Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:37:36 (15737): wrapper (7.7.26015): starting
00:37:36 (15737): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:37:36] Arguments: --nthreads 8
[2025-06-03 00:37:36] Threads: 8
[2025-06-03 00:37:36] Checking for CVMFS
[2025-06-03 00:37:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:37:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:37:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:37:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:37:37] 2.11.2.0 25320 30925 98496 146718 3 155 18019390 25165825 4097 130560 0 15964853 99.803 17800290 2191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:37:37] CVMFS is ok
[2025-06-03 00:37:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:37:37] Checking for apptainer binary...
[2025-06-03 00:37:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:37:37] Running /usr/bin/apptainer --version
[2025-06-03 00:37:37] apptainer version 1.3.2-1.el7
[2025-06-03 00:37:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 00:37:39] cg-vwn449.simple-grid.lan
[2025-06-03 00:37:39] apptainer works
[2025-06-03 00:37:39] Set ATHENA_PROC_NUMBER=8
[2025-06-03 00:37:39] Set ATHENA_CORE_NUMBER=8
[2025-06-03 00:37:39] Starting ATLAS job with PandaID=6677383247
[2025-06-03 00:37:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:29:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:29:42] 2025-06-03 02:16:30,786 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6677383247/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:29:42] 2025-06-03 02:16:30,787 | INFO     | extracted standard info from prmon json
[2025-06-03 04:29:42] 2025-06-03 02:16:30,787 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 04:29:42] 2025-06-03 02:16:30,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:29:42] 2025-06-03 02:16:30,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:29:42] 2025-06-03 02:16:30,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:29:42] 2025-06-03 02:16:30,792 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:29:42] 2025-06-03 02:16:30,793 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,795 | INFO     | sum of deviations: 2197704217.9999924
[2025-06-03 04:29:42] 2025-06-03 02:16:30,795 | INFO     | mean x: 1748910416.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,795 | INFO     | mean y: 2465731.765258216
[2025-06-03 04:29:42] 2025-06-03 02:16:30,795 | INFO     | -- intersect: -1280246228.8101652
[2025-06-03 04:29:42] 2025-06-03 02:16:30,795 | INFO     | intersect: -1280246228.8101652
[2025-06-03 04:29:42] 2025-06-03 02:16:30,796 | INFO     | chi2: 3.5385199765098214
[2025-06-03 04:29:42] 2025-06-03 02:16:30,796 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,806 | INFO     | sum of deviations: 30827175238.499992
[2025-06-03 04:29:42] 2025-06-03 02:16:30,806 | INFO     | mean x: 1748910263.5
[2025-06-03 04:29:42] 2025-06-03 02:16:30,806 | INFO     | mean y: 2486614.6009615385
[2025-06-03 04:29:42] 2025-06-03 02:16:30,806 | INFO     | -- intersect: -19319103602.417057
[2025-06-03 04:29:42] 2025-06-03 02:16:30,807 | INFO     | intersect: -19319103602.417057
[2025-06-03 04:29:42] 2025-06-03 02:16:30,807 | INFO     | chi2: 1.901699764297967
[2025-06-03 04:29:42] 2025-06-03 02:16:30,807 | INFO     | current chi2=1.901699764297967 (change=46.25719857674262 %)
[2025-06-03 04:29:42] 2025-06-03 02:16:30,807 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,809 | INFO     | sum of deviations: 30308477141.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,809 | INFO     | mean x: 1748910111.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,809 | INFO     | mean y: 2486211.8325123154
[2025-06-03 04:29:42] 2025-06-03 02:16:30,809 | INFO     | -- intersect: -20432559119.285652
[2025-06-03 04:29:42] 2025-06-03 02:16:30,809 | INFO     | intersect: -20432559119.285652
[2025-06-03 04:29:42] 2025-06-03 02:16:30,810 | INFO     | chi2: 1.9028761813623454
[2025-06-03 04:29:42] 2025-06-03 02:16:30,810 | INFO     | current chi2=1.9028761813623454 (change=-0.06186134564794035 %)
[2025-06-03 04:29:42] 2025-06-03 02:16:30,810 | INFO     | right removable region: 202
[2025-06-03 04:29:42] 2025-06-03 02:16:30,810 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,812 | INFO     | sum of deviations: -39722381258.00001
[2025-06-03 04:29:42] 2025-06-03 02:16:30,812 | INFO     | mean x: 1748910568.5
[2025-06-03 04:29:42] 2025-06-03 02:16:30,812 | INFO     | mean y: 2496543.903846154
[2025-06-03 04:29:42] 2025-06-03 02:16:30,812 | INFO     | -- intersect: 24899351381.263813
[2025-06-03 04:29:42] 2025-06-03 02:16:30,812 | INFO     | intersect: 24899351381.263813
[2025-06-03 04:29:42] 2025-06-03 02:16:30,813 | INFO     | chi2: 1.7486132240937167
[2025-06-03 04:29:42] 2025-06-03 02:16:30,813 | INFO     | current chi2=1.7486132240937167 (change=50.58348587257543 %)
[2025-06-03 04:29:42] 2025-06-03 02:16:30,813 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,814 | INFO     | sum of deviations: -44344929416.000015
[2025-06-03 04:29:42] 2025-06-03 02:16:30,815 | INFO     | mean x: 1748910721.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,815 | INFO     | mean y: 2500090.9261083743
[2025-06-03 04:29:42] 2025-06-03 02:16:30,815 | INFO     | -- intersect: 29901427532.06608
[2025-06-03 04:29:42] 2025-06-03 02:16:30,815 | INFO     | intersect: 29901427532.06608
[2025-06-03 04:29:42] 2025-06-03 02:16:30,815 | INFO     | chi2: 1.7052199374024526
[2025-06-03 04:29:42] 2025-06-03 02:16:30,815 | INFO     | current chi2=1.7052199374024526 (change=2.4815828962836677 %)
[2025-06-03 04:29:42] 2025-06-03 02:16:30,815 | INFO     | left removable region: 20
[2025-06-03 04:29:42] 2025-06-03 02:16:30,826 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 04:29:42] 2025-06-03 02:16:30,828 | INFO     | sum of deviations: -14769761640.0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,828 | INFO     | mean x: 1748910690.5
[2025-06-03 04:29:42] 2025-06-03 02:16:30,828 | INFO     | mean y: 2523038.3846153845
[2025-06-03 04:29:42] 2025-06-03 02:16:30,828 | INFO     | -- intersect: 13821046570.676596
[2025-06-03 04:29:42] 2025-06-03 02:16:30,828 | INFO     | intersect: 13821046570.676596
[2025-06-03 04:29:42] 2025-06-03 02:16:30,828 | INFO     | chi2: 0.015546565969109461
[2025-06-03 04:29:42] 2025-06-03 02:16:30,829 | INFO     | -- intersect: 13821046570.676596
[2025-06-03 04:29:42] 2025-06-03 02:16:30,829 | INFO     | current memory leak: -7.90 B/s (using 182 data points, chi2=0.02)
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | ..............................
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . Timing measurements:
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . get job = 0 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . initial setup = 2 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . payload setup = 16 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . stage-in = 0 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . payload execution = 12955 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . stage-out = 3 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | . log creation = 1 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,830 | INFO     | ..............................
[2025-06-03 04:29:42] 2025-06-03 02:16:30,992 | INFO     | 
[2025-06-03 04:29:42] 2025-06-03 02:16:30,992 | INFO     | job summary report
[2025-06-03 04:29:42] 2025-06-03 02:16:30,992 | INFO     | --------------------------------------------------
[2025-06-03 04:29:42] 2025-06-03 02:16:30,992 | INFO     | PanDA job id: 6677383247
[2025-06-03 04:29:42] 2025-06-03 02:16:30,992 | INFO     | task id: 45006595
[2025-06-03 04:29:42] 2025-06-03 02:16:30,992 | INFO     | errors: (none)
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | pilot state: finished 
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | transexitcode: 0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | exeerrorcode: 0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | exeerrordiag: 
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | exitcode: 0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | exitmsg: OK
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | cpuconsumptiontime: 47865 s
[2025-06-03 04:29:42] 2025-06-03 02:16:30,993 | INFO     | nevents: 400
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | neventsw: 0
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | pid: 28338
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | pgrp: 28338
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | corecount: 8
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | event service: False
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | sizes: {0: 2405006, 1: 2405205, 10: 2405411, 12: 2405439, 12977: 2434959, 12981: 2443900, 12984: 2444084, 13080: 2444254}
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | --------------------------------------------------
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | 
[2025-06-03 04:29:42] 2025-06-03 02:16:30,994 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 04:29:42] 2025-06-03 02:16:31,597 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,597 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,599 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:29:42] 2025-06-03 02:16:31,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,599 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:29:42] 2025-06-03 02:16:31,599 | INFO     | job 6677383247 has completed (purged errors)
[2025-06-03 04:29:42] 2025-06-03 02:16:31,599 | INFO     | overall cleanup function is called
[2025-06-03 04:29:42] 2025-06-03 02:16:32,609 | INFO     | --- collectZombieJob: --- 10, [28338]
[2025-06-03 04:29:42] 2025-06-03 02:16:32,609 | INFO     | zombie collector waiting for pid 28338
[2025-06-03 04:29:42] 2025-06-03 02:16:32,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:29:42] 2025-06-03 02:16:32,609 | INFO     | collected zombie processes
[2025-06-03 04:29:42] 2025-06-03 02:16:32,609 | INFO     | will attempt to kill all subprocesses of pid=28338
[2025-06-03 04:29:42] 2025-06-03 02:16:32,722 | INFO     | process IDs to be killed: [28338] (in reverse order)
[2025-06-03 04:29:42] 2025-06-03 02:16:33,438 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:29:42] 2025-06-03 02:16:33,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:29:42] 2025-06-03 02:16:33,442 | INFO     | did not find any defunct processes belonging to 28338
[2025-06-03 04:29:42] 2025-06-03 02:16:33,445 | INFO     | did not find any defunct processes belonging to 28338
[2025-06-03 04:29:42] 2025-06-03 02:16:33,445 | INFO     | ready for new job
[2025-06-03 04:29:42] 2025-06-03 02:16:33,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:29:42] 2025-06-03 02:16:33,447 | INFO     | **************************************
[2025-06-03 04:29:42] 2025-06-03 02:16:33,447 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:29:42] 2025-06-03 02:16:33,447 | INFO     | **************************************
[2025-06-03 04:29:42] 2025-06-03 02:16:33,447 | INFO     | 
[2025-06-03 04:29:42] 2025-06-03 02:16:33,448 | INFO     | pilot is running in a VM
[2025-06-03 04:29:42] 2025-06-03 02:16:33,448 | INFO     | architecture information:
[2025-06-03 04:29:42] 2025-06-03 02:16:33,460 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:29:42] 2025-06-03 02:16:33,564 | INFO     | cat /etc/os-release:
[2025-06-03 04:29:42] NAME="CentOS Linux"
[2025-06-03 04:29:42] VERSION="7 (Core)"
[2025-06-03 04:29:42] ID="centos"
[2025-06-03 04:29:42] ID_LIKE="rhel fedora"
[2025-06-03 04:29:42] VERSION_ID="7"
[2025-06-03 04:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:29:42] ANSI_COLOR="0;31"
[2025-06-03 04:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:29:42] HOME_URL="https://www.centos.org/"
[2025-06-03 04:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:29:42] 
[2025-06-03 04:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:29:42] 
[2025-06-03 04:29:42] 2025-06-03 02:16:33,564 | INFO     | **************************************
[2025-06-03 04:29:42] 2025-06-03 02:16:34,068 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 04:29:42] 2025-06-03 02:16:34,307 | INFO     | sufficient remaining disk space (496973643776 B)
[2025-06-03 04:29:42] 2025-06-03 02:16:34,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:29:42] 2025-06-03 02:16:34,308 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:29:42] 2025-06-03 02:16:34,308 | INFO     | update_server=False
[2025-06-03 04:29:42] 2025-06-03 02:16:34,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:29:42] 2025-06-03 02:16:34,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:29:42] 2025-06-03 02:16:34,309 | INFO     | aborting loop
[2025-06-03 04:29:42] 2025-06-03 02:16:34,498 | INFO     | all data control threads have been joined
[2025-06-03 04:29:42] 2025-06-03 02:16:34,865 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:29:42] 2025-06-03 02:16:34,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:29:42] 2025-06-03 02:16:34,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:29:42] 2025-06-03 02:16:35,018 | INFO     | all payload control threads have been joined
[2025-06-03 04:29:42] 2025-06-03 02:16:35,314 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,315 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,380 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,492 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,503 | INFO     | [data] control thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,517 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:29:42] 2025-06-03 02:16:35,662 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,830 | INFO     | all job control threads have been joined
[2025-06-03 04:29:42] 2025-06-03 02:16:35,908 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:35,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:29:42] 2025-06-03 02:16:36,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:29:42] 2025-06-03 02:16:36,024 | INFO     | [payload] control thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:36,217 | INFO     | [job] validate thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:36,805 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:36,836 | INFO     | [job] control thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:36,910 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:37,014 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:37,591 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:39,937 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:29:42] 2025-06-03 02:16:40,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462077716288)>', '<ExcThread(monitor, started 140461620565760)>']
[2025-06-03 04:29:42] 2025-06-03 02:16:40,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:29:42] 2025-06-03 02:16:40,901 | INFO     | [monitor] control thread has ended
[2025-06-03 04:29:42] 2025-06-03 02:16:45,044 | INFO     | all workflow threads have been joined
[2025-06-03 04:29:42] 2025-06-03 02:16:45,044 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:29:42] 2025-06-03 02:16:45,044 | INFO     | traces error code: 0
[2025-06-03 04:29:42] 2025-06-03 02:16:45,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:29:42] 2025-06-03 02:16:45,310 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:29:42] 2025-06-03 02:16:45,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:29:42] 2025-06-03 02:16:45,327 [wrapper] pilotpid: 21308
[2025-06-03 04:29:42] 2025-06-03 02:16:45,336 [wrapper] Pilot exit status: 0
[2025-06-03 04:29:42] 2025-06-03 02:16:45,811 [wrapper] pandaids: 6677383247
[2025-06-03 04:29:42] 2025-06-03 02:16:46,429 [wrapper] cleanup supervisor_pilot 21277 21309
[2025-06-03 04:29:42] 2025-06-03 02:16:46,525 [wrapper] Test setup, not cleaning
[2025-06-03 04:29:42] 2025-06-03 02:16:46,617 [wrapper] apfmon messages muted
[2025-06-03 04:29:42] 2025-06-03 02:16:46,730 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:29:42] 2025-06-03 02:16:46,857 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:29:42]  *** Error codes and diagnostics ***
[2025-06-03 04:29:42]     "exeErrorCode": 0,
[2025-06-03 04:29:42]     "exeErrorDiag": "",
[2025-06-03 04:29:42]     "pilotErrorCode": 0,
[2025-06-03 04:29:42]     "pilotErrorDiag": "",
[2025-06-03 04:29:42]  *** Listing of results directory ***
[2025-06-03 04:29:42] total 391072
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:11 pilot3.tar.gz
[2025-06-03 04:29:42] -rwx------. 1 boinc boinc     37140 Jun  2 18:20 runpilot2-wrapper.sh
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:20 queuedata.json
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:29:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:37 run_atlas
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:37 job.xml
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc      6392 Jun  3 00:37 init_data.xml
[2025-06-03 04:29:42] -rw-r--r--. 2 boinc boinc 214417678 Jun  3 00:37 EVNT.45006593._000139.pool.root.1
[2025-06-03 04:29:42] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:37 start_atlas.sh
[2025-06-03 04:29:42] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:37 shared
[2025-06-03 04:29:42] -rw-r--r--. 2 boinc boinc    508875 Jun  3 00:37 input.tar.gz
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:37 boinc_lockfile
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc      2521 Jun  3 00:37 pandaJob.out
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc    987975 Jun  3 00:38 agis_schedconf.cvmfs.json
[2025-06-03 04:29:42] drwx------. 4 boinc boinc      4096 Jun  3 00:38 pilot3
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc 179164999 Jun  3 04:13 HITS.45006595._003471.pool.root.1
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc       531 Jun  3 04:13 boinc_task_state.xml
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc      1021 Jun  3 04:14 memory_monitor_summary.json
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc   1603667 Jun  3 04:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc    383938 Jun  3 04:14 log.45006595._003471.job.log.tgz.1
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc        95 Jun  3 04:16 pilot_heartbeat.json
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc      7693 Jun  3 04:16 heartbeat.json
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc      4416 Jun  3 04:16 pilotlog.txt
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc   1142217 Jun  3 04:16 log.45006595._003471.job.log.1
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc       357 Jun  3 04:16 output.list
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc       620 Jun  3 04:16 runtime_log
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc   1546240 Jun  3 04:16 result.tar.gz
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc      8659 Jun  3 04:16 runtime_log.err
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc       656 Jun  3 04:16 dJQMDmn4Mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKLfKDmnOpdDo.diag
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc      8192 Jun  3 04:29 boinc_mmap_file
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc        28 Jun  3 04:29 wrapper_checkpoint.txt
[2025-06-03 04:29:42] -rw-r--r--. 1 boinc boinc     20441 Jun  3 04:29 stderr.txt
[2025-06-03 04:29:42] HITS file was successfully produced:
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc 179164999 Jun  3 04:13 shared/HITS.pool.root.1
[2025-06-03 04:29:42]  *** Contents of shared directory: ***
[2025-06-03 04:29:42] total 386392
[2025-06-03 04:29:42] -rw-r--r--. 2 boinc boinc 214417678 Jun  3 00:37 ATLAS.root_0
[2025-06-03 04:29:42] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:37 start_atlas.sh
[2025-06-03 04:29:42] -rw-r--r--. 2 boinc boinc    508875 Jun  3 00:37 input.tar.gz
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc 179164999 Jun  3 04:13 HITS.pool.root.1
[2025-06-03 04:29:42] -rw-------. 1 boinc boinc   1546240 Jun  3 04:16 result.tar.gz
04:29:44 (15737): run_atlas exited; CPU time 48028.093494
04:29:44 (15737): called boinc_finish(0)

</stderr_txt>
]]>

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