Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:36 (17801): wrapper (7.7.26015): starting
19:20:36 (17801): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 19:20:36] Arguments: --nthreads 8
[2025-06-02 19:20:36] Threads: 8
[2025-06-02 19:20:36] Checking for CVMFS
[2025-06-02 19:20:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 19:20:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 19:20:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 19:20:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 19:20:39] 2.11.2.0 29611 30608 96428 146713 3 170 25059907 25165825 4594 130560 0 15120672 99.829 17508129 2159 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 19:20:39] CVMFS is ok
[2025-06-02 19:20:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 19:20:39] Checking for apptainer binary...
[2025-06-02 19:20:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 19:20:39] Running /usr/bin/apptainer --version
[2025-06-02 19:20:39] apptainer version 1.3.2-1.el7
[2025-06-02 19:20:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 19:20:46] cg-vwn406.simple-grid.lan
[2025-06-02 19:20:46] apptainer works
[2025-06-02 19:20:46] Set ATHENA_PROC_NUMBER=8
[2025-06-02 19:20:46] Set ATHENA_CORE_NUMBER=8
[2025-06-02 19:20:46] Starting ATLAS job with PandaID=6677377594
[2025-06-02 19:20:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:14:02]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:14:02] 2025-06-02 21:13:48,368 | INFO     | extracted standard info from prmon json
[2025-06-02 23:14:02] 2025-06-02 21:13:48,368 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 23:14:02] 2025-06-02 21:13:48,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:14:02] 2025-06-02 21:13:48,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:14:02] 2025-06-02 21:13:48,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:14:02] 2025-06-02 21:13:48,374 | INFO     | fitting pss+swap vs Time
[2025-06-02 23:14:02] 2025-06-02 21:13:48,375 | INFO     | sum of square deviations: 3212467674.5
[2025-06-02 23:14:02] 2025-06-02 21:13:48,376 | INFO     | sum of deviations: 89094642540.5
[2025-06-02 23:14:02] 2025-06-02 21:13:48,377 | INFO     | mean x: 1748892135.5
[2025-06-02 23:14:02] 2025-06-02 21:13:48,377 | INFO     | mean y: 2437482.5
[2025-06-02 23:14:02] 2025-06-02 21:13:48,377 | INFO     | -- intersect: -48501371875.991394
[2025-06-02 23:14:02] 2025-06-02 21:13:48,377 | INFO     | intersect: -48501371875.991394
[2025-06-02 23:14:02] 2025-06-02 21:13:48,377 | INFO     | chi2: 7.633595477409817
[2025-06-02 23:14:02] 2025-06-02 21:13:48,378 | INFO     | sum of square deviations: 2996454322.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,380 | INFO     | sum of deviations: 87005209082.99998
[2025-06-02 23:14:02] 2025-06-02 21:13:48,380 | INFO     | mean x: 1748891983.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,380 | INFO     | mean y: 2436007.352112676
[2025-06-02 23:14:02] 2025-06-02 21:13:48,381 | INFO     | -- intersect: -50778485806.578835
[2025-06-02 23:14:02] 2025-06-02 21:13:48,381 | INFO     | intersect: -50778485806.578835
[2025-06-02 23:14:02] 2025-06-02 21:13:48,381 | INFO     | chi2: 7.651231215126397
[2025-06-02 23:14:02] 2025-06-02 21:13:48,381 | INFO     | current chi2=7.651231215126397 (change=-0.23102793131715327 %)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,381 | INFO     | right removable region: 212
[2025-06-02 23:14:02] 2025-06-02 21:13:48,382 | INFO     | sum of square deviations: 2996454322.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,383 | INFO     | sum of deviations: 12769871882.000008
[2025-06-02 23:14:02] 2025-06-02 21:13:48,384 | INFO     | mean x: 1748892288.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,384 | INFO     | mean y: 2491331.7699530516
[2025-06-02 23:14:02] 2025-06-02 21:13:48,384 | INFO     | -- intersect: -7450694351.458312
[2025-06-02 23:14:02] 2025-06-02 21:13:48,384 | INFO     | intersect: -7450694351.458312
[2025-06-02 23:14:02] 2025-06-02 21:13:48,384 | INFO     | chi2: 2.422114382754961
[2025-06-02 23:14:02] 2025-06-02 21:13:48,384 | INFO     | current chi2=2.422114382754961 (change=68.27033355483991 %)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,385 | INFO     | sum of square deviations: 2790348132.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,387 | INFO     | sum of deviations: -35599532168.00001
[2025-06-02 23:14:02] 2025-06-02 21:13:48,387 | INFO     | mean x: 1748892440.5
[2025-06-02 23:14:02] 2025-06-02 21:13:48,387 | INFO     | mean y: 2526967.721153846
[2025-06-02 23:14:02] 2025-06-02 21:13:48,387 | INFO     | -- intersect: 22315066388.860233
[2025-06-02 23:14:02] 2025-06-02 21:13:48,387 | INFO     | intersect: 22315066388.860233
[2025-06-02 23:14:02] 2025-06-02 21:13:48,388 | INFO     | chi2: 0.24642204113233035
[2025-06-02 23:14:02] 2025-06-02 21:13:48,388 | INFO     | current chi2=0.24642204113233035 (change=89.82616003245705 %)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,388 | INFO     | sum of square deviations: 2593916542.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,390 | INFO     | sum of deviations: -38721034843.000015
[2025-06-02 23:14:02] 2025-06-02 21:13:48,390 | INFO     | mean x: 1748892593.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,390 | INFO     | mean y: 2529324.8571428573
[2025-06-02 23:14:02] 2025-06-02 21:13:48,390 | INFO     | -- intersect: 26109356562.253143
[2025-06-02 23:14:02] 2025-06-02 21:13:48,390 | INFO     | intersect: 26109356562.253143
[2025-06-02 23:14:02] 2025-06-02 21:13:48,391 | INFO     | chi2: 0.19062023442651893
[2025-06-02 23:14:02] 2025-06-02 21:13:48,391 | INFO     | current chi2=0.19062023442651893 (change=22.644811498759342 %)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,391 | INFO     | left removable region: 30
[2025-06-02 23:14:02] 2025-06-02 21:13:48,391 | INFO     | sum of square deviations: 1869302025.5
[2025-06-02 23:14:02] 2025-06-02 21:13:48,392 | INFO     | sum of deviations: -18226759923.0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,393 | INFO     | mean x: 1748892867.5
[2025-06-02 23:14:02] 2025-06-02 21:13:48,393 | INFO     | mean y: 2512405.5604395606
[2025-06-02 23:14:02] 2025-06-02 21:13:48,393 | INFO     | -- intersect: 17055214425.953959
[2025-06-02 23:14:02] 2025-06-02 21:13:48,393 | INFO     | intersect: 17055214425.953959
[2025-06-02 23:14:02] 2025-06-02 21:13:48,393 | INFO     | chi2: 0.13797240884270515
[2025-06-02 23:14:02] 2025-06-02 21:13:48,393 | INFO     | -- intersect: 17055214425.953959
[2025-06-02 23:14:02] 2025-06-02 21:13:48,393 | INFO     | current memory leak: -9.75 B/s (using 182 data points, chi2=0.14)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,394 | INFO     | ..............................
[2025-06-02 23:14:02] 2025-06-02 21:13:48,394 | INFO     | . Timing measurements:
[2025-06-02 23:14:02] 2025-06-02 21:13:48,394 | INFO     | . get job = 0 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,394 | INFO     | . initial setup = 7 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,395 | INFO     | . payload setup = 148 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,395 | INFO     | . stage-in = 0 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,395 | INFO     | . payload execution = 13451 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,395 | INFO     | . stage-out = 2 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,395 | INFO     | . log creation = 0 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,395 | INFO     | ..............................
[2025-06-02 23:14:02] 2025-06-02 21:13:48,864 | INFO     | 
[2025-06-02 23:14:02] 2025-06-02 21:13:48,864 | INFO     | job summary report
[2025-06-02 23:14:02] 2025-06-02 21:13:48,864 | INFO     | --------------------------------------------------
[2025-06-02 23:14:02] 2025-06-02 21:13:48,864 | INFO     | PanDA job id: 6677377594
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | task id: 45006595
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | errors: (none)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | pilot state: finished 
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | transexitcode: 0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | exeerrorcode: 0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | exeerrordiag: 
[2025-06-02 23:14:02] 2025-06-02 21:13:48,865 | INFO     | exitcode: 0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | exitmsg: OK
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | cpuconsumptiontime: 48847 s
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | nevents: 400
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | neventsw: 0
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | pid: 32155
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | pgrp: 32155
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | corecount: 8
[2025-06-02 23:14:02] 2025-06-02 21:13:48,866 | INFO     | event service: False
[2025-06-02 23:14:02] 2025-06-02 21:13:48,867 | INFO     | sizes: {0: 2404344, 1: 2405029, 2: 2405228, 13: 2405228, 23: 2405284, 34: 2405312, 45: 2405468, 56: 2405496, 66: 2405524, 77: 2405552, 87: 2405814, 88: 2406122, 13
[2025-06-02 23:14:02] 2025-06-02 21:13:48,867 | INFO     | --------------------------------------------------
[2025-06-02 23:14:02] 2025-06-02 21:13:48,867 | INFO     | 
[2025-06-02 23:14:02] 2025-06-02 21:13:48,867 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-02 23:14:02] 2025-06-02 21:13:48,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:14:02] 2025-06-02 21:13:48,901 | INFO     | job 6677377594 has completed (purged errors)
[2025-06-02 23:14:02] 2025-06-02 21:13:48,901 | INFO     | overall cleanup function is called
[2025-06-02 23:14:02] 2025-06-02 21:13:49,909 | INFO     | --- collectZombieJob: --- 10, [32155]
[2025-06-02 23:14:02] 2025-06-02 21:13:49,910 | INFO     | zombie collector waiting for pid 32155
[2025-06-02 23:14:02] 2025-06-02 21:13:49,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:14:02] 2025-06-02 21:13:49,910 | INFO     | collected zombie processes
[2025-06-02 23:14:02] 2025-06-02 21:13:49,910 | INFO     | will attempt to kill all subprocesses of pid=32155
[2025-06-02 23:14:02] 2025-06-02 21:13:50,007 | INFO     | process IDs to be killed: [32155] (in reverse order)
[2025-06-02 23:14:02] 2025-06-02 21:13:50,085 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:14:02] 2025-06-02 21:13:50,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:14:02] 2025-06-02 21:13:50,089 | INFO     | did not find any defunct processes belonging to 32155
[2025-06-02 23:14:02] 2025-06-02 21:13:50,093 | INFO     | did not find any defunct processes belonging to 32155
[2025-06-02 23:14:02] 2025-06-02 21:13:50,093 | INFO     | ready for new job
[2025-06-02 23:14:02] 2025-06-02 21:13:50,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:14:02] 2025-06-02 21:13:50,095 | INFO     | **************************************
[2025-06-02 23:14:02] 2025-06-02 21:13:50,096 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:14:02] 2025-06-02 21:13:50,096 | INFO     | **************************************
[2025-06-02 23:14:02] 2025-06-02 21:13:50,096 | INFO     | 
[2025-06-02 23:14:02] 2025-06-02 21:13:50,096 | INFO     | pilot is running in a VM
[2025-06-02 23:14:02] 2025-06-02 21:13:50,096 | INFO     | architecture information:
[2025-06-02 23:14:02] 2025-06-02 21:13:50,097 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:14:02] 2025-06-02 21:13:50,120 | INFO     | cat /etc/os-release:
[2025-06-02 23:14:02] NAME="CentOS Linux"
[2025-06-02 23:14:02] VERSION="7 (Core)"
[2025-06-02 23:14:02] ID="centos"
[2025-06-02 23:14:02] ID_LIKE="rhel fedora"
[2025-06-02 23:14:02] VERSION_ID="7"
[2025-06-02 23:14:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:14:02] ANSI_COLOR="0;31"
[2025-06-02 23:14:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:14:02] HOME_URL="https://www.centos.org/"
[2025-06-02 23:14:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:14:02] 
[2025-06-02 23:14:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:14:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:14:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:14:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:14:02] 
[2025-06-02 23:14:02] 2025-06-02 21:13:50,121 | INFO     | **************************************
[2025-06-02 23:14:02] 2025-06-02 21:13:50,624 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-02 23:14:02] 2025-06-02 21:13:50,654 | INFO     | sufficient remaining disk space (496987275264 B)
[2025-06-02 23:14:02] 2025-06-02 21:13:50,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:14:02] 2025-06-02 21:13:50,655 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:14:02] 2025-06-02 21:13:50,655 | INFO     | update_server=False
[2025-06-02 23:14:02] 2025-06-02 21:13:50,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:14:02] 2025-06-02 21:13:50,656 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 23:14:02] 2025-06-02 21:13:50,656 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:14:02] 2025-06-02 21:13:50,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:14:02] 2025-06-02 21:13:50,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:14:02] 2025-06-02 21:13:50,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:14:02] 2025-06-02 21:13:50,657 | INFO     | aborting loop
[2025-06-02 23:14:02] 2025-06-02 21:13:50,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:14:02] 2025-06-02 21:13:50,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:14:02] 2025-06-02 21:13:51,255 | INFO     | all data control threads have been joined
[2025-06-02 23:14:02] 2025-06-02 21:13:51,535 | INFO     | all job control threads have been joined
[2025-06-02 23:14:02] 2025-06-02 21:13:51,662 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:51,663 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:51,714 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:51,808 | INFO     | all payload control threads have been joined
[2025-06-02 23:14:02] 2025-06-02 21:13:52,038 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,263 | INFO     | [data] control thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,298 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,457 | INFO     | [job] validate thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,542 | INFO     | [job] control thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,623 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,665 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,769 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,774 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,783 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:52,814 | INFO     | [payload] control thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:53,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:14:02] 2025-06-02 21:13:54,545 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:54,665 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:14:02] 2025-06-02 21:13:56,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139936974817088)>', '<ExcThread(monitor, started 139936401450752)>']
[2025-06-02 23:14:02] 2025-06-02 21:13:57,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:14:02] 2025-06-02 21:13:57,695 | INFO     | [monitor] control thread has ended
[2025-06-02 23:14:02] 2025-06-02 21:14:01,719 | INFO     | all workflow threads have been joined
[2025-06-02 23:14:02] 2025-06-02 21:14:01,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:14:02] 2025-06-02 21:14:01,720 | INFO     | traces error code: 0
[2025-06-02 23:14:02] 2025-06-02 21:14:01,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:14:02] 2025-06-02 21:14:01,987 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:14:02] 2025-06-02 21:14:02,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:14:02] 2025-06-02 21:14:02,096 [wrapper] pilotpid: 21516
[2025-06-02 23:14:02] 2025-06-02 21:14:02,142 [wrapper] Pilot exit status: 0
[2025-06-02 23:14:02] 2025-06-02 21:14:02,183 [wrapper] pandaids: 6677377594
[2025-06-02 23:14:02] 2025-06-02 21:14:02,222 [wrapper] cleanup supervisor_pilot 24943 21517
[2025-06-02 23:14:02] 2025-06-02 21:14:02,281 [wrapper] Test setup, not cleaning
[2025-06-02 23:14:02] 2025-06-02 21:14:02,285 [wrapper] apfmon messages muted
[2025-06-02 23:14:02] 2025-06-02 21:14:02,306 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:14:02] 2025-06-02 21:14:02,362 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:14:02]  *** Error codes and diagnostics ***
[2025-06-02 23:14:02]     "exeErrorCode": 0,
[2025-06-02 23:14:02]     "exeErrorDiag": "",
[2025-06-02 23:14:02]     "pilotErrorCode": 0,
[2025-06-02 23:14:02]     "pilotErrorDiag": "",
[2025-06-02 23:14:02]  *** Listing of results directory ***
[2025-06-02 23:14:02] total 391096
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-02 23:14:02] -rwx------. 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc       100 Jun  2 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:14:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 19:20 run_atlas
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc       105 Jun  2 19:20 job.xml
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc      6392 Jun  2 19:20 init_data.xml
[2025-06-02 23:14:02] -rw-r--r--. 2 boinc boinc 215219922 Jun  2 19:20 EVNT.45006593._000027.pool.root.1
[2025-06-02 23:14:02] drwxrwx--x. 2 boinc boinc        68 Jun  2 19:20 shared
[2025-06-02 23:14:02] -rw-r--r--. 2 boinc boinc    508878 Jun  2 19:20 input.tar.gz
[2025-06-02 23:14:02] -rw-r--r--. 2 boinc boinc     15093 Jun  2 19:20 start_atlas.sh
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc         0 Jun  2 19:20 boinc_lockfile
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc      2519 Jun  2 19:20 pandaJob.out
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc    988298 Jun  2 19:23 agis_schedconf.cvmfs.json
[2025-06-02 23:14:02] drwx------. 4 boinc boinc      4096 Jun  2 19:24 pilot3
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc 178322919 Jun  2 23:12 HITS.45006595._000666.pool.root.1
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc       531 Jun  2 23:13 boinc_task_state.xml
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc        95 Jun  2 23:13 pilot_heartbeat.json
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:13 boinc_mmap_file
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc      1015 Jun  2 23:13 memory_monitor_summary.json
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc        28 Jun  2 23:13 wrapper_checkpoint.txt
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc   1603667 Jun  2 23:13 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc    383723 Jun  2 23:13 log.45006595._000666.job.log.tgz.1
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc      7682 Jun  2 23:13 heartbeat.json
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc      4539 Jun  2 23:14 pilotlog.txt
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc   1176240 Jun  2 23:14 log.45006595._000666.job.log.1
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc       357 Jun  2 23:14 output.list
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:14 runtime_log
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc   1576960 Jun  2 23:14 result.tar.gz
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc      8659 Jun  2 23:14 runtime_log.err
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc       657 Jun  2 23:14 22OLDmoaMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ0eKDmDQukTm.diag
[2025-06-02 23:14:02] -rw-r--r--. 1 boinc boinc     20517 Jun  2 23:14 stderr.txt
[2025-06-02 23:14:02] HITS file was successfully produced:
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc 178322919 Jun  2 23:12 shared/HITS.pool.root.1
[2025-06-02 23:14:02]  *** Contents of shared directory: ***
[2025-06-02 23:14:02] total 386376
[2025-06-02 23:14:02] -rw-r--r--. 2 boinc boinc 215219922 Jun  2 19:20 ATLAS.root_0
[2025-06-02 23:14:02] -rw-r--r--. 2 boinc boinc    508878 Jun  2 19:20 input.tar.gz
[2025-06-02 23:14:02] -rw-r--r--. 2 boinc boinc     15093 Jun  2 19:20 start_atlas.sh
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc 178322919 Jun  2 23:12 HITS.pool.root.1
[2025-06-02 23:14:02] -rw-------. 1 boinc boinc   1576960 Jun  2 23:14 result.tar.gz
23:14:03 (17801): run_atlas exited; CPU time 49016.577490
23:14:03 (17801): called boinc_finish(0)

</stderr_txt>
]]>

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