Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:35:37 (956232): wrapper (7.7.26015): starting
10:35:37 (956232): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 10:35:37] Arguments: --nthreads 12
[2025-06-02 10:35:37] Threads: 12
[2025-06-02 10:35:37] Checking for CVMFS
[2025-06-02 10:35:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 10:35:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 10:35:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 10:35:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 10:35:38] 2.11.5.0 3715735 21082 298000 146714 0 645 37910000 45568001 12768 130560 0 161333217 99.804 109551500 27143 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 10:35:38] CVMFS is ok
[2025-06-02 10:35:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 10:35:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 10:35:38] Further information can be found at the LHC@home message board.
[2025-06-02 10:35:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 10:35:38] Checking for apptainer binary...
[2025-06-02 10:35:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 10:35:38] Running /usr/bin/apptainer --version
[2025-06-02 10:35:38] apptainer version 1.4.0-1.el9
[2025-06-02 10:35:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 10:35:39] wns0167.triumf.lcg
[2025-06-02 10:35:39] apptainer works
[2025-06-02 10:35:39] Set ATHENA_PROC_NUMBER=12
[2025-06-02 10:35:39] Set ATHENA_CORE_NUMBER=12
[2025-06-02 10:35:39] Starting ATLAS job with PandaID=6677383838
[2025-06-02 10:35:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 10:39:54]  *** The last 200 lines of the pilot log: ***
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:39:54] 2025-06-02 17:39:38,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:39:54] 2025-06-02 17:39:38,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | WARNING  | wrong length of table data, x=[1748885819.0], y=[1551.0] (must be same and length>=4)
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | ..............................
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . Timing measurements:
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . get job = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . initial setup = 3 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . payload setup = 14 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . stage-in = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . payload execution = 35 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | . stage-out = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | . log creation = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | ..............................
[2025-06-02 10:39:54] 2025-06-02 17:39:38,826 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:39:54] 2025-06-02 17:39:38,826 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677383838/pilotlog.txt
[2025-06-02 10:39:54] 2025-06-02 17:39:38,861 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 10:39:54] - Log from pilotlog.txt -
[2025-06-02 10:39:54] 2025-06-02 17:39:38,800 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 10:39:54] 2025-06-02 17:39:38,800 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677383838/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | INFO     | extracted standard info from prmon json
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:39:54] 2025-06-02 17:39:38,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:39:54] 2025-06-02 17:39:38,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | WARNING  | wrong length of table data, x=[1748885819.0], y=[1551.0] (must be same and length>=4)
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | ..............................
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . Timing measurements:
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . get job = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . initial setup = 3 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . payload setup = 14 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . stage-in = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . payload execution = 35 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | . stage-out = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | . log creation = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | ..............................
[2025-06-02 10:39:54] 2025-06-02 17:39:38,826 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:39:54] 2025-06-02 17:39:38,826 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677383838/pilotlog.txt
[2025-06-02 10:39:54] 2025-06-02 17:39:38,861 | WARNING  | 
[2025-06-02 10:39:54] [begin log extracts]
[2025-06-02 10:39:54] - Log from pilotlog.txt -
[2025-06-02 10:39:54] 2025-06-02 17:39:38,800 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 10:39:54] 2025-06-02 17:39:38,800 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677383838/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | INFO     | extracted standard info from prmon json
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 10:39:54] 2025-06-02 17:39:38,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 10:39:54] 2025-06-02 17:39:38,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 10:39:54] 2025-06-02 17:39:38,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | WARNING  | wrong length of table data, x=[1748885819.0], y=[1551.0] (must be same and length>=4)
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | ..............................
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . Timing measurements:
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . get job = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . initial setup = 3 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . payload setup = 14 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . stage-in = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,803 | INFO     | . payload execution = 35 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | . stage-out = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | . log creation = 0 s
[2025-06-02 10:39:54] 2025-06-02 17:39:38,804 | INFO     | ..............................
[2025-06-02 10:39:54] 2025-06-02 17:39:38,826 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 10:39:54] 2025-06-02 17:39:38,826 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677383838/pilotlog.txt
[2025-06-02 10:39:54] [end log extracts]
[2025-06-02 10:39:54] 2025-06-02 17:39:38,861 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 10:39:54] 2025-06-02 17:39:38,862 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 10:39:54] 2025-06-02 17:39:38,817 | INFO     | monitor loop #66: job 0:6677383838 is in state 'failed'
[2025-06-02 10:39:54] 2025-06-02 17:39:38,935 | WARNING  | exception caught: deque index out of range
[2025-06-02 10:39:54] 2025-06-02 17:39:39,056 | INFO     | 
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | job summary report
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | --------------------------------------------------
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | PanDA job id: 6677383838
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | task id: 45006595
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 10:37:20,624 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | pilot state: failed 
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | transexitcode: 65
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | exeerrorcode: 65
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | exitcode: 65
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | cpuconsumptiontime: 20 s
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | nevents: 0
[2025-06-02 10:39:54] 2025-06-02 17:39:39,057 | INFO     | neventsw: 0
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | pid: 973998
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | pgrp: 973998
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | corecount: 12
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | event service: False
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | sizes: {0: 2405174, 11: 2405174, 15: 2405408, 22: 2405436, 53: 2428697, 55: 2432932, 56: 2433088, 183: 2433230}
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | --------------------------------------------------
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | 
[2025-06-02 10:39:54] 2025-06-02 17:39:39,058 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 10:39:54] 2025-06-02 17:39:39,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 10:39:54] 2025-06-02 17:39:39,158 | INFO     | job 6677383838 has completed (purged errors)
[2025-06-02 10:39:54] 2025-06-02 17:39:39,159 | INFO     | overall cleanup function is called
[2025-06-02 10:39:54] 2025-06-02 17:39:40,205 | INFO     | --- collectZombieJob: --- 10, [973998]
[2025-06-02 10:39:54] 2025-06-02 17:39:40,205 | INFO     | zombie collector waiting for pid 973998
[2025-06-02 10:39:54] 2025-06-02 17:39:40,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 10:39:54] 2025-06-02 17:39:40,205 | INFO     | collected zombie processes
[2025-06-02 10:39:54] 2025-06-02 17:39:40,205 | INFO     | will attempt to kill all subprocesses of pid=973998
[2025-06-02 10:39:54] 2025-06-02 17:39:40,827 | INFO     | process IDs to be killed: [973998] (in reverse order)
[2025-06-02 10:39:54] 2025-06-02 17:39:41,059 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 10:39:54] 2025-06-02 17:39:41,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 10:39:54] 2025-06-02 17:39:41,124 | INFO     | did not find any defunct processes belonging to 973998
[2025-06-02 10:39:54] 2025-06-02 17:39:41,135 | INFO     | did not find any defunct processes belonging to 973998
[2025-06-02 10:39:54] 2025-06-02 17:39:41,136 | INFO     | ready for new job
[2025-06-02 10:39:54] 2025-06-02 17:39:41,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 10:39:54] 2025-06-02 17:39:41,138 | INFO     | **************************************
[2025-06-02 10:39:54] 2025-06-02 17:39:41,138 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 10:39:54] 2025-06-02 17:39:41,138 | INFO     | **************************************
[2025-06-02 10:39:54] 2025-06-02 17:39:41,138 | INFO     | 
[2025-06-02 10:39:54] 2025-06-02 17:39:41,168 | INFO     | architecture information:
[2025-06-02 10:39:54] 2025-06-02 17:39:41,177 | INFO     | executing command: cat /etc/os-release
[2025-06-02 10:39:54] 2025-06-02 17:39:41,251 | INFO     | cat /etc/os-release:
[2025-06-02 10:39:54] NAME="CentOS Linux"
[2025-06-02 10:39:54] VERSION="7 (Core)"
[2025-06-02 10:39:54] ID="centos"
[2025-06-02 10:39:54] ID_LIKE="rhel fedora"
[2025-06-02 10:39:54] VERSION_ID="7"
[2025-06-02 10:39:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 10:39:54] ANSI_COLOR="0;31"
[2025-06-02 10:39:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 10:39:54] HOME_URL="https://www.centos.org/"
[2025-06-02 10:39:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 10:39:54] 
[2025-06-02 10:39:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 10:39:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 10:39:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 10:39:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 10:39:54] 
[2025-06-02 10:39:54] 2025-06-02 17:39:41,252 | INFO     | **************************************
[2025-06-02 10:39:54] 2025-06-02 17:39:41,755 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 10:39:54] 2025-06-02 17:39:41,875 | INFO     | sufficient remaining disk space (2002214977536 B)
[2025-06-02 10:39:54] 2025-06-02 17:39:41,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 10:39:54] 2025-06-02 17:39:41,875 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 10:39:54] 2025-06-02 17:39:41,875 | INFO     | update_server=False
[2025-06-02 10:39:54] 2025-06-02 17:39:41,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 10:39:54] 2025-06-02 17:39:41,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 10:39:54] 2025-06-02 17:39:41,878 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 10:39:54] 2025-06-02 17:39:41,878 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 10:39:54] 2025-06-02 17:39:41,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 10:39:54] 2025-06-02 17:39:41,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 10:39:54] 2025-06-02 17:39:41,947 | INFO     | all data control threads have been joined
[2025-06-02 10:39:54] 2025-06-02 17:39:42,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:39:54] 2025-06-02 17:39:42,447 | INFO     | aborting loop
[2025-06-02 10:39:54] 2025-06-02 17:39:42,642 | INFO     | all job control threads have been joined
[2025-06-02 10:39:54] 2025-06-02 17:39:42,881 | INFO     | [job] retrieve thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:42,933 | INFO     | all payload control threads have been joined
[2025-06-02 10:39:54] 2025-06-02 17:39:42,953 | INFO     | [data] control thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,323 | INFO     | [job] validate thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,326 | INFO     | [payload] failed_post thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,380 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,453 | INFO     | [job] job monitor thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,500 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,514 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,653 | INFO     | [job] control thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 10:39:54] 2025-06-02 17:39:43,884 | INFO     | [data] copytool_out thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:43,939 | INFO     | [payload] control thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:44,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:44,103 | INFO     | [data] copytool_in thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:44,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 10:39:54] 2025-06-02 17:39:44,274 | INFO     | [payload] validate_post thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:45,114 | INFO     | [job] queue monitor thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:47,723 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 10:39:54] 2025-06-02 17:39:48,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710870378304)>', '<ExcThread(monitor, started 140709923362560)>']
[2025-06-02 10:39:54] 2025-06-02 17:39:48,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 10:39:54] 2025-06-02 17:39:48,920 | INFO     | [monitor] control thread has ended
[2025-06-02 10:39:54] 2025-06-02 17:39:53,937 | INFO     | all workflow threads have been joined
[2025-06-02 10:39:54] 2025-06-02 17:39:53,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 10:39:54] 2025-06-02 17:39:53,937 | INFO     | traces error code: 0
[2025-06-02 10:39:54] 2025-06-02 17:39:53,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 10:39:54] 2025-06-02 17:39:54,188 [wrapper] ==== pilot stdout END ====
[2025-06-02 10:39:54] 2025-06-02 17:39:54,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 10:39:54] 2025-06-02 17:39:54,290 [wrapper] pilotpid: 961804
[2025-06-02 10:39:54] 2025-06-02 17:39:54,331 [wrapper] Pilot exit status: 0
[2025-06-02 10:39:54] 2025-06-02 17:39:54,472 [wrapper] pandaids: 6677383838
[2025-06-02 10:39:54] 2025-06-02 17:39:54,545 [wrapper] cleanup supervisor_pilot  961810 961805
[2025-06-02 10:39:54] 2025-06-02 17:39:54,547 [wrapper] Test setup, not cleaning
[2025-06-02 10:39:54] 2025-06-02 17:39:54,550 [wrapper] apfmon messages muted
[2025-06-02 10:39:54] 2025-06-02 17:39:54,552 [wrapper] ==== wrapper stdout END ====
[2025-06-02 10:39:54] 2025-06-02 17:39:54,554 [wrapper] ==== wrapper stderr END ====
[2025-06-02 10:39:54]  *** Error codes and diagnostics ***
[2025-06-02 10:39:54]     "exeErrorCode": 65,
[2025-06-02 10:39:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:39:54]     "pilotErrorCode": 1305,
[2025-06-02 10:39:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 10:39:54]  *** Listing of results directory ***
[2025-06-02 10:39:54] total 214144
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc    495897 Jun  2 09:11 pilot3.tar.gz
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc      5111 Jun  2 09:28 queuedata.json
[2025-06-02 10:39:54] -rwx------. 1 boinc boinc     37140 Jun  2 09:30 runpilot2-wrapper.sh
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc       100 Jun  2 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 10:39:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 10:35 run_atlas
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc       105 Jun  2 10:35 job.xml
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc      6597 Jun  2 10:35 init_data.xml
[2025-06-02 10:39:54] -rw-r--r--. 2 boinc boinc 215250767 Jun  2 10:35 EVNT.45006593._000151.pool.root.1
[2025-06-02 10:39:54] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:35 start_atlas.sh
[2025-06-02 10:39:54] drwxrwx--x. 2 boinc boinc      4096 Jun  2 10:35 shared
[2025-06-02 10:39:54] -rw-r--r--. 2 boinc boinc    508875 Jun  2 10:35 input.tar.gz
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc         0 Jun  2 10:35 boinc_lockfile
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc      2521 Jun  2 10:35 pandaJob.out
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc    988298 Jun  2 10:36 agis_schedconf.cvmfs.json
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc   1603667 Jun  2 10:36 agis_ddmendpoints.agis.ALL.json
[2025-06-02 10:39:54] drwx------. 4 boinc boinc      4096 Jun  2 10:36 pilot3
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc       525 Jun  2 10:37 boinc_task_state.xml
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc       952 Jun  2 10:37 memory_monitor_summary.json
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc     20830 Jun  2 10:37 log.45006595._003775.job.log.tgz.1
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc        95 Jun  2 10:39 pilot_heartbeat.json
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc      8348 Jun  2 10:39 heartbeat.json
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc      8192 Jun  2 10:39 boinc_mmap_file
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc        23 Jun  2 10:39 wrapper_checkpoint.txt
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc      4475 Jun  2 10:39 pilotlog.txt
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc     77062 Jun  2 10:39 log.45006595._003775.job.log.1
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc       188 Jun  2 10:39 output.list
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc       620 Jun  2 10:39 runtime_log
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc    112640 Jun  2 10:39 result.tar.gz
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc      8484 Jun  2 10:39 runtime_log.err
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc       644 Jun  2 10:39 LlaLDmkENg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlPfKDm3t6Ufm.diag
[2025-06-02 10:39:54] -rw-r--r--. 1 boinc boinc     21124 Jun  2 10:39 stderr.txt
[2025-06-02 10:39:54] No HITS result produced
[2025-06-02 10:39:54]  *** Contents of shared directory: ***
[2025-06-02 10:39:54] total 210840
[2025-06-02 10:39:54] -rw-r--r--. 2 boinc boinc 215250767 Jun  2 10:35 ATLAS.root_0
[2025-06-02 10:39:54] -rw-r--r--. 2 boinc boinc     15093 Jun  2 10:35 start_atlas.sh
[2025-06-02 10:39:54] -rw-r--r--. 2 boinc boinc    508875 Jun  2 10:35 input.tar.gz
[2025-06-02 10:39:54] -rw-------. 1 boinc boinc    112640 Jun  2 10:39 result.tar.gz
10:39:56 (956232): run_atlas exited; CPU time 27.310554
10:39:56 (956232): called boinc_finish(0)

</stderr_txt>
]]>

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