Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 17:20:05 (17640): Detected: vboxwrapper 26206
2025-06-04 17:20:05 (17640): Detected: BOINC client v8.0.2
2025-06-04 17:20:06 (17640): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-04 17:20:06 (17640): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 17:20:07 (17640): Create VM. (boinc_21f47b8fbce0f5c5, slot#2)
2025-06-04 17:20:07 (17640): Setting Memory Size for VM. (4400MB)
2025-06-04 17:20:07 (17640): Setting CPU Count for VM. (4)
2025-06-04 17:20:08 (17640): Setting Chipset Options for VM.
2025-06-04 17:20:08 (17640): Setting Graphics Controller Options for VM.
2025-06-04 17:20:08 (17640): Setting Boot Options for VM.
2025-06-04 17:20:08 (17640): Setting Network Configuration for NAT.
2025-06-04 17:20:09 (17640): Enabling VM Network Access.
2025-06-04 17:20:09 (17640): Disabling USB Support for VM.
2025-06-04 17:20:09 (17640): Disabling COM Port Support for VM.
2025-06-04 17:20:09 (17640): Disabling LPT Port Support for VM.
2025-06-04 17:20:10 (17640): Disabling Audio Support for VM.
2025-06-04 17:20:10 (17640): Disabling Clipboard Support for VM.
2025-06-04 17:20:10 (17640): Disabling Drag and Drop Support for VM.
2025-06-04 17:20:10 (17640): Adding storage controller(s) to VM.
2025-06-04 17:20:11 (17640): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 17:20:12 (17640): Adding VirtualBox Guest Additions to VM.
2025-06-04 17:20:12 (17640): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 17:20:12 (17640): forwarding host port 50106 to guest port 80
2025-06-04 17:20:13 (17640): Enabling remote desktop for VM.
2025-06-04 17:20:13 (17640): Required extension pack not installed, remote desktop not enabled.
2025-06-04 17:20:13 (17640): Enabling shared directory for VM.
2025-06-04 17:20:13 (17640): Starting VM using VBoxManage interface. (boinc_21f47b8fbce0f5c5, slot#2)
2025-06-04 17:20:19 (17640): Successfully started VM. (PID = '3808')
2025-06-04 17:20:19 (17640): Reporting VM Process ID to BOINC.
2025-06-04 17:20:19 (17640): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-04 17:20:19 (17640): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 17:20:19 (17640): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 17:20:19 (17640): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 17:20:19 (17640): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 17:20:19 (17640): Detected: Web Application Enabled (http://localhost:50106)
2025-06-04 17:20:19 (17640): Preference change detected
2025-06-04 17:20:19 (17640): Setting CPU throttle for VM. (100%)
2025-06-04 17:20:20 (17640): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 17:20:21 (17640): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 17:20:21 (17640): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 17:20:23 (17640): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 17:20:23 (17640): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 17:20:23 (17640): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 17:20:29 (17640): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 17:20:29 (17640): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 17:20:33 (17640): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000101 main     Log opened 2025-06-04T17:20:30.968091000Z
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000162 main     OS Product: Linux
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000183 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000201 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000218 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000218 main     Process ID: 1299
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000219 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 17:20:33 (17640): Guest Log: 00:00:00.000956 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 17:20:33 (17640): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 17:20:33 (17640): Guest Log: [INFO] Mounting shared directory
2025-06-04 17:20:33 (17640): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 17:20:39 (17640): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 17:20:39 (17640): Guest Log: [INFO] Detected branch: prod
2025-06-04 17:20:40 (17640): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 17:20:40 (17640): Guest Log: Copying input files
2025-06-04 17:20:40 (17640): Guest Log: Copied input files into RunAtlas.
2025-06-04 17:20:40 (17640): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 17:20:40 (17640): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 17:20:40 (17640): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 17:20:40 (17640): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 17:20:43 (17640): Guest Log: 00:00:10.009830 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 064 579 000ns (GuestNow=1 749 050 442 905 599 000 ns GuestLast=1 749 057 630 970 178 000 ns fSetTimeLastLoop=true )
2025-06-04 17:20:49 (17640): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 17:20:50 (17640): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 17:20:50 (17640): Guest Log: 2.6.3.0 1578 0 32196 146786 4 1 3117617 4096000 0 65024 0 0 n/a 1 5 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 17:20:50 (17640): Guest Log: copied the webapp to /var/www
2025-06-04 17:20:50 (17640): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-04 17:20:50 (17640): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-04 17:20:51 (17640): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 17:20:51 (17640): Guest Log:  *** Starting ATLAS job. (PandaID=6677383013 taskID=45006595) ***
2025-06-04 19:00:12 (17640): Guest Log:  *** Job finished ***
2025-06-04 19:00:12 (17640): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 16:59:55,993 | INFO     | [data] queue_monitor thread has finished
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:01,331 | INFO     | job.realtimelogging is not enabled
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:02,333 | INFO     | [payload] run_realtimelog thread has finished
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:03,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872935790400)>', '<ExcThread(monitor, started 139872346023680)>']
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:04,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:04,399 | INFO     | [monitor] control thread has ended
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,712 | INFO     | all workflow threads have been joined
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,713 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,713 | INFO     | traces error code: 0
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,781 [wrapper] ==== pilot stdout END ====
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,784 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,786 [wrapper] pilotpid: 5906
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:08,789 [wrapper] Pilot exit status: 0
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:10,088 [wrapper] pandaids: 6677383013
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:10,135 [wrapper] cleanup supervisor_pilot   961 5907
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:10,137 [wrapper] Test setup, not cleaning
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:10,140 [wrapper] apfmon messages muted
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:10,143 [wrapper] ==== wrapper stdout END ====
2025-06-04 19:00:12 (17640): Guest Log: 2025-06-04 17:00:10,145 [wrapper] ==== wrapper stderr END ====
2025-06-04 19:00:12 (17640): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 19:00:12 (17640): Guest Log:     "exeErrorCode": 0,
2025-06-04 19:00:12 (17640): Guest Log:     "exeErrorDiag": "",
2025-06-04 19:00:12 (17640): Guest Log:     "pilotErrorCode": 0,
2025-06-04 19:00:12 (17640): Guest Log:     "pilotErrorDiag": "",
2025-06-04 19:00:12 (17640): Guest Log:  *** Listing of results directory ***
2025-06-04 19:00:12 (17640): Guest Log: total 185304
2025-06-04 19:00:12 (17640): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  2 16:11 pilot3.tar.gz
2025-06-04 19:00:12 (17640): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  2 16:14 runpilot2-wrapper.sh
2025-06-04 19:00:12 (17640): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  2 16:14 queuedata.json
2025-06-04 19:00:12 (17640): Guest Log: -rwxr-xr-x. 1 atlas atlas      8964 Jun  4 15:20 init_data.xml
2025-06-04 19:00:12 (17640): Guest Log: -rwxr-xr-x. 1 atlas atlas    508867 Jun  4 15:20 input.tar.gz
2025-06-04 19:00:12 (17640): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 15:20 start_atlas.sh
2025-06-04 19:00:12 (17640): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 15:20 EVNT.45006593._000131.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 19:00:12 (17640): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Jun  4 15:20 pandaJob.out
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas    990989 Jun  4 15:22 agis_schedconf.cvmfs.json
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 15:22 agis_ddmendpoints.agis.ALL.json
2025-06-04 19:00:12 (17640): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 15:23 pilot3
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas 184443305 Jun  4 16:59 HITS.45006595._003277.pool.root.1
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 16:59 pilot_heartbeat.json
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas      1031 Jun  4 16:59 memory_monitor_summary.json
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas    261893 Jun  4 16:59 log.45006595._003277.job.log.tgz.1
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas      7722 Jun  4 16:59 heartbeat.json
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas      4801 Jun  4 17:00 pilotlog.txt
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas    508728 Jun  4 17:00 log.45006595._003277.job.log.1
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 17:00 output.list
2025-06-04 19:00:12 (17640): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 17:00 runtime_log
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas    788480 Jun  4 17:00 result.tar.gz
2025-06-04 19:00:12 (17640): Guest Log: -rw-r--r--. 1 atlas atlas      8598 Jun  4 17:00 runtime_log.err
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas       654 Jun  4 17:00 JrILDmlyMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOJfKDmRUKxOm.diag
2025-06-04 19:00:12 (17640): Guest Log: Looking for outputfile HITS.45006595._003277.pool.root.1
2025-06-04 19:00:12 (17640): Guest Log: HITS file was successfully produced
2025-06-04 19:00:12 (17640): Guest Log: -rw-------. 1 atlas atlas 184443305 Jun  4 16:59 /home/atlas/RunAtlas/HITS.45006595._003277.pool.root.1
2025-06-04 19:00:13 (17640): Guest Log: Successfully finished the ATLAS job!
2025-06-04 19:00:13 (17640): Guest Log: Copying the results back to the shared directory!
2025-06-04 19:00:13 (17640): Guest Log:  *** Contents of shared directory: ***
2025-06-04 19:00:13 (17640): Guest Log: total 392180
2025-06-04 19:00:13 (17640): Guest Log: -rwxrwxrwx. 1 root root 215813148 Jun  4 15:20 ATLAS.root_0
2025-06-04 19:00:13 (17640): Guest Log: -rwxrwxrwx. 1 root root 184443305 Jun  4 17:00 HITS.pool.root.1
2025-06-04 19:00:13 (17640): Guest Log: -rwxrwxrwx. 1 root root      8964 Jun  4 15:20 init_data.xml
2025-06-04 19:00:13 (17640): Guest Log: -rwxrwxrwx. 1 root root    508867 Jun  2 17:17 input.tar.gz
2025-06-04 19:00:13 (17640): Guest Log: -rwxrwxrwx. 1 root root    788480 Jun  4 17:00 result.tar.gz
2025-06-04 19:00:13 (17640): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  2 17:17 start_atlas.sh
2025-06-04 19:00:13 (17640): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 19:00:13 (17640): VM Completion File Detected.
2025-06-04 19:00:13 (17640): Powering off VM.
2025-06-04 19:00:13 (17640): Successfully stopped VM.
2025-06-04 19:00:13 (17640): Deregistering VM. (boinc_21f47b8fbce0f5c5, slot#2)
2025-06-04 19:00:13 (17640): Removing network bandwidth throttle group from VM.
2025-06-04 19:00:14 (17640): Removing VM from VirtualBox.
19:00:19 (17640): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN