Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:03:39 (3856407): wrapper (7.7.26015): starting
17:03:39 (3856407): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 17:03:39] Arguments: --nthreads 4
[2025-06-04 17:03:39] Threads: 4
[2025-06-04 17:03:39] Checking for CVMFS
[2025-06-04 17:03:39] No cvmfs_config command found, will try listing directly
[2025-06-04 17:03:39] CVMFS is ok
[2025-06-04 17:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:03:39] Further information can be found at the LHC@home message board.
[2025-06-04 17:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:03:39] Checking for apptainer binary...
[2025-06-04 17:03:39] which: no apptainer in ((null))
[2025-06-04 17:03:39] apptainer is not installed, using version from CVMFS
[2025-06-04 17:03:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:03:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-04 17:03:39] apptainer works
[2025-06-04 17:03:39] Set ATHENA_PROC_NUMBER=4
[2025-06-04 17:03:39] Set ATHENA_CORE_NUMBER=4
[2025-06-04 17:03:40] Starting ATLAS job with PandaID=6677375808
[2025-06-04 17:03:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:39:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:39:51] 2025-06-04 17:35:48,124 | INFO     | executing command: lscpu
[2025-06-04 19:39:51] 2025-06-04 17:35:48,189 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 19:39:51] 2025-06-04 17:35:49,346 | INFO     | monitor loop #664: job 0:6677375808 is in state 'finished'
[2025-06-04 19:39:51] 2025-06-04 17:35:49,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:39:51] 2025-06-04 17:35:51,850 | INFO     | monitor loop #665: job 0:6677375808 is in state 'finished'
[2025-06-04 19:39:51] 2025-06-04 17:35:51,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,575 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 19:39:51] 2025-06-04 17:35:52,577 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677375808/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,577 | INFO     | extracted standard info from prmon json
[2025-06-04 19:39:51] 2025-06-04 17:35:52,578 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:39:51] 2025-06-04 17:35:52,578 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:39:51] 2025-06-04 17:35:52,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:39:51] 2025-06-04 17:35:52,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:39:51] 2025-06-04 17:35:52,582 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:39:51] 2025-06-04 17:35:52,582 | INFO     | sum of square deviations: 1025693650.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,583 | INFO     | sum of deviations: 5194583953.999996
[2025-06-04 19:39:51] 2025-06-04 17:35:52,583 | INFO     | mean x: 1749053973.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,583 | INFO     | mean y: 2331313.6912751677
[2025-06-04 19:39:51] 2025-06-04 17:35:52,583 | INFO     | -- intersect: -8855681702.988455
[2025-06-04 19:39:51] 2025-06-04 17:35:52,583 | INFO     | intersect: -8855681702.988455
[2025-06-04 19:39:51] 2025-06-04 17:35:52,584 | INFO     | chi2: 1.6688423541439164
[2025-06-04 19:39:51] 2025-06-04 17:35:52,584 | INFO     | sum of square deviations: 925859220.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,585 | INFO     | sum of deviations: 4937995078.999997
[2025-06-04 19:39:51] 2025-06-04 17:35:52,585 | INFO     | mean x: 1749053820.5
[2025-06-04 19:39:51] 2025-06-04 17:35:52,585 | INFO     | mean y: 2330921.597222222
[2025-06-04 19:39:51] 2025-06-04 17:35:52,585 | INFO     | -- intersect: -9326105812.591314
[2025-06-04 19:39:51] 2025-06-04 17:35:52,585 | INFO     | intersect: -9326105812.591314
[2025-06-04 19:39:51] 2025-06-04 17:35:52,586 | INFO     | chi2: 1.6697962408857814
[2025-06-04 19:39:51] 2025-06-04 17:35:52,586 | INFO     | current chi2=1.6697962408857814 (change=-0.05715858897615012 %)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,586 | INFO     | right removable region: 143
[2025-06-04 19:39:51] 2025-06-04 17:35:52,586 | INFO     | sum of square deviations: 925859220.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,587 | INFO     | sum of deviations: -14158549203.999998
[2025-06-04 19:39:51] 2025-06-04 17:35:52,587 | INFO     | mean x: 1749054125.5
[2025-06-04 19:39:51] 2025-06-04 17:35:52,587 | INFO     | mean y: 2360327.527777778
[2025-06-04 19:39:51] 2025-06-04 17:35:52,587 | INFO     | -- intersect: 26749481662.400845
[2025-06-04 19:39:51] 2025-06-04 17:35:52,587 | INFO     | intersect: 26749481662.400845
[2025-06-04 19:39:51] 2025-06-04 17:35:52,588 | INFO     | chi2: 0.21253676866631294
[2025-06-04 19:39:51] 2025-06-04 17:35:52,588 | INFO     | current chi2=0.21253676866631294 (change=87.26441906639288 %)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,588 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,589 | INFO     | sum of deviations: -7979975104.000001
[2025-06-04 19:39:51] 2025-06-04 17:35:52,589 | INFO     | mean x: 1749054278.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,589 | INFO     | mean y: 2350162.928057554
[2025-06-04 19:39:51] 2025-06-04 17:35:52,589 | INFO     | -- intersect: 16763525807.250011
[2025-06-04 19:39:51] 2025-06-04 17:35:52,589 | INFO     | intersect: 16763525807.250011
[2025-06-04 19:39:51] 2025-06-04 17:35:52,589 | INFO     | chi2: 0.1650910540260245
[2025-06-04 19:39:51] 2025-06-04 17:35:52,589 | INFO     | current chi2=0.1650910540260245 (change=22.32353250593509 %)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,590 | INFO     | left removable region: 20
[2025-06-04 19:39:51] 2025-06-04 17:35:52,590 | INFO     | sum of square deviations: 576985702.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,590 | INFO     | sum of deviations: 2308687739.9999995
[2025-06-04 19:39:51] 2025-06-04 17:35:52,591 | INFO     | mean x: 1749054400.0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,591 | INFO     | mean y: 2330794.398373984
[2025-06-04 19:39:51] 2025-06-04 17:35:52,591 | INFO     | -- intersect: -6996144966.571272
[2025-06-04 19:39:51] 2025-06-04 17:35:52,591 | INFO     | intersect: -6996144966.571272
[2025-06-04 19:39:51] 2025-06-04 17:35:52,591 | INFO     | chi2: 0.0006544737639033658
[2025-06-04 19:39:51] 2025-06-04 17:35:52,591 | INFO     | -- intersect: -6996144966.571272
[2025-06-04 19:39:51] 2025-06-04 17:35:52,591 | INFO     | current memory leak: 4.00 B/s (using 123 data points, chi2=0.00)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,592 | INFO     | ..............................
[2025-06-04 19:39:51] 2025-06-04 17:35:52,592 | INFO     | . Timing measurements:
[2025-06-04 19:39:51] 2025-06-04 17:35:52,592 | INFO     | . get job = 0 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,592 | INFO     | . initial setup = 1 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,592 | INFO     | . payload setup = 7 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,592 | INFO     | . stage-in = 0 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,593 | INFO     | . payload execution = 9086 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,593 | INFO     | . stage-out = 0 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,593 | INFO     | . log creation = 0 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,593 | INFO     | ..............................
[2025-06-04 19:39:51] 2025-06-04 17:35:52,697 | INFO     | 
[2025-06-04 19:39:51] 2025-06-04 17:35:52,697 | INFO     | job summary report
[2025-06-04 19:39:51] 2025-06-04 17:35:52,697 | INFO     | --------------------------------------------------
[2025-06-04 19:39:51] 2025-06-04 17:35:52,697 | INFO     | PanDA job id: 6677375808
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | task id: 45006595
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | errors: (none)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | pilot state: finished 
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | transexitcode: 0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | exeerrorcode: 0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | exeerrordiag: 
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | exitcode: 0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | exitmsg: OK
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | cpuconsumptiontime: 34674 s
[2025-06-04 19:39:51] 2025-06-04 17:35:52,698 | INFO     | nevents: 400
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | neventsw: 0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | pid: 3867058
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | pgrp: 3867058
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | corecount: 4
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | event service: False
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | sizes: {0: 2397341, 5: 2397547, 11: 2397603, 9098: 2425778, 9100: 2434797, 9107: 2434911}
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | --------------------------------------------------
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | 
[2025-06-04 19:39:51] 2025-06-04 17:35:52,699 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-04 19:39:51] 2025-06-04 17:35:52,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:39:51] 2025-06-04 17:35:52,724 | INFO     | job 6677375808 has completed (purged errors)
[2025-06-04 19:39:51] 2025-06-04 17:35:52,724 | INFO     | overall cleanup function is called
[2025-06-04 19:39:51] 2025-06-04 17:35:53,732 | INFO     | --- collectZombieJob: --- 10, [3867058]
[2025-06-04 19:39:51] 2025-06-04 17:35:53,732 | INFO     | zombie collector waiting for pid 3867058
[2025-06-04 19:39:51] 2025-06-04 17:35:53,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:39:51] 2025-06-04 17:35:53,732 | INFO     | collected zombie processes
[2025-06-04 19:39:51] 2025-06-04 17:35:53,732 | INFO     | will attempt to kill all subprocesses of pid=3867058
[2025-06-04 19:39:51] 2025-06-04 17:35:54,111 | INFO     | process IDs to be killed: [3867058] (in reverse order)
[2025-06-04 19:39:51] 2025-06-04 17:35:54,230 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:39:51] 2025-06-04 17:35:54,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:39:51] 2025-06-04 17:35:54,243 | INFO     | did not find any defunct processes belonging to 3867058
[2025-06-04 19:39:51] 2025-06-04 17:35:54,255 | INFO     | did not find any defunct processes belonging to 3867058
[2025-06-04 19:39:51] 2025-06-04 17:35:54,255 | INFO     | ready for new job
[2025-06-04 19:39:51] 2025-06-04 17:35:54,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:39:51] 2025-06-04 17:35:54,257 | INFO     | **************************************
[2025-06-04 19:39:51] 2025-06-04 17:35:54,258 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:39:51] 2025-06-04 17:35:54,258 | INFO     | **************************************
[2025-06-04 19:39:51] 2025-06-04 17:35:54,258 | INFO     | 
[2025-06-04 19:39:51] 2025-06-04 17:35:54,262 | INFO     | architecture information:
[2025-06-04 19:39:51] 2025-06-04 17:35:54,262 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:39:51] 2025-06-04 17:35:54,278 | INFO     | cat /etc/os-release:
[2025-06-04 19:39:51] NAME="CentOS Linux"
[2025-06-04 19:39:51] VERSION="7 (Core)"
[2025-06-04 19:39:51] ID="centos"
[2025-06-04 19:39:51] ID_LIKE="rhel fedora"
[2025-06-04 19:39:51] VERSION_ID="7"
[2025-06-04 19:39:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:39:51] ANSI_COLOR="0;31"
[2025-06-04 19:39:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:39:51] HOME_URL="https://www.centos.org/"
[2025-06-04 19:39:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:39:51] 
[2025-06-04 19:39:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:39:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:39:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:39:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:39:51] 
[2025-06-04 19:39:51] 2025-06-04 17:35:54,279 | INFO     | **************************************
[2025-06-04 19:39:51] 2025-06-04 17:35:54,782 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-04 19:39:51] 2025-06-04 17:35:54,800 | INFO     | sufficient remaining disk space (646828785664 B)
[2025-06-04 19:39:51] 2025-06-04 17:35:54,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:39:51] 2025-06-04 17:35:54,801 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:39:51] 2025-06-04 17:35:54,801 | INFO     | update_server=False
[2025-06-04 19:39:51] 2025-06-04 17:35:54,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:39:51] 2025-06-04 17:35:54,801 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:39:51] 2025-06-04 17:35:54,802 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:39:51] 2025-06-04 17:35:54,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:39:51] 2025-06-04 17:35:54,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:39:51] 2025-06-04 17:35:55,290 | INFO     | all job control threads have been joined
[2025-06-04 19:39:51] 2025-06-04 17:35:55,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:39:51] 2025-06-04 17:35:55,358 | INFO     | aborting loop
[2025-06-04 19:39:51] 2025-06-04 17:35:55,450 | INFO     | all data control threads have been joined
[2025-06-04 19:39:51] 2025-06-04 17:35:55,806 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:56,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:39:51] 2025-06-04 17:35:56,237 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:56,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:39:51] 2025-06-04 17:35:56,276 | INFO     | all payload control threads have been joined
[2025-06-04 19:39:51] 2025-06-04 17:35:56,295 | INFO     | [job] control thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:56,363 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:56,455 | INFO     | [data] control thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:56,739 | INFO     | [job] validate thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:56,835 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:57,071 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:57,161 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:57,217 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:57,279 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:57,281 | INFO     | [payload] control thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:57,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:39:51] 2025-06-04 17:35:58,168 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:35:58,711 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:36:00,274 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:36:05,803 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:39:51] 2025-06-04 17:36:06,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:39:51] 2025-06-04 17:36:08,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22757096503104)>', '<ExcThread(monitor, started 22756856919808)>']
[2025-06-04 19:39:51] 2025-06-04 17:36:08,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:39:51] 2025-06-04 17:36:08,873 | INFO     | [monitor] control thread has ended
[2025-06-04 19:39:51] 2025-06-04 17:36:13,166 | INFO     | all workflow threads have been joined
[2025-06-04 19:39:51] 2025-06-04 17:36:13,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:39:51] 2025-06-04 17:36:13,166 | INFO     | traces error code: 0
[2025-06-04 19:39:51] 2025-06-04 17:36:13,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:39:51] 2025-06-04 17:36:13,340 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:39:51] 2025-06-04 17:36:13,343 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:39:51] 2025-06-04 17:36:13,346 [wrapper] pilotpid: 3860072
[2025-06-04 19:39:51] 2025-06-04 17:36:13,349 [wrapper] Pilot exit status: 0
[2025-06-04 19:39:51] 2025-06-04 17:36:13,360 [wrapper] pandaids: 6677375808
[2025-06-04 19:39:51] 2025-06-04 17:36:13,431 [wrapper] cleanup supervisor_pilot 4151463 3860073
[2025-06-04 19:39:51] 2025-06-04 17:36:13,434 [wrapper] Test setup, not cleaning
[2025-06-04 19:39:51] 2025-06-04 17:36:13,437 [wrapper] apfmon messages muted
[2025-06-04 19:39:51] 2025-06-04 17:36:13,440 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:39:51] 2025-06-04 17:36:13,443 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:39:51]  *** Error codes and diagnostics ***
[2025-06-04 19:39:51]     "exeErrorCode": 0,
[2025-06-04 19:39:51]     "exeErrorDiag": "",
[2025-06-04 19:39:51]     "pilotErrorCode": 0,
[2025-06-04 19:39:51]     "pilotErrorDiag": "",
[2025-06-04 19:39:51]  *** Listing of results directory ***
[2025-06-04 19:39:51] total 386532
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:48 queuedata.json
[2025-06-04 19:39:51] -rwx------ 1 boinc boinc     37140 Jun  2 17:48 runpilot2-wrapper.sh
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:39:51] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:03 run_atlas
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:03 job.xml
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc      6636 Jun  4 17:03 init_data.xml
[2025-06-04 19:39:51] -rw-r--r-- 2 boinc boinc 214029348 Jun  4 17:03 EVNT.45006593._000013.pool.root.1
[2025-06-04 19:39:51] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:03 start_atlas.sh
[2025-06-04 19:39:51] drwxrwx--x 2 boinc boinc      4096 Jun  4 17:03 shared
[2025-06-04 19:39:51] -rw-r--r-- 2 boinc boinc    508870 Jun  4 17:03 input.tar.gz
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:03 boinc_lockfile
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc      2519 Jun  4 17:03 pandaJob.out
[2025-06-04 19:39:51] -rw------- 1 boinc boinc    987207 Jun  4 17:03 agis_schedconf.cvmfs.json
[2025-06-04 19:39:51] -rw------- 1 boinc boinc   1598969 Jun  4 17:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:39:51] drwx------ 4 boinc boinc      4096 Jun  4 17:03 pilot3
[2025-06-04 19:39:51] -rw------- 1 boinc boinc 175607589 Jun  4 19:35 HITS.45006595._000323.pool.root.1
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc       529 Jun  4 19:35 boinc_task_state.xml
[2025-06-04 19:39:51] -rw------- 1 boinc boinc        95 Jun  4 19:35 pilot_heartbeat.json
[2025-06-04 19:39:51] -rw------- 1 boinc boinc      1034 Jun  4 19:35 memory_monitor_summary.json
[2025-06-04 19:39:51] -rw------- 1 boinc boinc    299623 Jun  4 19:35 log.45006595._000323.job.log.tgz.1
[2025-06-04 19:39:51] -rw------- 1 boinc boinc      7717 Jun  4 19:35 heartbeat.json
[2025-06-04 19:39:51] -rw------- 1 boinc boinc      4558 Jun  4 19:36 pilotlog.txt
[2025-06-04 19:39:51] -rw------- 1 boinc boinc    864823 Jun  4 19:36 log.45006595._000323.job.log.1
[2025-06-04 19:39:51] -rw------- 1 boinc boinc       357 Jun  4 19:36 output.list
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc       620 Jun  4 19:36 runtime_log
[2025-06-04 19:39:51] -rw------- 1 boinc boinc   1187840 Jun  4 19:36 result.tar.gz
[2025-06-04 19:39:51] -rw------- 1 boinc boinc       662 Jun  4 19:36 yoZNDmuZMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfUVKDmQUz0Sn.diag
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc      9025 Jun  4 19:36 runtime_log.err
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc      8192 Jun  4 19:39 boinc_mmap_file
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc        26 Jun  4 19:39 wrapper_checkpoint.txt
[2025-06-04 19:39:51] -rw-r--r-- 1 boinc boinc     20900 Jun  4 19:39 stderr.txt
[2025-06-04 19:39:51] HITS file was successfully produced:
[2025-06-04 19:39:51] -rw------- 1 boinc boinc 175607589 Jun  4 19:35 shared/HITS.pool.root.1
[2025-06-04 19:39:51]  *** Contents of shared directory: ***
[2025-06-04 19:39:51] total 382192
[2025-06-04 19:39:51] -rw-r--r-- 2 boinc boinc 214029348 Jun  4 17:03 ATLAS.root_0
[2025-06-04 19:39:51] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:03 start_atlas.sh
[2025-06-04 19:39:51] -rw-r--r-- 2 boinc boinc    508870 Jun  4 17:03 input.tar.gz
[2025-06-04 19:39:51] -rw------- 1 boinc boinc 175607589 Jun  4 19:35 HITS.pool.root.1
[2025-06-04 19:39:51] -rw------- 1 boinc boinc   1187840 Jun  4 19:36 result.tar.gz
19:39:53 (3856407): run_atlas exited; CPU time 35028.914990
19:39:53 (3856407): called boinc_finish(0)

</stderr_txt>
]]>

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