Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:54:37 (20912): wrapper (7.7.26015): starting
23:54:37 (20912): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 23:54:37] Arguments: --nthreads 8
[2025-06-02 23:54:37] Threads: 8
[2025-06-02 23:54:37] Checking for CVMFS
[2025-06-02 23:54:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:54:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:54:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:54:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:54:39] 2.11.2.0 15878 30894 96284 146718 3 210 21422040 25165824 4587 130560 0 15606209 99.750 18856542 2119 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 23:54:39] CVMFS is ok
[2025-06-02 23:54:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:54:39] Checking for apptainer binary...
[2025-06-02 23:54:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:54:39] Running /usr/bin/apptainer --version
[2025-06-02 23:54:39] apptainer version 1.3.2-1.el7
[2025-06-02 23:54:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 00:25:15] cg-vwn433.simple-grid.lan
[2025-06-03 00:25:15] apptainer works
[2025-06-03 00:25:15] Set ATHENA_PROC_NUMBER=8
[2025-06-03 00:25:15] Set ATHENA_CORE_NUMBER=8
[2025-06-03 00:25:15] Starting ATLAS job with PandaID=6677382982
[2025-06-03 00:25:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:30:48]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:30:48] 2025-06-03 02:12:27,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:30:48] 2025-06-03 02:12:27,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:30:48] 2025-06-03 02:12:27,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:30:48] 2025-06-03 02:12:27,749 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:30:48] 2025-06-03 02:12:27,750 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 04:30:48] 2025-06-03 02:12:27,751 | INFO     | sum of deviations: 48591249826.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,751 | INFO     | mean x: 1748910207.5
[2025-06-03 04:30:48] 2025-06-03 02:12:27,752 | INFO     | mean y: 2461521.5904761907
[2025-06-03 04:30:48] 2025-06-03 02:12:27,752 | INFO     | -- intersect: -29591228615.901787
[2025-06-03 04:30:48] 2025-06-03 02:12:27,752 | INFO     | intersect: -29591228615.901787
[2025-06-03 04:30:48] 2025-06-03 02:12:27,752 | INFO     | chi2: 5.941018607456449
[2025-06-03 04:30:48] 2025-06-03 02:12:27,759 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,761 | INFO     | sum of deviations: 62038964443.99999
[2025-06-03 04:30:48] 2025-06-03 02:12:27,761 | INFO     | mean x: 1748910055.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,761 | INFO     | mean y: 2471552.795121951
[2025-06-03 04:30:48] 2025-06-03 02:12:27,761 | INFO     | -- intersect: -40614013956.58562
[2025-06-03 04:30:48] 2025-06-03 02:12:27,761 | INFO     | intersect: -40614013956.58562
[2025-06-03 04:30:48] 2025-06-03 02:12:27,761 | INFO     | chi2: 5.181578137135965
[2025-06-03 04:30:48] 2025-06-03 02:12:27,761 | INFO     | current chi2=5.181578137135965 (change=12.783001039036074 %)
[2025-06-03 04:30:48] 2025-06-03 02:12:27,762 | INFO     | right removable region: 204
[2025-06-03 04:30:48] 2025-06-03 02:12:27,762 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,763 | INFO     | sum of deviations: -20827918872.999996
[2025-06-03 04:30:48] 2025-06-03 02:12:27,764 | INFO     | mean x: 1748910360.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,764 | INFO     | mean y: 2514281.468292683
[2025-06-03 04:30:48] 2025-06-03 02:12:27,764 | INFO     | -- intersect: 13638412627.087107
[2025-06-03 04:30:48] 2025-06-03 02:12:27,764 | INFO     | intersect: 13638412627.087107
[2025-06-03 04:30:48] 2025-06-03 02:12:27,764 | INFO     | chi2: 1.5867144109179585
[2025-06-03 04:30:48] 2025-06-03 02:12:27,764 | INFO     | current chi2=1.5867144109179585 (change=73.29221610370811 %)
[2025-06-03 04:30:48] 2025-06-03 02:12:27,765 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,766 | INFO     | sum of deviations: -43504601041.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,766 | INFO     | mean x: 1748910512.5
[2025-06-03 04:30:48] 2025-06-03 02:12:27,766 | INFO     | mean y: 2532268.96
[2025-06-03 04:30:48] 2025-06-03 02:12:27,766 | INFO     | -- intersect: 30674753294.87936
[2025-06-03 04:30:48] 2025-06-03 02:12:27,767 | INFO     | intersect: 30674753294.87936
[2025-06-03 04:30:48] 2025-06-03 02:12:27,767 | INFO     | chi2: 0.9392285718509145
[2025-06-03 04:30:48] 2025-06-03 02:12:27,767 | INFO     | current chi2=0.9392285718509145 (change=40.806703122615204 %)
[2025-06-03 04:30:48] 2025-06-03 02:12:27,767 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,769 | INFO     | sum of deviations: -47955673929.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,769 | INFO     | mean x: 1748910665.0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,769 | INFO     | mean y: 2535967.194871795
[2025-06-03 04:30:48] 2025-06-03 02:12:27,769 | INFO     | -- intersect: 36481020537.06371
[2025-06-03 04:30:48] 2025-06-03 02:12:27,769 | INFO     | intersect: 36481020537.06371
[2025-06-03 04:30:48] 2025-06-03 02:12:27,770 | INFO     | chi2: 0.8845184711183286
[2025-06-03 04:30:48] 2025-06-03 02:12:27,770 | INFO     | current chi2=0.8845184711183286 (change=5.825003877892048 %)
[2025-06-03 04:30:48] 2025-06-03 02:12:27,770 | INFO     | left removable region: 30
[2025-06-03 04:30:48] 2025-06-03 02:12:27,770 | INFO     | sum of square deviations: 1633472487.5
[2025-06-03 04:30:48] 2025-06-03 02:12:27,771 | INFO     | sum of deviations: -27715156385.999996
[2025-06-03 04:30:48] 2025-06-03 02:12:27,771 | INFO     | mean x: 1748910939.5
[2025-06-03 04:30:48] 2025-06-03 02:12:27,771 | INFO     | mean y: 2543673.367816092
[2025-06-03 04:30:48] 2025-06-03 02:12:27,772 | INFO     | -- intersect: 29676346302.03234
[2025-06-03 04:30:48] 2025-06-03 02:12:27,772 | INFO     | intersect: 29676346302.03234
[2025-06-03 04:30:48] 2025-06-03 02:12:27,772 | INFO     | chi2: 0.049830904677807396
[2025-06-03 04:30:48] 2025-06-03 02:12:27,772 | INFO     | -- intersect: 29676346302.03234
[2025-06-03 04:30:48] 2025-06-03 02:12:27,772 | INFO     | current memory leak: -16.97 B/s (using 174 data points, chi2=0.05)
[2025-06-03 04:30:48] 2025-06-03 02:12:27,773 | INFO     | ..............................
[2025-06-03 04:30:48] 2025-06-03 02:12:27,773 | INFO     | . Timing measurements:
[2025-06-03 04:30:48] 2025-06-03 02:12:27,773 | INFO     | . get job = 0 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,773 | INFO     | . initial setup = 11 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,773 | INFO     | . payload setup = 187 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,774 | INFO     | . stage-in = 0 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,774 | INFO     | . payload execution = 12955 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,774 | INFO     | . stage-out = 3 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,774 | INFO     | . log creation = 0 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,774 | INFO     | ..............................
[2025-06-03 04:30:48] 2025-06-03 02:12:27,924 | INFO     | 
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | job summary report
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | --------------------------------------------------
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | PanDA job id: 6677382982
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | task id: 45006595
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | errors: (none)
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | pilot state: finished 
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | transexitcode: 0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | exeerrorcode: 0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | exeerrordiag: 
[2025-06-03 04:30:48] 2025-06-03 02:12:27,925 | INFO     | exitcode: 0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | exitmsg: OK
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | cpuconsumptiontime: 47776 s
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | nevents: 400
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | neventsw: 0
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | pid: 21392
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | pgrp: 21392
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | corecount: 8
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | event service: False
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 23: 2405233, 33: 2405261, 44: 2405317, 55: 2405473, 66: 2405501, 76: 2405529, 87: 2405585, 88: 2405819, 98: 2406127, 1
[2025-06-03 04:30:48] 2025-06-03 02:12:27,926 | INFO     | --------------------------------------------------
[2025-06-03 04:30:48] 2025-06-03 02:12:27,927 | INFO     | 
[2025-06-03 04:30:48] 2025-06-03 02:12:27,927 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 04:30:48] 2025-06-03 02:12:28,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:30:48] 2025-06-03 02:12:28,211 | INFO     | job 6677382982 has completed (purged errors)
[2025-06-03 04:30:48] 2025-06-03 02:12:28,212 | INFO     | overall cleanup function is called
[2025-06-03 04:30:48] 2025-06-03 02:12:29,228 | INFO     | --- collectZombieJob: --- 10, [21392]
[2025-06-03 04:30:48] 2025-06-03 02:12:29,229 | INFO     | zombie collector waiting for pid 21392
[2025-06-03 04:30:48] 2025-06-03 02:12:29,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:30:48] 2025-06-03 02:12:29,229 | INFO     | collected zombie processes
[2025-06-03 04:30:48] 2025-06-03 02:12:29,229 | INFO     | will attempt to kill all subprocesses of pid=21392
[2025-06-03 04:30:48] 2025-06-03 02:12:29,345 | INFO     | process IDs to be killed: [21392] (in reverse order)
[2025-06-03 04:30:48] 2025-06-03 02:12:30,077 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:30:48] 2025-06-03 02:12:30,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:30:48] 2025-06-03 02:12:30,081 | INFO     | did not find any defunct processes belonging to 21392
[2025-06-03 04:30:48] 2025-06-03 02:12:30,085 | INFO     | did not find any defunct processes belonging to 21392
[2025-06-03 04:30:48] 2025-06-03 02:12:30,085 | INFO     | ready for new job
[2025-06-03 04:30:48] 2025-06-03 02:12:30,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:30:48] 2025-06-03 02:12:30,088 | INFO     | **************************************
[2025-06-03 04:30:48] 2025-06-03 02:12:30,088 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:30:48] 2025-06-03 02:12:30,088 | INFO     | **************************************
[2025-06-03 04:30:48] 2025-06-03 02:12:30,088 | INFO     | 
[2025-06-03 04:30:48] 2025-06-03 02:12:30,089 | INFO     | pilot is running in a VM
[2025-06-03 04:30:48] 2025-06-03 02:12:30,089 | INFO     | architecture information:
[2025-06-03 04:30:48] 2025-06-03 02:12:30,107 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:30:48] 2025-06-03 02:12:30,373 | INFO     | cat /etc/os-release:
[2025-06-03 04:30:48] NAME="CentOS Linux"
[2025-06-03 04:30:48] VERSION="7 (Core)"
[2025-06-03 04:30:48] ID="centos"
[2025-06-03 04:30:48] ID_LIKE="rhel fedora"
[2025-06-03 04:30:48] VERSION_ID="7"
[2025-06-03 04:30:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:30:48] ANSI_COLOR="0;31"
[2025-06-03 04:30:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:30:48] HOME_URL="https://www.centos.org/"
[2025-06-03 04:30:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:30:48] 
[2025-06-03 04:30:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:30:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:30:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:30:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:30:48] 
[2025-06-03 04:30:48] 2025-06-03 02:12:30,374 | INFO     | **************************************
[2025-06-03 04:30:48] 2025-06-03 02:12:30,878 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 04:30:48] 2025-06-03 02:12:31,092 | INFO     | sufficient remaining disk space (496641245184 B)
[2025-06-03 04:30:48] 2025-06-03 02:12:31,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:30:48] 2025-06-03 02:12:31,093 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:30:48] 2025-06-03 02:12:31,093 | INFO     | update_server=False
[2025-06-03 04:30:48] 2025-06-03 02:12:31,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:30:48] 2025-06-03 02:12:31,095 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 04:30:48] 2025-06-03 02:12:31,095 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:30:48] 2025-06-03 02:12:31,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:30:48] 2025-06-03 02:12:31,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:30:48] 2025-06-03 02:12:31,227 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 04:30:48] 2025-06-03 02:12:31,228 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 04:30:48] 2025-06-03 02:12:31,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:30:48] 2025-06-03 02:12:31,228 | INFO     | will abort loop
[2025-06-03 04:30:48] 2025-06-03 02:12:31,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:30:48] 2025-06-03 02:12:31,478 | INFO     | all job control threads have been joined
[2025-06-03 04:30:48] 2025-06-03 02:12:31,676 | INFO     | all data control threads have been joined
[2025-06-03 04:30:48] 2025-06-03 02:12:31,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:30:48] 2025-06-03 02:12:32,100 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,234 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,450 | INFO     | all payload control threads have been joined
[2025-06-03 04:30:48] 2025-06-03 02:12:32,485 | INFO     | [job] control thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,502 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,682 | INFO     | [data] control thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,724 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,794 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,865 | INFO     | [job] validate thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:32,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:30:48] 2025-06-03 02:12:32,963 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:33,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:33,456 | INFO     | [payload] control thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:33,457 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:33,565 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:33,832 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:33,944 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:35,376 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:30:48] 2025-06-03 02:12:36,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918119737152)>', '<ExcThread(monitor, started 139917543859968)>']
[2025-06-03 04:30:48] 2025-06-03 02:12:37,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:30:48] 2025-06-03 02:12:37,133 | INFO     | [monitor] control thread has ended
[2025-06-03 04:30:48] 2025-06-03 02:12:41,812 | INFO     | all workflow threads have been joined
[2025-06-03 04:30:48] 2025-06-03 02:12:41,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:30:48] 2025-06-03 02:12:41,813 | INFO     | traces error code: 0
[2025-06-03 04:30:48] 2025-06-03 02:12:41,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:30:48] 2025-06-03 02:12:42,160 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:30:48] 2025-06-03 02:12:42,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:30:48] 2025-06-03 02:12:42,269 [wrapper] pilotpid: 10781
[2025-06-03 04:30:48] 2025-06-03 02:12:42,370 [wrapper] Pilot exit status: 0
[2025-06-03 04:30:48] 2025-06-03 02:12:42,798 [wrapper] pandaids: 6677382982
[2025-06-03 04:30:48] 2025-06-03 02:12:43,552 [wrapper] cleanup supervisor_pilot 16737 10782
[2025-06-03 04:30:48] 2025-06-03 02:12:43,706 [wrapper] Test setup, not cleaning
[2025-06-03 04:30:48] 2025-06-03 02:12:43,836 [wrapper] apfmon messages muted
[2025-06-03 04:30:48] 2025-06-03 02:12:43,944 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:30:48] 2025-06-03 02:12:44,008 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:30:48]  *** Error codes and diagnostics ***
[2025-06-03 04:30:48]     "exeErrorCode": 0,
[2025-06-03 04:30:48]     "exeErrorDiag": "",
[2025-06-03 04:30:48]     "pilotErrorCode": 0,
[2025-06-03 04:30:48]     "pilotErrorDiag": "",
[2025-06-03 04:30:48]  *** Listing of results directory ***
[2025-06-03 04:30:48] total 386580
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:11 pilot3.tar.gz
[2025-06-03 04:30:48] -rwx------. 1 boinc boinc     37140 Jun  2 18:14 runpilot2-wrapper.sh
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:14 queuedata.json
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:30:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:54 run_atlas
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:54 job.xml
[2025-06-03 04:30:48] -rw-r--r--. 2 boinc boinc 214597213 Jun  2 23:54 EVNT.45006593._000130.pool.root.1
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc      6392 Jun  2 23:54 init_data.xml
[2025-06-03 04:30:48] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:54 start_atlas.sh
[2025-06-03 04:30:48] drwxrwx--x. 2 boinc boinc        68 Jun  2 23:54 shared
[2025-06-03 04:30:48] -rw-r--r--. 2 boinc boinc    508874 Jun  2 23:54 input.tar.gz
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:54 boinc_lockfile
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc      2521 Jun  3 00:25 pandaJob.out
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc    987975 Jun  3 00:28 agis_schedconf.cvmfs.json
[2025-06-03 04:30:48] drwx------. 4 boinc boinc      4096 Jun  3 00:28 pilot3
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc 174381277 Jun  3 04:09 HITS.45006595._003246.pool.root.1
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc       531 Jun  3 04:09 boinc_task_state.xml
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc      1016 Jun  3 04:10 memory_monitor_summary.json
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc   1603667 Jun  3 04:10 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc    384984 Jun  3 04:10 log.45006595._003246.job.log.tgz.1
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc        95 Jun  3 04:12 pilot_heartbeat.json
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc      7694 Jun  3 04:12 heartbeat.json
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc      4725 Jun  3 04:12 pilotlog.txt
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc   1146635 Jun  3 04:12 log.45006595._003246.job.log.1
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc       357 Jun  3 04:12 output.list
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc       620 Jun  3 04:12 runtime_log
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc   1546240 Jun  3 04:12 result.tar.gz
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc      8659 Jun  3 04:12 runtime_log.err
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc       656 Jun  3 04:12 ldiKDmlyMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuIfKDmT41tnn.diag
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc      8192 Jun  3 04:30 boinc_mmap_file
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc        28 Jun  3 04:30 wrapper_checkpoint.txt
[2025-06-03 04:30:48] -rw-r--r--. 1 boinc boinc     20526 Jun  3 04:30 stderr.txt
[2025-06-03 04:30:48] HITS file was successfully produced:
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc 174381277 Jun  3 04:09 shared/HITS.pool.root.1
[2025-06-03 04:30:48]  *** Contents of shared directory: ***
[2025-06-03 04:30:48] total 381892
[2025-06-03 04:30:48] -rw-r--r--. 2 boinc boinc 214597213 Jun  2 23:54 ATLAS.root_0
[2025-06-03 04:30:48] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:54 start_atlas.sh
[2025-06-03 04:30:48] -rw-r--r--. 2 boinc boinc    508874 Jun  2 23:54 input.tar.gz
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc 174381277 Jun  3 04:09 HITS.pool.root.1
[2025-06-03 04:30:48] -rw-------. 1 boinc boinc   1546240 Jun  3 04:12 result.tar.gz
04:30:50 (20912): run_atlas exited; CPU time 47960.884761
04:30:50 (20912): called boinc_finish(0)

</stderr_txt>
]]>

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