11:26] -rw-r--r--. 2 boinc boinc 215556518 Jun  3 02:36 EVNT.45006593._000162.pool.root.1
[2025-06-03 09:11:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:36 start_atlas.sh
[2025-06-03 09:11:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:36 shared
[2025-06-03 09:11:26] -rw-r--r--. 2 boinc boinc    508875 Jun  3 02:36 input.tar.gz
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:36 boinc_lockfile
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc      2521 Jun  3 02:36 pandaJob.out
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc    988081 Jun  3 02:36 agis_schedconf.cvmfs.json
[2025-06-03 09:11:26] drwx------. 4 boinc boinc      4096 Jun  3 02:36 pilot3
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc 183675299 Jun  3 06:18 HITS.45006595._004038.pool.root.1
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc       530 Jun  3 06:18 boinc_task_state.xml
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc      1018 Jun  3 06:19 memory_monitor_summary.json
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc   1603667 Jun  3 06:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc    378345 Jun  3 06:20 log.45006595._004038.job.log.tgz.1
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc        95 Jun  3 06:21 pilot_heartbeat.json
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc      7692 Jun  3 06:21 heartbeat.json
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc      4539 Jun  3 06:21 pilotlog.txt
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc   1170240 Jun  3 06:21 log.45006595._004038.job.log.1
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc       357 Jun  3 06:21 output.list
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:21 runtime_log
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc   1566720 Jun  3 06:21 result.tar.gz
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc      8659 Jun  3 06:21 runtime_log.err
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc       656 Jun  3 06:21 IkkKDm2ONg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcTfKDm3rPdzm.diag
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 09:11 boinc_mmap_file
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 09:11 wrapper_checkpoint.txt
[2025-06-03 09:11:26] -rw-r--r--. 1 boinc boinc     20606 Jun  3 09:11 stderr.txt
[2025-06-03 09:11:26] HITS file was successfully produced:
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc 183675299 Jun  3 06:18 shared/HITS.pool.root.1
[2025-06-03 09:11:26]  *** Contents of shared directory: ***
[2025-06-03 09:11:26] total 391928
[2025-06-03 09:11:26] -rw-r--r--. 2 boinc boinc 215556518 Jun  3 02:36 ATLAS.root_0
[2025-06-03 09:11:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:36 start_atlas.sh
[2025-06-03 09:11:26] -rw-r--r--. 2 boinc boinc    508875 Jun  3 02:36 input.tar.gz
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc 183675299 Jun  3 06:18 HITS.pool.root.1
[2025-06-03 09:11:26] -rw-------. 1 boinc boinc   1566720 Jun  3 06:21 result.tar.gz
09:11:28 (18913): run_atlas exited; CPU time 50475.532049
09:11:28 (18913): called boinc_finish(0)

</stderr_txt>
]]>

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