Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:14 (4139411): wrapper (7.7.26015): starting
10:39:14 (4139411): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 10:39:14] Arguments: --nthreads 12
[2025-06-02 10:39:14] Threads: 12
[2025-06-02 10:39:14] Checking for CVMFS
[2025-06-02 10:39:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 10:39:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 10:39:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 10:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 10:39:14] 2.11.5.0 835854 20670 233116 146714 1 415 45473036 45568000 8808 130560 0 190451789 99.796 120419835 31394 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 10:39:14] CVMFS is ok
[2025-06-02 10:39:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 10:39:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 10:39:14] Further information can be found at the LHC@home message board.
[2025-06-02 10:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 10:39:14] Checking for apptainer binary...
[2025-06-02 10:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 10:39:14] Running /usr/bin/apptainer --version
[2025-06-02 10:39:14] apptainer version 1.4.0-1.el9
[2025-06-02 10:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 10:39:14] wns0072.triumf.lcg
[2025-06-02 10:39:14] apptainer works
[2025-06-02 10:39:14] Set ATHENA_PROC_NUMBER=12
[2025-06-02 10:39:14] Set ATHENA_CORE_NUMBER=12
[2025-06-02 10:39:14] Starting ATLAS job with PandaID=6677383905
[2025-06-02 10:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 10:42:14]  *** The last 200 lines of the pilot log: ***
[2025-06-02 10:42:14] 2025-06-02 17:41:59,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | found no stored workdir sizes
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | WARNING  | wrong length of table data, x=[1748885983.0], y=[1041.0] (must be same and length>=4)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | ..............................
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . Timing measurements:
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . get job = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . initial setup = 2 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . payload setup = 3 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . stage-in = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . payload execution = 13 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . stage-out = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . log creation = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | ..............................
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:42:14] 2025-06-02 17:41:59,777 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677383905/pilotlog.txt
[2025-06-02 10:42:14] 2025-06-02 17:41:59,786 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 10:42:14] - Log from pilotlog.txt -
[2025-06-02 10:42:14] 2025-06-02 17:41:59,774 | INFO     | extracted standard info from prmon json
[2025-06-02 10:42:14] 2025-06-02 17:41:59,774 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:42:14] 2025-06-02 17:41:59,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | found no stored workdir sizes
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | WARNING  | wrong length of table data, x=[1748885983.0], y=[1041.0] (must be same and length>=4)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | ..............................
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . Timing measurements:
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . get job = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . initial setup = 2 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . payload setup = 3 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . stage-in = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . payload execution = 13 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . stage-out = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . log creation = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | ..............................
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:42:14] 2025-06-02 17:41:59,777 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677383905/pilotlog.txt
[2025-06-02 10:42:14] 2025-06-02 17:41:59,786 | WARNING  | 
[2025-06-02 10:42:14] [begin log extracts]
[2025-06-02 10:42:14] - Log from pilotlog.txt -
[2025-06-02 10:42:14] 2025-06-02 17:41:59,774 | INFO     | extracted standard info from prmon json
[2025-06-02 10:42:14] 2025-06-02 17:41:59,774 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:42:14] 2025-06-02 17:41:59,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | WARNING  | found no stored workdir sizes
[2025-06-02 10:42:14] 2025-06-02 17:41:59,775 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | WARNING  | wrong length of table data, x=[1748885983.0], y=[1041.0] (must be same and length>=4)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | ..............................
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . Timing measurements:
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . get job = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . initial setup = 2 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . payload setup = 3 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . stage-in = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . payload execution = 13 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . stage-out = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | . log creation = 0 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | ..............................
[2025-06-02 10:42:14] 2025-06-02 17:41:59,776 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:42:14] 2025-06-02 17:41:59,777 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677383905/pilotlog.txt
[2025-06-02 10:42:14] [end log extracts]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,786 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,787 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | 
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | job summary report
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | --------------------------------------------------
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | PanDA job id: 6677383905
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | task id: 45006595
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 10:39:49,722 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | pilot state: failed 
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | transexitcode: 65
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | exeerrorcode: 65
[2025-06-02 10:42:14] 2025-06-02 17:41:59,846 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | exitcode: 65
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | cpuconsumptiontime: 18 s
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | nevents: 0
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | neventsw: 0
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | pid: 4149623
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | pgrp: 4149623
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | corecount: 12
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | event service: False
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | sizes: {0: 2405174, 3: 2405380, 11: 2405408, 21: 2428610, 23: 2432845, 25: 2432873, 144: 2433143}
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | --------------------------------------------------
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | 
[2025-06-02 10:42:14] 2025-06-02 17:41:59,847 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 10:42:14] 2025-06-02 17:41:59,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,860 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 10:42:14] 2025-06-02 17:41:59,862 | INFO     | job 6677383905 has completed (purged errors)
[2025-06-02 10:42:14] 2025-06-02 17:41:59,862 | INFO     | overall cleanup function is called
[2025-06-02 10:42:14] 2025-06-02 17:42:00,868 | INFO     | --- collectZombieJob: --- 10, [4149623]
[2025-06-02 10:42:14] 2025-06-02 17:42:00,868 | INFO     | zombie collector waiting for pid 4149623
[2025-06-02 10:42:14] 2025-06-02 17:42:00,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 10:42:14] 2025-06-02 17:42:00,868 | INFO     | collected zombie processes
[2025-06-02 10:42:14] 2025-06-02 17:42:00,868 | INFO     | will attempt to kill all subprocesses of pid=4149623
[2025-06-02 10:42:14] 2025-06-02 17:42:00,994 | INFO     | process IDs to be killed: [4149623] (in reverse order)
[2025-06-02 10:42:14] 2025-06-02 17:42:01,047 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 10:42:14] 2025-06-02 17:42:01,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 10:42:14] 2025-06-02 17:42:01,053 | INFO     | did not find any defunct processes belonging to 4149623
[2025-06-02 10:42:14] 2025-06-02 17:42:01,058 | INFO     | did not find any defunct processes belonging to 4149623
[2025-06-02 10:42:14] 2025-06-02 17:42:01,059 | INFO     | ready for new job
[2025-06-02 10:42:14] 2025-06-02 17:42:01,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 10:42:14] 2025-06-02 17:42:01,060 | INFO     | **************************************
[2025-06-02 10:42:14] 2025-06-02 17:42:01,060 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 10:42:14] 2025-06-02 17:42:01,060 | INFO     | **************************************
[2025-06-02 10:42:14] 2025-06-02 17:42:01,060 | INFO     | 
[2025-06-02 10:42:14] 2025-06-02 17:42:01,062 | INFO     | architecture information:
[2025-06-02 10:42:14] 2025-06-02 17:42:01,062 | INFO     | executing command: cat /etc/os-release
[2025-06-02 10:42:14] 2025-06-02 17:42:01,072 | INFO     | cat /etc/os-release:
[2025-06-02 10:42:14] NAME="CentOS Linux"
[2025-06-02 10:42:14] VERSION="7 (Core)"
[2025-06-02 10:42:14] ID="centos"
[2025-06-02 10:42:14] ID_LIKE="rhel fedora"
[2025-06-02 10:42:14] VERSION_ID="7"
[2025-06-02 10:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 10:42:14] ANSI_COLOR="0;31"
[2025-06-02 10:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 10:42:14] HOME_URL="https://www.centos.org/"
[2025-06-02 10:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 10:42:14] 
[2025-06-02 10:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 10:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 10:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 10:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 10:42:14] 
[2025-06-02 10:42:14] 2025-06-02 17:42:01,073 | INFO     | **************************************
[2025-06-02 10:42:14] 2025-06-02 17:42:01,576 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 10:42:14] 2025-06-02 17:42:01,588 | INFO     | sufficient remaining disk space (2077216473088 B)
[2025-06-02 10:42:14] 2025-06-02 17:42:01,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 10:42:14] 2025-06-02 17:42:01,588 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 10:42:14] 2025-06-02 17:42:01,588 | INFO     | update_server=False
[2025-06-02 10:42:14] 2025-06-02 17:42:01,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 10:42:14] 2025-06-02 17:42:01,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:42:14] 2025-06-02 17:42:01,725 | INFO     | all payload control threads have been joined
[2025-06-02 10:42:14] 2025-06-02 17:42:01,953 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 10:42:14] 2025-06-02 17:42:01,954 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 10:42:14] 2025-06-02 17:42:01,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:42:14] 2025-06-02 17:42:01,954 | INFO     | will abort loop
[2025-06-02 10:42:14] 2025-06-02 17:42:02,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 10:42:14] 2025-06-02 17:42:02,194 | INFO     | all data control threads have been joined
[2025-06-02 10:42:14] 2025-06-02 17:42:02,554 | INFO     | all job control threads have been joined
[2025-06-02 10:42:14] 2025-06-02 17:42:02,561 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 10:42:14] 2025-06-02 17:42:02,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 10:42:14] 2025-06-02 17:42:02,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 10:42:14] 2025-06-02 17:42:02,594 | INFO     | [job] retrieve thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:02,594 | INFO     | [job] queue monitor thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:02,731 | INFO     | [payload] control thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:02,917 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:02,958 | INFO     | [job] job monitor thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,035 | INFO     | [job] validate thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,151 | INFO     | [data] copytool_in thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,171 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,199 | INFO     | [data] control thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,279 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,331 | INFO     | [payload] failed_post thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,424 | INFO     | [payload] validate_post thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,558 | INFO     | [job] control thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:03,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 10:42:14] 2025-06-02 17:42:03,877 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:04,009 | INFO     | [data] copytool_out thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:07,766 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 10:42:14] 2025-06-02 17:42:08,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838208673600)>', '<ExcThread(monitor, started 139837675919104)>']
[2025-06-02 10:42:14] 2025-06-02 17:42:09,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 10:42:14] 2025-06-02 17:42:09,596 | INFO     | [monitor] control thread has ended
[2025-06-02 10:42:14] 2025-06-02 17:42:13,901 | INFO     | all workflow threads have been joined
[2025-06-02 10:42:14] 2025-06-02 17:42:13,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 10:42:14] 2025-06-02 17:42:13,901 | INFO     | traces error code: 0
[2025-06-02 10:42:14] 2025-06-02 17:42:13,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 10:42:14] 2025-06-02 17:42:14,012 [wrapper] ==== pilot stdout END ====
[2025-06-02 10:42:14] 2025-06-02 17:42:14,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 10:42:14] 2025-06-02 17:42:14,016 [wrapper] pilotpid: 4143053
[2025-06-02 10:42:14] 2025-06-02 17:42:14,018 [wrapper] Pilot exit status: 0
[2025-06-02 10:42:14] 2025-06-02 17:42:14,025 [wrapper] pandaids: 6677383905
[2025-06-02 10:42:14] 2025-06-02 17:42:14,057 [wrapper] cleanup supervisor_pilot 4143059 4143054
[2025-06-02 10:42:14] 2025-06-02 17:42:14,059 [wrapper] Test setup, not cleaning
[2025-06-02 10:42:14] 2025-06-02 17:42:14,061 [wrapper] apfmon messages muted
[2025-06-02 10:42:14] 2025-06-02 17:42:14,063 [wrapper] ==== wrapper stdout END ====
[2025-06-02 10:42:14] 2025-06-02 17:42:14,065 [wrapper] ==== wrapper stderr END ====
[2025-06-02 10:42:14]  *** Error codes and diagnostics ***
[2025-06-02 10:42:14]     "exeErrorCode": 65,
[2025-06-02 10:42:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:42:14]     "pilotErrorCode": 1305,
[2025-06-02 10:42:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:42:14]  *** Listing of results directory ***
[2025-06-02 10:42:14] total 215312
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc    495897 Jun  2 09:11 pilot3.tar.gz
[2025-06-02 10:42:14] -rwx------. 1 boinc boinc     37140 Jun  2 09:33 runpilot2-wrapper.sh
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc      5111 Jun  2 09:33 queuedata.json
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc       100 Jun  2 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 10:42:14] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 10:39 run_atlas
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc       105 Jun  2 10:39 job.xml
[2025-06-02 10:42:14] -rw-r--r--. 2 boinc boinc    508879 Jun  2 10:39 input.tar.gz
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc      6602 Jun  2 10:39 init_data.xml
[2025-06-02 10:42:14] -rw-r--r--. 2 boinc boinc 216450882 Jun  2 10:39 EVNT.45006593._000154.pool.root.1
[2025-06-02 10:42:14] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:39 start_atlas.sh
[2025-06-02 10:42:14] drwxrwx--x. 2 boinc boinc      4096 Jun  2 10:39 shared
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc         0 Jun  2 10:39 boinc_lockfile
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc      2521 Jun  2 10:39 pandaJob.out
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc    988298 Jun  2 10:39 agis_schedconf.cvmfs.json
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc   1603667 Jun  2 10:39 agis_ddmendpoints.agis.ALL.json
[2025-06-02 10:42:14] drwx------. 4 boinc boinc      4096 Jun  2 10:39 pilot3
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc       522 Jun  2 10:39 boinc_task_state.xml
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc       959 Jun  2 10:39 memory_monitor_summary.json
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc     20372 Jun  2 10:39 log.45006595._003842.job.log.tgz.1
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc        95 Jun  2 10:41 pilot_heartbeat.json
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc      8326 Jun  2 10:41 heartbeat.json
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc        22 Jun  2 10:42 wrapper_checkpoint.txt
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc      4538 Jun  2 10:42 pilotlog.txt
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc     73887 Jun  2 10:42 log.45006595._003842.job.log.1
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc       188 Jun  2 10:42 output.list
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc       620 Jun  2 10:42 runtime_log
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc    112640 Jun  2 10:42 result.tar.gz
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc      8192 Jun  2 10:42 boinc_mmap_file
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc       644 Jun  2 10:42 sqNLDmqHNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFRfKDmTr74Eo.diag
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc      8484 Jun  2 10:42 runtime_log.err
[2025-06-02 10:42:14] -rw-r--r--. 1 boinc boinc     21460 Jun  2 10:42 stderr.txt
[2025-06-02 10:42:14] No HITS result produced
[2025-06-02 10:42:14]  *** Contents of shared directory: ***
[2025-06-02 10:42:14] total 212012
[2025-06-02 10:42:14] -rw-r--r--. 2 boinc boinc    508879 Jun  2 10:39 input.tar.gz
[2025-06-02 10:42:14] -rw-r--r--. 2 boinc boinc 216450882 Jun  2 10:39 ATLAS.root_0
[2025-06-02 10:42:14] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:39 start_atlas.sh
[2025-06-02 10:42:14] -rw-------. 1 boinc boinc    112640 Jun  2 10:42 result.tar.gz
10:42:15 (4139411): run_atlas exited; CPU time 18.048361
10:42:15 (4139411): called boinc_finish(0)

</stderr_txt>
]]>

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