Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:27:16 (2501447): wrapper (7.7.26015): starting
13:27:16 (2501447): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 13:27:16] Arguments: --nthreads 8
[2025-06-02 13:27:16] Threads: 8
[2025-06-02 13:27:16] Checking for CVMFS
[2025-06-02 13:27:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 13:27:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 13:27:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 13:27:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 13:27:16] 2.12.6.0 7692 34725 207356 146714 2 523 40038994 40960001 20336 16776704 1 425588150 99.761 262915936 34658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 13:27:16] CVMFS is ok
[2025-06-02 13:27:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 13:27:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 13:27:16] Further information can be found at the LHC@home message board.
[2025-06-02 13:27:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 13:27:16] Checking for apptainer binary...
[2025-06-02 13:27:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 13:27:16] Running /usr/bin/apptainer --version
[2025-06-02 13:27:16] apptainer version 1.4.1-1.el9
[2025-06-02 13:27:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 13:27:17] c8-7-4.aglt2.org
[2025-06-02 13:27:17] apptainer works
[2025-06-02 13:27:17] Set ATHENA_PROC_NUMBER=8
[2025-06-02 13:27:17] Set ATHENA_CORE_NUMBER=8
[2025-06-02 13:27:17] Starting ATLAS job with PandaID=6666906408
[2025-06-02 13:27:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 14:30:47]  *** The last 200 lines of the pilot log: ***
[2025-06-02 14:30:47]  guid=090f82a7-cbc1-4b08-bcc9-a036e5638d7e
[2025-06-02 14:30:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-02 14:30:47]  is_altstaged=None
[2025-06-02 14:30:47]  is_tar=False
[2025-06-02 14:30:47]  lfn=log.44871837._065753.job.log.tgz.1
[2025-06-02 14:30:47]  mtime=0
[2025-06-02 14:30:47]  protocol_id=None
[2025-06-02 14:30:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 14:30:47]  replicas=None
[2025-06-02 14:30:47]  scope=mc23_13p6TeV
[2025-06-02 14:30:47]  status=None
[2025-06-02 14:30:47]  status_code=0
[2025-06-02 14:30:47]  storage_token=
[2025-06-02 14:30:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666906408/log.44871837._065753.job.log.tgz.1
[2025-06-02 14:30:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/67/log.44871837._065753.job.log.tgz.1
[2025-06-02 14:30:47]  workdir=None
[2025-06-02 14:30:47] ]
[2025-06-02 14:30:47] 2025-06-02 18:30:21,499 | INFO     | transferring file log.44871837._065753.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666906408/log.44871837._065753.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-02 14:30:47] 2025-06-02 18:30:21,499 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666906408/log.44871837._065753.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._065753.job
[2025-06-02 14:30:47] 2025-06-02 18:30:21,520 | INFO     | adding to output.list: log.44871837._065753.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/67/log.44871837._065753.job.log.tg
[2025-06-02 14:30:47] 2025-06-02 18:30:21,521 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 14:30:47] 2025-06-02 18:30:21,521 | INFO     | summary of transferred files:
[2025-06-02 14:30:47] 2025-06-02 18:30:21,521 | INFO     |  -- lfn=log.44871837._065753.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 14:30:47] 2025-06-02 18:30:21,521 | INFO     | stage-out finished correctly
[2025-06-02 14:30:47] 2025-06-02 18:30:21,580 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 14:30:47] 2025-06-02 18:30:21,633 | INFO     | job 6666906408 has state=finished
[2025-06-02 14:30:47] 2025-06-02 18:30:21,634 | INFO     | preparing for final server update for job 6666906408 in state='finished'
[2025-06-02 14:30:47] 2025-06-02 18:30:21,634 | INFO     | this job has now completed (state=finished)
[2025-06-02 14:30:47] 2025-06-02 18:30:21,634 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 14:30:47] 2025-06-02 18:30:21,634 | INFO     | log transfer has been attempted: DONE
[2025-06-02 14:30:47] 2025-06-02 18:30:21,635 | INFO     | job 6666906408 has finished - writing final server update
[2025-06-02 14:30:47] 2025-06-02 18:30:21,635 | INFO     | total number of processed events: 400 (read)
[2025-06-02 14:30:47] 2025-06-02 18:30:21,653 | INFO     | executing command: lscpu
[2025-06-02 14:30:47] 2025-06-02 18:30:21,728 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 14:30:47] 2025-06-02 18:30:22,766 | INFO     | monitor loop #274: job 0:6666906408 is in state 'finished'
[2025-06-02 14:30:47] 2025-06-02 18:30:22,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 14:30:47] 2025-06-02 18:30:25,269 | INFO     | monitor loop #275: job 0:6666906408 is in state 'finished'
[2025-06-02 14:30:47] 2025-06-02 18:30:25,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 14:30:47] 2025-06-02 18:30:26,051 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-02 14:30:47] 2025-06-02 18:30:26,052 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666906408/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 14:30:47] 2025-06-02 18:30:26,052 | INFO     | extracted standard info from prmon json
[2025-06-02 14:30:47] 2025-06-02 18:30:26,053 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 14:30:47] 2025-06-02 18:30:26,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 14:30:47] 2025-06-02 18:30:26,053 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 14:30:47] 2025-06-02 18:30:26,053 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 14:30:47] 2025-06-02 18:30:26,054 | INFO     | fitting pss+swap vs Time
[2025-06-02 14:30:47] 2025-06-02 18:30:26,054 | INFO     | sum of square deviations: 51573060.0
[2025-06-02 14:30:47] 2025-06-02 18:30:26,054 | INFO     | sum of deviations: -1665064906.0000002
[2025-06-02 14:30:47] 2025-06-02 18:30:26,054 | INFO     | mean x: 1748887226.0
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | mean y: 2527679.963636364
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | -- intersect: 56466323789.10068
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | intersect: 56466323789.10068
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | chi2: 0.00953867289860794
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | -- intersect: 56466323789.10068
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | current memory leak: -32.29 B/s (using 55 data points, chi2=0.01)
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | ..............................
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . Timing measurements:
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . get job = 0 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . initial setup = 2 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . payload setup = 6 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . stage-in = 0 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . payload execution = 3748 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . stage-out = 0 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | . log creation = 0 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,055 | INFO     | ..............................
[2025-06-02 14:30:47] 2025-06-02 18:30:26,613 | INFO     | 
[2025-06-02 14:30:47] 2025-06-02 18:30:26,613 | INFO     | job summary report
[2025-06-02 14:30:47] 2025-06-02 18:30:26,613 | INFO     | --------------------------------------------------
[2025-06-02 14:30:47] 2025-06-02 18:30:26,613 | INFO     | PanDA job id: 6666906408
[2025-06-02 14:30:47] 2025-06-02 18:30:26,613 | INFO     | task id: 44871837
[2025-06-02 14:30:47] 2025-06-02 18:30:26,613 | INFO     | errors: (none)
[2025-06-02 14:30:47] 2025-06-02 18:30:26,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | pilot state: finished 
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | transexitcode: 0
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | exeerrorcode: 0
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | exeerrordiag: 
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | exitcode: 0
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | exitmsg: OK
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | cpuconsumptiontime: 26810 s
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | nevents: 400
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | neventsw: 0
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | pid: 2545218
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | pgrp: 2545218
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | corecount: 8
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | event service: False
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | sizes: {0: 2405234, 4: 2405440, 11: 2405468, 3758: 2431128, 3759: 2440125, 3763: 2440239}
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | --------------------------------------------------
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | 
[2025-06-02 14:30:47] 2025-06-02 18:30:26,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-02 14:30:47] 2025-06-02 18:30:26,639 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 14:30:47] 2025-06-02 18:30:26,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,641 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 14:30:47] 2025-06-02 18:30:26,641 | INFO     | job 6666906408 has completed (purged errors)
[2025-06-02 14:30:47] 2025-06-02 18:30:26,641 | INFO     | overall cleanup function is called
[2025-06-02 14:30:47] 2025-06-02 18:30:27,649 | INFO     | --- collectZombieJob: --- 10, [2545218]
[2025-06-02 14:30:47] 2025-06-02 18:30:27,649 | INFO     | zombie collector waiting for pid 2545218
[2025-06-02 14:30:47] 2025-06-02 18:30:27,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 14:30:47] 2025-06-02 18:30:27,649 | INFO     | collected zombie processes
[2025-06-02 14:30:47] 2025-06-02 18:30:27,649 | INFO     | will attempt to kill all subprocesses of pid=2545218
[2025-06-02 14:30:47] 2025-06-02 18:30:28,191 | INFO     | process IDs to be killed: [2545218] (in reverse order)
[2025-06-02 14:30:47] 2025-06-02 18:30:28,349 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 14:30:47] 2025-06-02 18:30:28,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 14:30:47] 2025-06-02 18:30:28,376 | INFO     | did not find any defunct processes belonging to 2545218
[2025-06-02 14:30:47] 2025-06-02 18:30:28,399 | INFO     | did not find any defunct processes belonging to 2545218
[2025-06-02 14:30:47] 2025-06-02 18:30:28,400 | INFO     | ready for new job
[2025-06-02 14:30:47] 2025-06-02 18:30:28,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 14:30:47] 2025-06-02 18:30:28,401 | INFO     | **************************************
[2025-06-02 14:30:47] 2025-06-02 18:30:28,401 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 14:30:47] 2025-06-02 18:30:28,401 | INFO     | **************************************
[2025-06-02 14:30:47] 2025-06-02 18:30:28,401 | INFO     | 
[2025-06-02 14:30:47] 2025-06-02 18:30:28,419 | INFO     | architecture information:
[2025-06-02 14:30:47] 2025-06-02 18:30:28,419 | INFO     | executing command: cat /etc/os-release
[2025-06-02 14:30:47] 2025-06-02 18:30:28,435 | INFO     | cat /etc/os-release:
[2025-06-02 14:30:47] NAME="CentOS Linux"
[2025-06-02 14:30:47] VERSION="7 (Core)"
[2025-06-02 14:30:47] ID="centos"
[2025-06-02 14:30:47] ID_LIKE="rhel fedora"
[2025-06-02 14:30:47] VERSION_ID="7"
[2025-06-02 14:30:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 14:30:47] ANSI_COLOR="0;31"
[2025-06-02 14:30:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 14:30:47] HOME_URL="https://www.centos.org/"
[2025-06-02 14:30:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 14:30:47] 
[2025-06-02 14:30:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 14:30:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 14:30:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 14:30:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 14:30:47] 
[2025-06-02 14:30:47] 2025-06-02 18:30:28,435 | INFO     | **************************************
[2025-06-02 14:30:47] 2025-06-02 18:30:28,938 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-02 14:30:47] 2025-06-02 18:30:28,958 | INFO     | sufficient remaining disk space (172088098816 B)
[2025-06-02 14:30:47] 2025-06-02 18:30:28,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 14:30:47] 2025-06-02 18:30:28,958 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 14:30:47] 2025-06-02 18:30:28,958 | INFO     | update_server=False
[2025-06-02 14:30:47] 2025-06-02 18:30:28,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 14:30:47] 2025-06-02 18:30:28,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 14:30:47] 2025-06-02 18:30:28,959 | INFO     | aborting loop
[2025-06-02 14:30:47] 2025-06-02 18:30:28,977 | INFO     | all data control threads have been joined
[2025-06-02 14:30:47] 2025-06-02 18:30:29,079 | INFO     | all job control threads have been joined
[2025-06-02 14:30:47] 2025-06-02 18:30:29,579 | INFO     | all payload control threads have been joined
[2025-06-02 14:30:47] 2025-06-02 18:30:29,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 14:30:47] 2025-06-02 18:30:29,963 | INFO     | [job] retrieve thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:29,964 | INFO     | [job] job monitor thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:29,982 | INFO     | [data] control thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,007 | INFO     | [payload] validate_post thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,035 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,048 | INFO     | [data] copytool_in thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,077 | INFO     | [job] validate thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,084 | INFO     | [job] control thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,293 | INFO     | PID=2511013 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-02 14:30:47] 2025-06-02 18:30:30,293 | INFO     | .. there are 19 such processes running
[2025-06-02 14:30:47] 2025-06-02 18:30:30,293 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 14:30:47] 2025-06-02 18:30:30,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 14:30:47] 2025-06-02 18:30:30,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 14:30:47] 2025-06-02 18:30:30,308 | INFO     | [payload] failed_post thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,585 | INFO     | [payload] control thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,685 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:30,952 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:31,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 14:30:47] 2025-06-02 18:30:31,603 | INFO     | [data] copytool_out thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:32,134 | INFO     | [job] queue monitor thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:32,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 14:30:47] 2025-06-02 18:30:36,155 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:39,874 | INFO     | job.realtimelogging is not enabled
[2025-06-02 14:30:47] 2025-06-02 18:30:40,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 14:30:47] 2025-06-02 18:30:41,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187311286080)>', '<ExcThread(monitor, started 140186952378112)>']
[2025-06-02 14:30:47] 2025-06-02 18:30:42,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 14:30:47] 2025-06-02 18:30:42,361 | INFO     | [monitor] control thread has ended
[2025-06-02 14:30:47] 2025-06-02 18:30:46,867 | INFO     | all workflow threads have been joined
[2025-06-02 14:30:47] 2025-06-02 18:30:46,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 14:30:47] 2025-06-02 18:30:46,868 | INFO     | traces error code: 0
[2025-06-02 14:30:47] 2025-06-02 18:30:46,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 14:30:47] 2025-06-02 18:30:47,000 [wrapper] ==== pilot stdout END ====
[2025-06-02 14:30:47] 2025-06-02 18:30:47,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 14:30:47] 2025-06-02 18:30:47,005 [wrapper] pilotpid: 2511013
[2025-06-02 14:30:47] 2025-06-02 18:30:47,007 [wrapper] Pilot exit status: 0
[2025-06-02 14:30:47] 2025-06-02 18:30:47,035 [wrapper] pandaids: 6666906408
[2025-06-02 14:30:47] 2025-06-02 18:30:47,135 [wrapper] cleanup supervisor_pilot  357963 2511014
[2025-06-02 14:30:47] 2025-06-02 18:30:47,138 [wrapper] Test setup, not cleaning
[2025-06-02 14:30:47] 2025-06-02 18:30:47,140 [wrapper] apfmon messages muted
[2025-06-02 14:30:47] 2025-06-02 18:30:47,143 [wrapper] ==== wrapper stdout END ====
[2025-06-02 14:30:47] 2025-06-02 18:30:47,145 [wrapper] ==== wrapper stderr END ====
[2025-06-02 14:30:47]  *** Error codes and diagnostics ***
[2025-06-02 14:30:47]     "exeErrorCode": 0,
[2025-06-02 14:30:47]     "exeErrorDiag": "",
[2025-06-02 14:30:47]     "pilotErrorCode": 0,
[2025-06-02 14:30:47]     "pilotErrorDiag": "",
[2025-06-02 14:30:47]  *** Listing of results directory ***
[2025-06-02 14:30:47] total 414952
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas    495897 May 27 05:27 pilot3.tar.gz
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas      5111 May 27 06:13 queuedata.json
[2025-06-02 14:30:47] -rwx------. 1 boincer umatlas     37140 May 27 06:17 runpilot2-wrapper.sh
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas       100 Jun  2 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 14:30:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 13:27 run_atlas
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas       105 Jun  2 13:27 job.xml
[2025-06-02 14:30:47] -rw-r--r--. 2 boincer umatlas 224436198 Jun  2 13:27 EVNT.44871834._002589.pool.root.1
[2025-06-02 14:30:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 13:27 start_atlas.sh
[2025-06-02 14:30:47] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 13:27 shared
[2025-06-02 14:30:47] -rw-r--r--. 2 boincer umatlas    508884 Jun  2 13:27 input.tar.gz
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas         0 Jun  2 13:27 boinc_lockfile
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas      2559 Jun  2 13:27 pandaJob.out
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas    988298 Jun  2 13:27 agis_schedconf.cvmfs.json
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas   1603667 Jun  2 13:27 agis_ddmendpoints.agis.ALL.json
[2025-06-02 14:30:47] drwx------. 4 boincer umatlas      4096 Jun  2 13:27 pilot3
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas      7160 Jun  2 14:21 init_data.xml
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas        95 Jun  2 14:29 pilot_heartbeat.json
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas 195259897 Jun  2 14:29 HITS.44871837._065753.pool.root.1
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas       529 Jun  2 14:30 boinc_task_state.xml
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas      1055 Jun  2 14:30 memory_monitor_summary.json
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas    306624 Jun  2 14:30 log.44871837._065753.job.log.tgz.1
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas      7706 Jun  2 14:30 heartbeat.json
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 14:30 boinc_mmap_file
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas        27 Jun  2 14:30 wrapper_checkpoint.txt
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas      4822 Jun  2 14:30 pilotlog.txt
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas    384460 Jun  2 14:30 log.44871837._065753.job.log.1
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas       357 Jun  2 14:30 output.list
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas       620 Jun  2 14:30 runtime_log
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas    706560 Jun  2 14:30 result.tar.gz
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas      8649 Jun  2 14:30 runtime_log.err
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas       654 Jun  2 14:30 rneMDmkY6d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma6YKDmSPGhan.diag
[2025-06-02 14:30:47] -rw-r--r--. 1 boincer umatlas     21332 Jun  2 14:30 stderr.txt
[2025-06-02 14:30:47] HITS file was successfully produced:
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas 195259897 Jun  2 14:29 shared/HITS.pool.root.1
[2025-06-02 14:30:47]  *** Contents of shared directory: ***
[2025-06-02 14:30:47] total 411076
[2025-06-02 14:30:47] -rw-r--r--. 2 boincer umatlas 224436198 Jun  2 13:27 ATLAS.root_0
[2025-06-02 14:30:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 13:27 start_atlas.sh
[2025-06-02 14:30:47] -rw-r--r--. 2 boincer umatlas    508884 Jun  2 13:27 input.tar.gz
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas 195259897 Jun  2 14:29 HITS.pool.root.1
[2025-06-02 14:30:47] -rw-------. 1 boincer umatlas    706560 Jun  2 14:30 result.tar.gz
14:30:48 (2501447): run_atlas exited; CPU time 26876.701324
14:30:48 (2501447): called boinc_finish(0)

</stderr_txt>
]]>

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