Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:11:55 (2769590): wrapper (7.7.26015): starting
06:11:55 (2769590): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 06:11:55] Arguments: --nthreads 4
[2025-06-04 06:11:55] Threads: 4
[2025-06-04 06:11:55] Checking for CVMFS
[2025-06-04 06:11:55] No cvmfs_config command found, will try listing directly
[2025-06-04 06:11:55] CVMFS is ok
[2025-06-04 06:11:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:11:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:11:55] Further information can be found at the LHC@home message board.
[2025-06-04 06:11:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:11:55] Checking for apptainer binary...
[2025-06-04 06:11:55] which: no apptainer in ((null))
[2025-06-04 06:11:55] apptainer is not installed, using version from CVMFS
[2025-06-04 06:11:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:11:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-04 06:11:55] apptainer works
[2025-06-04 06:11:55] Set ATHENA_PROC_NUMBER=4
[2025-06-04 06:11:55] Set ATHENA_CORE_NUMBER=4
[2025-06-04 06:11:55] Starting ATLAS job with PandaID=6677383269
[2025-06-04 06:11:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:50:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:50:56] 2025-06-04 06:48:56,021 | WARNING  | process 2780339 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 08:50:56] 2025-06-04 06:48:56,021 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677383269/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:50:56] 2025-06-04 06:48:56,375 | INFO     | number of running child processes to parent process 2780339: 1
[2025-06-04 08:50:56] 2025-06-04 06:48:56,375 | INFO     | maximum number of monitored processes: 6
[2025-06-04 08:50:56] 2025-06-04 06:48:58,878 | INFO     | monitor loop #687: job 0:6677383269 is in state 'finished'
[2025-06-04 08:50:56] 2025-06-04 06:48:58,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,108 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 08:50:56] 2025-06-04 06:49:00,109 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677383269/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,109 | INFO     | extracted standard info from prmon json
[2025-06-04 08:50:56] 2025-06-04 06:49:00,110 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:50:56] 2025-06-04 06:49:00,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:50:56] 2025-06-04 06:49:00,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:50:56] 2025-06-04 06:49:00,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:50:56] 2025-06-04 06:49:00,114 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:50:56] 2025-06-04 06:49:00,114 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 08:50:56] 2025-06-04 06:49:00,115 | INFO     | sum of deviations: -11730504228.000002
[2025-06-04 08:50:56] 2025-06-04 06:49:00,116 | INFO     | mean x: 1749015020.5
[2025-06-04 08:50:56] 2025-06-04 06:49:00,116 | INFO     | mean y: 2362993.7792207794
[2025-06-04 08:50:56] 2025-06-04 06:49:00,116 | INFO     | -- intersect: 18119432303.199608
[2025-06-04 08:50:56] 2025-06-04 06:49:00,116 | INFO     | intersect: 18119432303.199608
[2025-06-04 08:50:56] 2025-06-04 06:49:00,116 | INFO     | chi2: 1.7589994437673933
[2025-06-04 08:50:56] 2025-06-04 06:49:00,117 | INFO     | sum of square deviations: 1025693650.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,118 | INFO     | sum of deviations: -11174097059.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,118 | INFO     | mean x: 1749014868.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,118 | INFO     | mean y: 2363789.0201342283
[2025-06-04 08:50:56] 2025-06-04 06:49:00,118 | INFO     | -- intersect: 19056456492.690544
[2025-06-04 08:50:56] 2025-06-04 06:49:00,118 | INFO     | intersect: 19056456492.690544
[2025-06-04 08:50:56] 2025-06-04 06:49:00,118 | INFO     | chi2: 1.7562356720719734
[2025-06-04 08:50:56] 2025-06-04 06:49:00,119 | INFO     | current chi2=1.7562356720719734 (change=0.15712180610475138 %)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,119 | INFO     | right removable region: 148
[2025-06-04 08:50:56] 2025-06-04 06:49:00,119 | INFO     | sum of square deviations: 1025693650.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,120 | INFO     | sum of deviations: -33411102451.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,120 | INFO     | mean x: 1749015173.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,120 | INFO     | mean y: 2393473.6845637583
[2025-06-04 08:50:56] 2025-06-04 06:49:00,120 | INFO     | -- intersect: 56975082281.35778
[2025-06-04 08:50:56] 2025-06-04 06:49:00,121 | INFO     | intersect: 56975082281.35778
[2025-06-04 08:50:56] 2025-06-04 06:49:00,121 | INFO     | chi2: 0.23659372846943466
[2025-06-04 08:50:56] 2025-06-04 06:49:00,121 | INFO     | current chi2=0.23659372846943466 (change=86.5495279542157 %)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,121 | INFO     | sum of square deviations: 925859220.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,122 | INFO     | sum of deviations: -28634009786.500008
[2025-06-04 08:50:56] 2025-06-04 06:49:00,122 | INFO     | mean x: 1749015325.5
[2025-06-04 08:50:56] 2025-06-04 06:49:00,122 | INFO     | mean y: 2386135.715277778
[2025-06-04 08:50:56] 2025-06-04 06:49:00,123 | INFO     | -- intersect: 54094110736.24957
[2025-06-04 08:50:56] 2025-06-04 06:49:00,123 | INFO     | intersect: 54094110736.24957
[2025-06-04 08:50:56] 2025-06-04 06:49:00,123 | INFO     | chi2: 0.22902134869678573
[2025-06-04 08:50:56] 2025-06-04 06:49:00,123 | INFO     | current chi2=0.22902134869678573 (change=3.200583473465656 %)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,123 | INFO     | left removable region: 20
[2025-06-04 08:50:56] 2025-06-04 06:49:00,123 | INFO     | sum of square deviations: 650252192.0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,124 | INFO     | sum of deviations: -13907647389.5
[2025-06-04 08:50:56] 2025-06-04 06:49:00,124 | INFO     | mean x: 1749015447.5
[2025-06-04 08:50:56] 2025-06-04 06:49:00,124 | INFO     | mean y: 2363092.8828125
[2025-06-04 08:50:56] 2025-06-04 06:49:00,124 | INFO     | -- intersect: 37410449404.44506
[2025-06-04 08:50:56] 2025-06-04 06:49:00,125 | INFO     | intersect: 37410449404.44506
[2025-06-04 08:50:56] 2025-06-04 06:49:00,125 | INFO     | chi2: 0.1440469857460218
[2025-06-04 08:50:56] 2025-06-04 06:49:00,125 | INFO     | -- intersect: 37410449404.44506
[2025-06-04 08:50:56] 2025-06-04 06:49:00,125 | INFO     | current memory leak: -21.39 B/s (using 128 data points, chi2=0.14)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,126 | INFO     | ..............................
[2025-06-04 08:50:56] 2025-06-04 06:49:00,126 | INFO     | . Timing measurements:
[2025-06-04 08:50:56] 2025-06-04 06:49:00,126 | INFO     | . get job = 0 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,126 | INFO     | . initial setup = 1 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,126 | INFO     | . payload setup = 7 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,126 | INFO     | . stage-in = 0 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,127 | INFO     | . payload execution = 9376 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,127 | INFO     | . stage-out = 0 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,127 | INFO     | . log creation = 0 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,127 | INFO     | ..............................
[2025-06-04 08:50:56] 2025-06-04 06:49:00,340 | INFO     | 
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | job summary report
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | --------------------------------------------------
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | PanDA job id: 6677383269
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | task id: 45006595
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | errors: (none)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | pilot state: finished 
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | transexitcode: 0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | exeerrorcode: 0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,341 | INFO     | exeerrordiag: 
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | exitcode: 0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | exitmsg: OK
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | cpuconsumptiontime: 35507 s
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | nevents: 400
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | neventsw: 0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | pid: 2780339
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | pgrp: 2780339
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | corecount: 4
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | event service: False
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | sizes: {0: 2405017, 1: 2405216, 5: 2405422, 11: 2405478, 9387: 2433740, 9389: 2442703, 9392: 2442887, 9398: 2443057}
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | --------------------------------------------------
[2025-06-04 08:50:56] 2025-06-04 06:49:00,342 | INFO     | 
[2025-06-04 08:50:56] 2025-06-04 06:49:00,343 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-04 08:50:56] 2025-06-04 06:49:00,363 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,364 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,364 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | job 6677383269 has completed (purged errors)
[2025-06-04 08:50:56] 2025-06-04 06:49:00,366 | INFO     | overall cleanup function is called
[2025-06-04 08:50:56] 2025-06-04 06:49:01,374 | INFO     | --- collectZombieJob: --- 10, [2780339]
[2025-06-04 08:50:56] 2025-06-04 06:49:01,374 | INFO     | zombie collector waiting for pid 2780339
[2025-06-04 08:50:56] 2025-06-04 06:49:01,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:50:56] 2025-06-04 06:49:01,374 | INFO     | collected zombie processes
[2025-06-04 08:50:56] 2025-06-04 06:49:01,374 | INFO     | will attempt to kill all subprocesses of pid=2780339
[2025-06-04 08:50:56] 2025-06-04 06:49:01,738 | INFO     | process IDs to be killed: [2780339] (in reverse order)
[2025-06-04 08:50:56] 2025-06-04 06:49:01,855 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:50:56] 2025-06-04 06:49:01,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:50:56] 2025-06-04 06:49:01,867 | INFO     | did not find any defunct processes belonging to 2780339
[2025-06-04 08:50:56] 2025-06-04 06:49:01,879 | INFO     | did not find any defunct processes belonging to 2780339
[2025-06-04 08:50:56] 2025-06-04 06:49:01,879 | INFO     | ready for new job
[2025-06-04 08:50:56] 2025-06-04 06:49:01,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:50:56] 2025-06-04 06:49:01,881 | INFO     | **************************************
[2025-06-04 08:50:56] 2025-06-04 06:49:01,881 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:50:56] 2025-06-04 06:49:01,881 | INFO     | **************************************
[2025-06-04 08:50:56] 2025-06-04 06:49:01,881 | INFO     | 
[2025-06-04 08:50:56] 2025-06-04 06:49:01,885 | INFO     | architecture information:
[2025-06-04 08:50:56] 2025-06-04 06:49:01,886 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:50:56] 2025-06-04 06:49:01,901 | INFO     | cat /etc/os-release:
[2025-06-04 08:50:56] NAME="CentOS Linux"
[2025-06-04 08:50:56] VERSION="7 (Core)"
[2025-06-04 08:50:56] ID="centos"
[2025-06-04 08:50:56] ID_LIKE="rhel fedora"
[2025-06-04 08:50:56] VERSION_ID="7"
[2025-06-04 08:50:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:50:56] ANSI_COLOR="0;31"
[2025-06-04 08:50:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:50:56] HOME_URL="https://www.centos.org/"
[2025-06-04 08:50:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:50:56] 
[2025-06-04 08:50:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:50:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:50:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:50:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:50:56] 
[2025-06-04 08:50:56] 2025-06-04 06:49:01,902 | INFO     | **************************************
[2025-06-04 08:50:56] 2025-06-04 06:49:02,404 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-04 08:50:56] 2025-06-04 06:49:02,420 | INFO     | sufficient remaining disk space (645945884672 B)
[2025-06-04 08:50:56] 2025-06-04 06:49:02,421 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:50:56] 2025-06-04 06:49:02,421 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:50:56] 2025-06-04 06:49:02,421 | INFO     | update_server=False
[2025-06-04 08:50:56] 2025-06-04 06:49:02,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:50:56] 2025-06-04 06:49:02,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:50:56] 2025-06-04 06:49:02,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:50:56] 2025-06-04 06:49:02,422 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:50:56] 2025-06-04 06:49:02,423 | INFO     | aborting loop
[2025-06-04 08:50:56] 2025-06-04 06:49:02,423 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:50:56] 2025-06-04 06:49:02,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:50:56] 2025-06-04 06:49:02,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:50:56] 2025-06-04 06:49:02,831 | INFO     | all data control threads have been joined
[2025-06-04 08:50:56] 2025-06-04 06:49:02,999 | INFO     | all payload control threads have been joined
[2025-06-04 08:50:56] 2025-06-04 06:49:03,335 | INFO     | all job control threads have been joined
[2025-06-04 08:50:56] 2025-06-04 06:49:03,427 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:03,429 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:03,510 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:03,596 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:03,795 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:03,836 | INFO     | [data] control thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:04,005 | INFO     | [payload] control thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:04,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:50:56] 2025-06-04 06:49:04,336 | INFO     | [job] control thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:04,428 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:04,536 | INFO     | [job] validate thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:04,679 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:04,761 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:04,852 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:05,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:50:56] 2025-06-04 06:49:06,264 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:08,036 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:12,806 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:50:56] 2025-06-04 06:49:13,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:50:56] 2025-06-04 06:49:13,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22515417642816)>', '<ExcThread(monitor, started 22515174823680)>']
[2025-06-04 08:50:56] 2025-06-04 06:49:14,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:50:56] 2025-06-04 06:49:14,480 | INFO     | [monitor] control thread has ended
[2025-06-04 08:50:56] 2025-06-04 06:49:18,951 | INFO     | all workflow threads have been joined
[2025-06-04 08:50:56] 2025-06-04 06:49:18,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:50:56] 2025-06-04 06:49:18,951 | INFO     | traces error code: 0
[2025-06-04 08:50:56] 2025-06-04 06:49:18,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:50:56] 2025-06-04 06:49:19,115 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:50:56] 2025-06-04 06:49:19,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:50:56] 2025-06-04 06:49:19,120 [wrapper] pilotpid: 2773310
[2025-06-04 08:50:56] 2025-06-04 06:49:19,123 [wrapper] Pilot exit status: 0
[2025-06-04 08:50:56] 2025-06-04 06:49:19,133 [wrapper] pandaids: 6677383269
[2025-06-04 08:50:56] 2025-06-04 06:49:19,208 [wrapper] cleanup supervisor_pilot 3017904 2773311
[2025-06-04 08:50:56] 2025-06-04 06:49:19,211 [wrapper] Test setup, not cleaning
[2025-06-04 08:50:56] 2025-06-04 06:49:19,215 [wrapper] apfmon messages muted
[2025-06-04 08:50:56] 2025-06-04 06:49:19,218 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:50:56] 2025-06-04 06:49:19,221 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:50:56]  *** Error codes and diagnostics ***
[2025-06-04 08:50:56]     "exeErrorCode": 0,
[2025-06-04 08:50:56]     "exeErrorDiag": "",
[2025-06-04 08:50:56]     "pilotErrorCode": 0,
[2025-06-04 08:50:56]     "pilotErrorDiag": "",
[2025-06-04 08:50:56]  *** Listing of results directory ***
[2025-06-04 08:50:56] total 395424
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc    495897 Jun  2 18:11 pilot3.tar.gz
[2025-06-04 08:50:56] -rwx------ 1 boinc boinc     37140 Jun  2 18:17 runpilot2-wrapper.sh
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc      5111 Jun  2 18:17 queuedata.json
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:50:56] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:11 run_atlas
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:11 job.xml
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc      6636 Jun  4 06:11 init_data.xml
[2025-06-04 08:50:56] -rw-r--r-- 2 boinc boinc 217317487 Jun  4 06:11 EVNT.45006593._000140.pool.root.1
[2025-06-04 08:50:56] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:11 start_atlas.sh
[2025-06-04 08:50:56] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:11 shared
[2025-06-04 08:50:56] -rw-r--r-- 2 boinc boinc    508874 Jun  4 06:11 input.tar.gz
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:11 boinc_lockfile
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc      2521 Jun  4 06:11 pandaJob.out
[2025-06-04 08:50:56] -rw------- 1 boinc boinc    986077 Jun  4 06:12 agis_schedconf.cvmfs.json
[2025-06-04 08:50:56] -rw------- 1 boinc boinc   1603667 Jun  4 06:12 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:50:56] drwx------ 4 boinc boinc      4096 Jun  4 06:12 pilot3
[2025-06-04 08:50:56] -rw------- 1 boinc boinc 181381501 Jun  4 08:48 HITS.45006595._003493.pool.root.1
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc       528 Jun  4 08:48 boinc_task_state.xml
[2025-06-04 08:50:56] -rw------- 1 boinc boinc      1034 Jun  4 08:48 memory_monitor_summary.json
[2025-06-04 08:50:56] -rw------- 1 boinc boinc        95 Jun  4 08:48 pilot_heartbeat.json
[2025-06-04 08:50:56] -rw------- 1 boinc boinc    296080 Jun  4 08:48 log.45006595._003493.job.log.tgz.1
[2025-06-04 08:50:56] -rw------- 1 boinc boinc      7720 Jun  4 08:49 heartbeat.json
[2025-06-04 08:50:56] -rw------- 1 boinc boinc      4558 Jun  4 08:49 pilotlog.txt
[2025-06-04 08:50:56] -rw------- 1 boinc boinc    892446 Jun  4 08:49 log.45006595._003493.job.log.1
[2025-06-04 08:50:56] -rw------- 1 boinc boinc       357 Jun  4 08:49 output.list
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:49 runtime_log
[2025-06-04 08:50:56] -rw------- 1 boinc boinc   1208320 Jun  4 08:49 result.tar.gz
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc      9025 Jun  4 08:49 runtime_log.err
[2025-06-04 08:50:56] -rw------- 1 boinc boinc       662 Jun  4 08:49 adyKDmh1Mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoJfKDmSBdJUn.diag
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc        26 Jun  4 08:50 wrapper_checkpoint.txt
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:50 boinc_mmap_file
[2025-06-04 08:50:56] -rw-r--r-- 1 boinc boinc     20879 Jun  4 08:50 stderr.txt
[2025-06-04 08:50:56] HITS file was successfully produced:
[2025-06-04 08:50:56] -rw------- 1 boinc boinc 181381501 Jun  4 08:48 shared/HITS.pool.root.1
[2025-06-04 08:50:56]  *** Contents of shared directory: ***
[2025-06-04 08:50:56] total 391064
[2025-06-04 08:50:56] -rw-r--r-- 2 boinc boinc 217317487 Jun  4 06:11 ATLAS.root_0
[2025-06-04 08:50:56] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:11 start_atlas.sh
[2025-06-04 08:50:56] -rw-r--r-- 2 boinc boinc    508874 Jun  4 06:11 input.tar.gz
[2025-06-04 08:50:56] -rw------- 1 boinc boinc 181381501 Jun  4 08:48 HITS.pool.root.1
[2025-06-04 08:50:56] -rw------- 1 boinc boinc   1208320 Jun  4 08:49 result.tar.gz
08:50:57 (2769590): run_atlas exited; CPU time 35849.680427
08:50:57 (2769590): called boinc_finish(0)

</stderr_txt>
]]>

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