Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:37 (14843): wrapper (7.7.26015): starting
22:52:37 (14843): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 22:52:37] Arguments: --nthreads 8
[2025-06-02 22:52:37] Threads: 8
[2025-06-02 22:52:37] Checking for CVMFS
[2025-06-02 22:52:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 22:52:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 22:52:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 22:52:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 22:52:40] 2.11.2.0 6418 30845 93204 146718 1 59 19419190 25165825 4660 130560 0 15797164 99.736 19273803 2145 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 22:52:40] CVMFS is ok
[2025-06-02 22:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 22:52:40] Checking for apptainer binary...
[2025-06-02 22:52:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 22:52:40] Running /usr/bin/apptainer --version
[2025-06-02 22:52:40] apptainer version 1.3.2-1.el7
[2025-06-02 22:52:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:55:31] cg-vwn357.simple-grid.lan
[2025-06-02 22:55:31] apptainer works
[2025-06-02 22:55:31] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:55:31] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:55:31] Starting ATLAS job with PandaID=6677382279
[2025-06-02 22:55:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:58:47]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:58:47] 2025-06-03 00:35:44,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:58:47] 2025-06-03 00:35:46,576 | INFO     | monitor loop #925: job 0:6677382279 is in state 'finished'
[2025-06-03 02:58:47] 2025-06-03 00:35:46,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,096 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 02:58:47] 2025-06-03 00:35:48,096 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6677382279/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,097 | INFO     | extracted standard info from prmon json
[2025-06-03 02:58:47] 2025-06-03 00:35:48,097 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:58:47] 2025-06-03 00:35:48,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:58:47] 2025-06-03 00:35:48,098 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:58:47] 2025-06-03 00:35:48,098 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:58:47] 2025-06-03 00:35:48,103 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:58:47] 2025-06-03 00:35:48,104 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 02:58:47] 2025-06-03 00:35:48,105 | INFO     | sum of deviations: -41911125246.99999
[2025-06-03 02:58:47] 2025-06-03 00:35:48,106 | INFO     | mean x: 1748904302.5
[2025-06-03 02:58:47] 2025-06-03 00:35:48,106 | INFO     | mean y: 2597942.663551402
[2025-06-03 02:58:47] 2025-06-03 00:35:48,106 | INFO     | -- intersect: 24123031319.35894
[2025-06-03 02:58:47] 2025-06-03 00:35:48,106 | INFO     | intersect: 24123031319.35894
[2025-06-03 02:58:47] 2025-06-03 00:35:48,107 | INFO     | chi2: 2.034158496933778
[2025-06-03 02:58:47] 2025-06-03 00:35:48,107 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,109 | INFO     | sum of deviations: -39030941133.99999
[2025-06-03 02:58:47] 2025-06-03 00:35:48,109 | INFO     | mean x: 1748904150.0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,109 | INFO     | mean y: 2600055.2440191386
[2025-06-03 02:58:47] 2025-06-03 00:35:48,112 | INFO     | -- intersect: 24116513174.917698
[2025-06-03 02:58:47] 2025-06-03 00:35:48,113 | INFO     | intersect: 24116513174.917698
[2025-06-03 02:58:47] 2025-06-03 00:35:48,113 | INFO     | chi2: 2.0341450527506137
[2025-06-03 02:58:47] 2025-06-03 00:35:48,113 | INFO     | current chi2=2.0341450527506137 (change=0.0006609211221413622 %)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,113 | INFO     | right removable region: 208
[2025-06-03 02:58:47] 2025-06-03 00:35:48,114 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,115 | INFO     | sum of deviations: -82664180378.00009
[2025-06-03 02:58:47] 2025-06-03 00:35:48,116 | INFO     | mean x: 1748904455.0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,116 | INFO     | mean y: 2627571.8038277514
[2025-06-03 02:58:47] 2025-06-03 00:35:48,116 | INFO     | -- intersect: 51073832965.798775
[2025-06-03 02:58:47] 2025-06-03 00:35:48,116 | INFO     | intersect: 51073832965.798775
[2025-06-03 02:58:47] 2025-06-03 00:35:48,116 | INFO     | chi2: 0.22807696410365372
[2025-06-03 02:58:47] 2025-06-03 00:35:48,117 | INFO     | current chi2=0.22807696410365372 (change=88.78765030122041 %)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,117 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,119 | INFO     | sum of deviations: -84100296576.5
[2025-06-03 02:58:47] 2025-06-03 00:35:48,119 | INFO     | mean x: 1748904607.5
[2025-06-03 02:58:47] 2025-06-03 00:35:48,119 | INFO     | mean y: 2628635.279411765
[2025-06-03 02:58:47] 2025-06-03 00:35:48,119 | INFO     | -- intersect: 55876036234.96636
[2025-06-03 02:58:47] 2025-06-03 00:35:48,119 | INFO     | intersect: 55876036234.96636
[2025-06-03 02:58:47] 2025-06-03 00:35:48,123 | INFO     | chi2: 0.17946676202186088
[2025-06-03 02:58:47] 2025-06-03 00:35:48,123 | INFO     | current chi2=0.17946676202186088 (change=21.313069591587976 %)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,123 | INFO     | left removable region: 20
[2025-06-03 02:58:47] 2025-06-03 00:35:48,124 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,125 | INFO     | sum of deviations: -73310089384.00003
[2025-06-03 02:58:47] 2025-06-03 00:35:48,125 | INFO     | mean x: 1748904729.5
[2025-06-03 02:58:47] 2025-06-03 00:35:48,125 | INFO     | mean y: 2626661.234042553
[2025-06-03 02:58:47] 2025-06-03 00:35:48,126 | INFO     | -- intersect: 62231253428.21469
[2025-06-03 02:58:47] 2025-06-03 00:35:48,126 | INFO     | intersect: 62231253428.21469
[2025-06-03 02:58:47] 2025-06-03 00:35:48,126 | INFO     | chi2: 0.16185501394287868
[2025-06-03 02:58:47] 2025-06-03 00:35:48,126 | INFO     | -- intersect: 62231253428.21469
[2025-06-03 02:58:47] 2025-06-03 00:35:48,126 | INFO     | current memory leak: -35.58 B/s (using 188 data points, chi2=0.16)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,127 | INFO     | ..............................
[2025-06-03 02:58:47] 2025-06-03 00:35:48,127 | INFO     | . Timing measurements:
[2025-06-03 02:58:47] 2025-06-03 00:35:48,128 | INFO     | . get job = 0 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,128 | INFO     | . initial setup = 2 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,128 | INFO     | . payload setup = 12 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,128 | INFO     | . stage-in = 0 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,128 | INFO     | . payload execution = 13072 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,128 | INFO     | . stage-out = 3 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,128 | INFO     | . log creation = 1 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,131 | INFO     | ..............................
[2025-06-03 02:58:47] 2025-06-03 00:35:48,270 | INFO     | 
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | job summary report
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | --------------------------------------------------
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | PanDA job id: 6677382279
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | task id: 45006595
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | errors: (none)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | pilot state: finished 
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | transexitcode: 0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | exeerrorcode: 0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | exeerrordiag: 
[2025-06-03 02:58:47] 2025-06-03 00:35:48,271 | INFO     | exitcode: 0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | exitmsg: OK
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | cpuconsumptiontime: 48419 s
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | nevents: 400
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | neventsw: 0
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | pid: 27082
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | pgrp: 27082
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | corecount: 8
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | event service: False
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | sizes: {0: 2405008, 1: 2405207, 10: 2405413, 12: 2405441, 13089: 2434991, 13090: 2434990, 13094: 2444173, 13177: 2444287}
[2025-06-03 02:58:47] 2025-06-03 00:35:48,272 | INFO     | --------------------------------------------------
[2025-06-03 02:58:47] 2025-06-03 00:35:48,273 | INFO     | 
[2025-06-03 02:58:47] 2025-06-03 00:35:48,273 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-03 02:58:47] 2025-06-03 00:35:48,706 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,706 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:58:47] 2025-06-03 00:35:48,709 | INFO     | job 6677382279 has completed (purged errors)
[2025-06-03 02:58:47] 2025-06-03 00:35:48,709 | INFO     | overall cleanup function is called
[2025-06-03 02:58:47] 2025-06-03 00:35:49,721 | INFO     | --- collectZombieJob: --- 10, [27082]
[2025-06-03 02:58:47] 2025-06-03 00:35:49,722 | INFO     | zombie collector waiting for pid 27082
[2025-06-03 02:58:47] 2025-06-03 00:35:49,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:58:47] 2025-06-03 00:35:49,722 | INFO     | collected zombie processes
[2025-06-03 02:58:47] 2025-06-03 00:35:49,722 | INFO     | will attempt to kill all subprocesses of pid=27082
[2025-06-03 02:58:47] 2025-06-03 00:35:49,836 | INFO     | process IDs to be killed: [27082] (in reverse order)
[2025-06-03 02:58:47] 2025-06-03 00:35:50,719 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:58:47] 2025-06-03 00:35:50,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:58:47] 2025-06-03 00:35:50,724 | INFO     | did not find any defunct processes belonging to 27082
[2025-06-03 02:58:47] 2025-06-03 00:35:50,727 | INFO     | did not find any defunct processes belonging to 27082
[2025-06-03 02:58:47] 2025-06-03 00:35:50,728 | INFO     | ready for new job
[2025-06-03 02:58:47] 2025-06-03 00:35:50,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:58:47] 2025-06-03 00:35:50,730 | INFO     | **************************************
[2025-06-03 02:58:47] 2025-06-03 00:35:50,731 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:58:47] 2025-06-03 00:35:50,731 | INFO     | **************************************
[2025-06-03 02:58:47] 2025-06-03 00:35:50,731 | INFO     | 
[2025-06-03 02:58:47] 2025-06-03 00:35:50,732 | INFO     | pilot is running in a VM
[2025-06-03 02:58:47] 2025-06-03 00:35:50,732 | INFO     | architecture information:
[2025-06-03 02:58:47] 2025-06-03 00:35:50,736 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:58:47] 2025-06-03 00:35:50,849 | INFO     | cat /etc/os-release:
[2025-06-03 02:58:47] NAME="CentOS Linux"
[2025-06-03 02:58:47] VERSION="7 (Core)"
[2025-06-03 02:58:47] ID="centos"
[2025-06-03 02:58:47] ID_LIKE="rhel fedora"
[2025-06-03 02:58:47] VERSION_ID="7"
[2025-06-03 02:58:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:58:47] ANSI_COLOR="0;31"
[2025-06-03 02:58:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:58:47] HOME_URL="https://www.centos.org/"
[2025-06-03 02:58:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:58:47] 
[2025-06-03 02:58:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:58:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:58:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:58:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:58:47] 
[2025-06-03 02:58:47] 2025-06-03 00:35:50,849 | INFO     | **************************************
[2025-06-03 02:58:47] 2025-06-03 00:35:51,353 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-03 02:58:47] 2025-06-03 00:35:51,483 | INFO     | sufficient remaining disk space (496796434432 B)
[2025-06-03 02:58:47] 2025-06-03 00:35:51,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:58:47] 2025-06-03 00:35:51,483 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:58:47] 2025-06-03 00:35:51,483 | INFO     | update_server=False
[2025-06-03 02:58:47] 2025-06-03 00:35:51,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:58:47] 2025-06-03 00:35:51,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:58:47] 2025-06-03 00:35:51,490 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 02:58:47] 2025-06-03 00:35:51,491 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:58:47] 2025-06-03 00:35:51,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:58:47] 2025-06-03 00:35:51,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:58:47] 2025-06-03 00:35:51,592 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 02:58:47] 2025-06-03 00:35:51,593 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 02:58:47] 2025-06-03 00:35:51,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:58:47] 2025-06-03 00:35:51,593 | INFO     | will abort loop
[2025-06-03 02:58:47] 2025-06-03 00:35:51,840 | INFO     | all payload control threads have been joined
[2025-06-03 02:58:47] 2025-06-03 00:35:52,331 | INFO     | all data control threads have been joined
[2025-06-03 02:58:47] 2025-06-03 00:35:52,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:58:47] 2025-06-03 00:35:52,490 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:52,600 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:52,628 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:52,847 | INFO     | [payload] control thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,005 | INFO     | all job control threads have been joined
[2025-06-03 02:58:47] 2025-06-03 00:35:53,166 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:58:47] 2025-06-03 00:35:53,338 | INFO     | [data] control thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,372 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,414 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,475 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,491 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,888 | INFO     | [job] validate thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:53,911 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:54,011 | INFO     | [job] control thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:54,290 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:35:56,398 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:36:01,675 | INFO     | job.realtimelogging is not enabled
[2025-06-03 02:58:47] 2025-06-03 00:36:02,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:58:47] 2025-06-03 00:36:04,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445768046400)>', '<ExcThread(monitor, started 140445329897216)>']
[2025-06-03 02:58:47] 2025-06-03 00:36:05,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:58:47] 2025-06-03 00:36:05,576 | INFO     | [monitor] control thread has ended
[2025-06-03 02:58:47] 2025-06-03 00:36:09,792 | INFO     | all workflow threads have been joined
[2025-06-03 02:58:47] 2025-06-03 00:36:09,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:58:47] 2025-06-03 00:36:09,793 | INFO     | traces error code: 0
[2025-06-03 02:58:47] 2025-06-03 00:36:09,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:58:47] 2025-06-03 00:36:10,275 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:58:47] 2025-06-03 00:36:10,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:58:47] 2025-06-03 00:36:10,511 [wrapper] pilotpid: 20571
[2025-06-03 02:58:47] 2025-06-03 00:36:10,624 [wrapper] Pilot exit status: 0
[2025-06-03 02:58:47] 2025-06-03 00:36:11,315 [wrapper] pandaids: 6677382279
[2025-06-03 02:58:47] 2025-06-03 00:36:12,177 [wrapper] cleanup supervisor_pilot 13868 20572
[2025-06-03 02:58:47] 2025-06-03 00:36:12,250 [wrapper] Test setup, not cleaning
[2025-06-03 02:58:47] 2025-06-03 00:36:12,386 [wrapper] apfmon messages muted
[2025-06-03 02:58:47] 2025-06-03 00:36:12,495 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:58:47] 2025-06-03 00:36:12,571 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:58:47]  *** Error codes and diagnostics ***
[2025-06-03 02:58:47]     "exeErrorCode": 0,
[2025-06-03 02:58:47]     "exeErrorDiag": "",
[2025-06-03 02:58:47]     "pilotErrorCode": 0,
[2025-06-03 02:58:47]     "pilotErrorDiag": "",
[2025-06-03 02:58:47]  *** Listing of results directory ***
[2025-06-03 02:58:47] total 391748
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 02:58:47] -rwx------. 1 boinc boinc     37140 Jun  2 17:59 runpilot2-wrapper.sh
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:59 queuedata.json
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc       100 Jun  2 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:58:47] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 22:52 run_atlas
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc       105 Jun  2 22:52 job.xml
[2025-06-03 02:58:47] -rw-r--r--. 2 boinc boinc 213101199 Jun  2 22:52 EVNT.45006593._000119.pool.root.1
[2025-06-03 02:58:47] -rw-r--r--. 2 boinc boinc    508871 Jun  2 22:52 input.tar.gz
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc      6393 Jun  2 22:52 init_data.xml
[2025-06-03 02:58:47] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:52 start_atlas.sh
[2025-06-03 02:58:47] drwxrwx--x. 2 boinc boinc        68 Jun  2 22:52 shared
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc         0 Jun  2 22:52 boinc_lockfile
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc      2522 Jun  2 22:55 pandaJob.out
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc    987975 Jun  2 22:55 agis_schedconf.cvmfs.json
[2025-06-03 02:58:47] drwx------. 4 boinc boinc      4096 Jun  2 22:55 pilot3
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc 181173064 Jun  3 02:33 HITS.45006595._002962.pool.root.1
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:33 boinc_task_state.xml
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc      1017 Jun  3 02:34 memory_monitor_summary.json
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc   1603667 Jun  3 02:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc    374549 Jun  3 02:34 log.45006595._002962.job.log.tgz.1
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc        95 Jun  3 02:35 pilot_heartbeat.json
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc      7701 Jun  3 02:35 heartbeat.json
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc      4798 Jun  3 02:36 pilotlog.txt
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc   1149234 Jun  3 02:36 log.45006595._002962.job.log.1
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc       357 Jun  3 02:36 output.list
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:36 runtime_log
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc   1546240 Jun  3 02:36 result.tar.gz
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc      8673 Jun  3 02:36 runtime_log.err
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc       656 Jun  3 02:36 3XIMDmpkMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqEfKDm56PYcn.diag
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc      8192 Jun  3 02:58 boinc_mmap_file
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc        28 Jun  3 02:58 wrapper_checkpoint.txt
[2025-06-03 02:58:47] -rw-r--r--. 1 boinc boinc     20715 Jun  3 02:58 stderr.txt
[2025-06-03 02:58:47] HITS file was successfully produced:
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc 181173064 Jun  3 02:33 shared/HITS.pool.root.1
[2025-06-03 02:58:47]  *** Contents of shared directory: ***
[2025-06-03 02:58:47] total 387064
[2025-06-03 02:58:47] -rw-r--r--. 2 boinc boinc 213101199 Jun  2 22:52 ATLAS.root_0
[2025-06-03 02:58:47] -rw-r--r--. 2 boinc boinc    508871 Jun  2 22:52 input.tar.gz
[2025-06-03 02:58:47] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:52 start_atlas.sh
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc 181173064 Jun  3 02:33 HITS.pool.root.1
[2025-06-03 02:58:47] -rw-------. 1 boinc boinc   1546240 Jun  3 02:36 result.tar.gz
02:58:49 (14843): run_atlas exited; CPU time 48588.982012
02:58:49 (14843): called boinc_finish(0)

</stderr_txt>
]]>

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