Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:52:48 (11324): wrapper (7.7.26015): starting
18:52:48 (11324): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 18:52:48] Arguments: --nthreads 8
[2025-06-02 18:52:48] Threads: 8
[2025-06-02 18:52:48] Checking for CVMFS
[2025-06-02 18:52:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:52:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:52:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:52:53] 2.11.2.0 21130 30581 91872 146713 2 16 12728858 25165824 4632 130560 0 15073108 99.780 18156524 2021 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 18:52:53] CVMFS is ok
[2025-06-02 18:52:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:52:53] Checking for apptainer binary...
[2025-06-02 18:52:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:52:53] Running /usr/bin/apptainer --version
[2025-06-02 18:52:53] apptainer version 1.3.2-1.el7
[2025-06-02 18:52:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 19:08:35] cg-vwn411.simple-grid.lan
[2025-06-02 19:08:35] apptainer works
[2025-06-02 19:08:35] Set ATHENA_PROC_NUMBER=8
[2025-06-02 19:08:35] Set ATHENA_CORE_NUMBER=8
[2025-06-02 19:08:35] Starting ATLAS job with PandaID=6677382380
[2025-06-02 19:08:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 22:54:08]  *** The last 200 lines of the pilot log: ***
[2025-06-02 22:54:08] 2025-06-02 20:53:48,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 22:54:08] 2025-06-02 20:53:48,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 22:54:08] 2025-06-02 20:53:48,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 22:54:08] 2025-06-02 20:53:48,101 | INFO     | fitting pss+swap vs Time
[2025-06-02 22:54:08] 2025-06-02 20:53:48,102 | INFO     | sum of square deviations: 2871616632.5
[2025-06-02 22:54:08] 2025-06-02 20:53:48,103 | INFO     | sum of deviations: 111147851028.5
[2025-06-02 22:54:08] 2025-06-02 20:53:48,104 | INFO     | mean x: 1748891202.5
[2025-06-02 22:54:08] 2025-06-02 20:53:48,104 | INFO     | mean y: 2395929.9571428574
[2025-06-02 22:54:08] 2025-06-02 20:53:48,104 | INFO     | -- intersect: -67689613038.27835
[2025-06-02 22:54:08] 2025-06-02 20:53:48,104 | INFO     | intersect: -67689613038.27835
[2025-06-02 22:54:08] 2025-06-02 20:53:48,104 | INFO     | chi2: 8.397245622995968
[2025-06-02 22:54:08] 2025-06-02 20:53:48,105 | INFO     | sum of square deviations: 2671343110.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,106 | INFO     | sum of deviations: 122237828385.99998
[2025-06-02 22:54:08] 2025-06-02 20:53:48,107 | INFO     | mean x: 1748891050.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,107 | INFO     | mean y: 2404168.2682926827
[2025-06-02 22:54:08] 2025-06-02 20:53:48,107 | INFO     | -- intersect: -80024995994.38297
[2025-06-02 22:54:08] 2025-06-02 20:53:48,107 | INFO     | intersect: -80024995994.38297
[2025-06-02 22:54:08] 2025-06-02 20:53:48,107 | INFO     | chi2: 7.6893488320329855
[2025-06-02 22:54:08] 2025-06-02 20:53:48,107 | INFO     | current chi2=7.6893488320329855 (change=8.430106998709165 %)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,108 | INFO     | right removable region: 204
[2025-06-02 22:54:08] 2025-06-02 20:53:48,108 | INFO     | sum of square deviations: 2671343110.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,110 | INFO     | sum of deviations: 37658833852.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,110 | INFO     | mean x: 1748891355.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,110 | INFO     | mean y: 2451859.975609756
[2025-06-02 22:54:08] 2025-06-02 20:53:48,110 | INFO     | -- intersect: -24652265355.71899
[2025-06-02 22:54:08] 2025-06-02 20:53:48,110 | INFO     | intersect: -24652265355.71899
[2025-06-02 22:54:08] 2025-06-02 20:53:48,111 | INFO     | chi2: 3.133863725028893
[2025-06-02 22:54:08] 2025-06-02 20:53:48,111 | INFO     | current chi2=3.133863725028893 (change=62.6798611624892 %)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,111 | INFO     | sum of square deviations: 2480604650.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,113 | INFO     | sum of deviations: -9362346977.999998
[2025-06-02 22:54:08] 2025-06-02 20:53:48,113 | INFO     | mean x: 1748891507.5
[2025-06-02 22:54:08] 2025-06-02 20:53:48,113 | INFO     | mean y: 2489290.57
[2025-06-02 22:54:08] 2025-06-02 20:53:48,113 | INFO     | -- intersect: 6603190099.581418
[2025-06-02 22:54:08] 2025-06-02 20:53:48,113 | INFO     | intersect: 6603190099.581418
[2025-06-02 22:54:08] 2025-06-02 20:53:48,113 | INFO     | chi2: 0.9427952373971948
[2025-06-02 22:54:08] 2025-06-02 20:53:48,114 | INFO     | current chi2=0.9427952373971948 (change=69.91588275305422 %)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,114 | INFO     | sum of square deviations: 2299168690.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,115 | INFO     | sum of deviations: -19282908799.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,115 | INFO     | mean x: 1748891660.0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,116 | INFO     | mean y: 2497575.405128205
[2025-06-02 22:54:08] 2025-06-02 20:53:48,116 | INFO     | -- intersect: 14670285339.647743
[2025-06-02 22:54:08] 2025-06-02 20:53:48,116 | INFO     | intersect: 14670285339.647743
[2025-06-02 22:54:08] 2025-06-02 20:53:48,116 | INFO     | chi2: 0.8243637216221968
[2025-06-02 22:54:08] 2025-06-02 20:53:48,116 | INFO     | current chi2=0.8243637216221968 (change=12.56174310998385 %)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,116 | INFO     | left removable region: 30
[2025-06-02 22:54:08] 2025-06-02 20:53:48,117 | INFO     | sum of square deviations: 1633472487.5
[2025-06-02 22:54:08] 2025-06-02 20:53:48,118 | INFO     | sum of deviations: -4634676788.000001
[2025-06-02 22:54:08] 2025-06-02 20:53:48,118 | INFO     | mean x: 1748891934.5
[2025-06-02 22:54:08] 2025-06-02 20:53:48,118 | INFO     | mean y: 2507796.9195402297
[2025-06-02 22:54:08] 2025-06-02 20:53:48,118 | INFO     | -- intersect: 4964665969.508638
[2025-06-02 22:54:08] 2025-06-02 20:53:48,119 | INFO     | intersect: 4964665969.508638
[2025-06-02 22:54:08] 2025-06-02 20:53:48,119 | INFO     | chi2: 0.014463166155249315
[2025-06-02 22:54:08] 2025-06-02 20:53:48,119 | INFO     | -- intersect: 4964665969.508638
[2025-06-02 22:54:08] 2025-06-02 20:53:48,119 | INFO     | current memory leak: -2.84 B/s (using 174 data points, chi2=0.01)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,120 | INFO     | ..............................
[2025-06-02 22:54:08] 2025-06-02 20:53:48,120 | INFO     | . Timing measurements:
[2025-06-02 22:54:08] 2025-06-02 20:53:48,120 | INFO     | . get job = 0 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,120 | INFO     | . initial setup = 11 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,121 | INFO     | . payload setup = 166 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,121 | INFO     | . stage-in = 0 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,121 | INFO     | . payload execution = 12940 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,121 | INFO     | . stage-out = 1 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,121 | INFO     | . log creation = 0 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,121 | INFO     | ..............................
[2025-06-02 22:54:08] 2025-06-02 20:53:48,247 | INFO     | 
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | job summary report
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | --------------------------------------------------
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | PanDA job id: 6677382380
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | task id: 45006595
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | errors: (none)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | pilot state: finished 
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | transexitcode: 0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | exeerrorcode: 0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | exeerrordiag: 
[2025-06-02 22:54:08] 2025-06-02 20:53:48,248 | INFO     | exitcode: 0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | exitmsg: OK
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | cpuconsumptiontime: 47635 s
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | nevents: 400
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | neventsw: 0
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | pid: 5998
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | pgrp: 5998
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | corecount: 8
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | event service: False
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | sizes: {0: 2404950, 1: 2405205, 12: 2405205, 23: 2405233, 34: 2405261, 44: 2405289, 55: 2405445, 66: 2405473, 77: 2405501, 87: 2405557, 89: 2405791, 98: 2406099, 1
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | --------------------------------------------------
[2025-06-02 22:54:08] 2025-06-02 20:53:48,249 | INFO     | 
[2025-06-02 22:54:08] 2025-06-02 20:53:48,250 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-02 22:54:08] 2025-06-02 20:53:48,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 22:54:08] 2025-06-02 20:53:48,282 | INFO     | job 6677382380 has completed (purged errors)
[2025-06-02 22:54:08] 2025-06-02 20:53:48,282 | INFO     | overall cleanup function is called
[2025-06-02 22:54:08] 2025-06-02 20:53:49,291 | INFO     | --- collectZombieJob: --- 10, [5998]
[2025-06-02 22:54:08] 2025-06-02 20:53:49,292 | INFO     | zombie collector waiting for pid 5998
[2025-06-02 22:54:08] 2025-06-02 20:53:49,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 22:54:08] 2025-06-02 20:53:49,292 | INFO     | collected zombie processes
[2025-06-02 22:54:08] 2025-06-02 20:53:49,292 | INFO     | will attempt to kill all subprocesses of pid=5998
[2025-06-02 22:54:08] 2025-06-02 20:53:49,402 | INFO     | process IDs to be killed: [5998] (in reverse order)
[2025-06-02 22:54:08] 2025-06-02 20:53:49,564 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 22:54:08] 2025-06-02 20:53:49,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 22:54:08] 2025-06-02 20:53:49,568 | INFO     | did not find any defunct processes belonging to 5998
[2025-06-02 22:54:08] 2025-06-02 20:53:49,571 | INFO     | did not find any defunct processes belonging to 5998
[2025-06-02 22:54:08] 2025-06-02 20:53:49,571 | INFO     | ready for new job
[2025-06-02 22:54:08] 2025-06-02 20:53:49,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 22:54:08] 2025-06-02 20:53:49,574 | INFO     | **************************************
[2025-06-02 22:54:08] 2025-06-02 20:53:49,574 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 22:54:08] 2025-06-02 20:53:49,574 | INFO     | **************************************
[2025-06-02 22:54:08] 2025-06-02 20:53:49,574 | INFO     | 
[2025-06-02 22:54:08] 2025-06-02 20:53:49,575 | INFO     | pilot is running in a VM
[2025-06-02 22:54:08] 2025-06-02 20:53:49,575 | INFO     | architecture information:
[2025-06-02 22:54:08] 2025-06-02 20:53:49,575 | INFO     | executing command: cat /etc/os-release
[2025-06-02 22:54:08] 2025-06-02 20:53:49,600 | INFO     | cat /etc/os-release:
[2025-06-02 22:54:08] NAME="CentOS Linux"
[2025-06-02 22:54:08] VERSION="7 (Core)"
[2025-06-02 22:54:08] ID="centos"
[2025-06-02 22:54:08] ID_LIKE="rhel fedora"
[2025-06-02 22:54:08] VERSION_ID="7"
[2025-06-02 22:54:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 22:54:08] ANSI_COLOR="0;31"
[2025-06-02 22:54:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 22:54:08] HOME_URL="https://www.centos.org/"
[2025-06-02 22:54:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 22:54:08] 
[2025-06-02 22:54:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 22:54:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 22:54:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 22:54:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 22:54:08] 
[2025-06-02 22:54:08] 2025-06-02 20:53:49,601 | INFO     | **************************************
[2025-06-02 22:54:08] 2025-06-02 20:53:50,105 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-02 22:54:08] 2025-06-02 20:53:50,127 | INFO     | sufficient remaining disk space (496645439488 B)
[2025-06-02 22:54:08] 2025-06-02 20:53:50,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 22:54:08] 2025-06-02 20:53:50,127 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 22:54:08] 2025-06-02 20:53:50,127 | INFO     | update_server=False
[2025-06-02 22:54:08] 2025-06-02 20:53:50,127 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 22:54:08] 2025-06-02 20:53:50,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 22:54:08] 2025-06-02 20:53:50,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:54:08] 2025-06-02 20:53:50,187 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 22:54:08] 2025-06-02 20:53:50,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 22:54:08] 2025-06-02 20:53:50,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 22:54:08] 2025-06-02 20:53:50,322 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 22:54:08] 2025-06-02 20:53:50,323 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 22:54:08] 2025-06-02 20:53:50,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:54:08] 2025-06-02 20:53:50,323 | INFO     | will abort loop
[2025-06-02 22:54:08] 2025-06-02 20:53:50,537 | INFO     | all data control threads have been joined
[2025-06-02 22:54:08] 2025-06-02 20:53:50,621 | INFO     | all payload control threads have been joined
[2025-06-02 22:54:08] 2025-06-02 20:53:51,131 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,133 | INFO     | [job] retrieve thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,137 | INFO     | [job] queue monitor thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,146 | INFO     | [data] copytool_in thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,149 | INFO     | [payload] failed_post thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,272 | INFO     | [job] validate thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,288 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,328 | INFO     | [job] job monitor thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,543 | INFO     | [data] control thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,627 | INFO     | [payload] control thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:51,726 | INFO     | all job control threads have been joined
[2025-06-02 22:54:08] 2025-06-02 20:53:52,134 | INFO     | [data] copytool_out thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:52,597 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:52,721 | INFO     | [payload] validate_post thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:52,732 | INFO     | [job] control thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:53:53,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 22:54:08] 2025-06-02 20:53:57,324 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:54:00,983 | INFO     | job.realtimelogging is not enabled
[2025-06-02 22:54:08] 2025-06-02 20:54:01,989 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 22:54:08] 2025-06-02 20:54:02,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703284713280)>', '<ExcThread(monitor, started 139702401234688)>']
[2025-06-02 22:54:08] 2025-06-02 20:54:03,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 22:54:08] 2025-06-02 20:54:03,263 | INFO     | [monitor] control thread has ended
[2025-06-02 22:54:08] 2025-06-02 20:54:07,521 | INFO     | all workflow threads have been joined
[2025-06-02 22:54:08] 2025-06-02 20:54:07,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 22:54:08] 2025-06-02 20:54:07,522 | INFO     | traces error code: 0
[2025-06-02 22:54:08] 2025-06-02 20:54:07,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 22:54:08] 2025-06-02 20:54:07,734 [wrapper] ==== pilot stdout END ====
[2025-06-02 22:54:08] 2025-06-02 20:54:07,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 22:54:08] 2025-06-02 20:54:07,747 [wrapper] pilotpid: 27896
[2025-06-02 22:54:08] 2025-06-02 20:54:07,750 [wrapper] Pilot exit status: 0
[2025-06-02 22:54:08] 2025-06-02 20:54:07,769 [wrapper] pandaids: 6677382380
[2025-06-02 22:54:08] 2025-06-02 20:54:07,821 [wrapper] cleanup supervisor_pilot  1160 27897
[2025-06-02 22:54:08] 2025-06-02 20:54:07,829 [wrapper] Test setup, not cleaning
[2025-06-02 22:54:08] 2025-06-02 20:54:07,852 [wrapper] apfmon messages muted
[2025-06-02 22:54:08] 2025-06-02 20:54:07,856 [wrapper] ==== wrapper stdout END ====
[2025-06-02 22:54:08] 2025-06-02 20:54:07,859 [wrapper] ==== wrapper stderr END ====
[2025-06-02 22:54:08]  *** Error codes and diagnostics ***
[2025-06-02 22:54:08]     "exeErrorCode": 0,
[2025-06-02 22:54:08]     "exeErrorDiag": "",
[2025-06-02 22:54:08]     "pilotErrorCode": 0,
[2025-06-02 22:54:08]     "pilotErrorDiag": "",
[2025-06-02 22:54:08]  *** Listing of results directory ***
[2025-06-02 22:54:08] total 388208
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:59 queuedata.json
[2025-06-02 22:54:08] -rwx------. 1 boinc boinc     37140 Jun  2 18:00 runpilot2-wrapper.sh
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 22:54:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:52 run_atlas
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:52 job.xml
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc      6392 Jun  2 18:52 init_data.xml
[2025-06-02 22:54:08] -rw-r--r--. 2 boinc boinc 213560472 Jun  2 18:52 EVNT.45006593._000123.pool.root.1
[2025-06-02 22:54:08] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:52 start_atlas.sh
[2025-06-02 22:54:08] drwxrwx--x. 2 boinc boinc        68 Jun  2 18:52 shared
[2025-06-02 22:54:08] -rw-r--r--. 2 boinc boinc    508879 Jun  2 18:52 input.tar.gz
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:52 boinc_lockfile
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc      2521 Jun  2 19:08 pandaJob.out
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc    988298 Jun  2 19:11 agis_schedconf.cvmfs.json
[2025-06-02 22:54:08] drwx------. 4 boinc boinc      4096 Jun  2 19:12 pilot3
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc 177127799 Jun  2 22:52 HITS.45006595._003060.pool.root.1
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc        95 Jun  2 22:52 pilot_heartbeat.json
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc       531 Jun  2 22:53 boinc_task_state.xml
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc      1016 Jun  2 22:53 memory_monitor_summary.json
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc   1603667 Jun  2 22:53 agis_ddmendpoints.agis.ALL.json
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc    370883 Jun  2 22:53 log.45006595._003060.job.log.tgz.1
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc      7691 Jun  2 22:53 heartbeat.json
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc      8192 Jun  2 22:53 boinc_mmap_file
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc        28 Jun  2 22:53 wrapper_checkpoint.txt
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc      4674 Jun  2 22:54 pilotlog.txt
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc   1135302 Jun  2 22:54 log.45006595._003060.job.log.1
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc       357 Jun  2 22:54 output.list
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc       620 Jun  2 22:54 runtime_log
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc   1525760 Jun  2 22:54 result.tar.gz
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc      8659 Jun  2 22:54 runtime_log.err
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc       657 Jun  2 22:54 CjqMDmilMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5EfKDm1mbRLo.diag
[2025-06-02 22:54:08] -rw-r--r--. 1 boinc boinc     20463 Jun  2 22:54 stderr.txt
[2025-06-02 22:54:08] HITS file was successfully produced:
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc 177127799 Jun  2 22:52 shared/HITS.pool.root.1
[2025-06-02 22:54:08]  *** Contents of shared directory: ***
[2025-06-02 22:54:08] total 383544
[2025-06-02 22:54:08] -rw-r--r--. 2 boinc boinc 213560472 Jun  2 18:52 ATLAS.root_0
[2025-06-02 22:54:08] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:52 start_atlas.sh
[2025-06-02 22:54:08] -rw-r--r--. 2 boinc boinc    508879 Jun  2 18:52 input.tar.gz
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc 177127799 Jun  2 22:52 HITS.pool.root.1
[2025-06-02 22:54:08] -rw-------. 1 boinc boinc   1525760 Jun  2 22:54 result.tar.gz
22:54:09 (11324): run_atlas exited; CPU time 47788.385252
22:54:09 (11324): called boinc_finish(0)

</stderr_txt>
]]>

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