Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:27:25 (2054): wrapper (7.7.26015): starting
02:27:25 (2054): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:27:25] Arguments: --nthreads 8
[2025-06-03 02:27:25] Threads: 8
[2025-06-03 02:27:25] Checking for CVMFS
[2025-06-03 02:27:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:27:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:27:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:27:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:27:27] 2.11.2.0 23942 31044 102516 146723 0 155 21088531 25165824 4353 130560 0 16801127 99.855 16042527 1803 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:27:27] CVMFS is ok
[2025-06-03 02:27:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:27:27] Checking for apptainer binary...
[2025-06-03 02:27:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:27:27] Running /usr/bin/apptainer --version
[2025-06-03 02:27:27] apptainer version 1.3.2-1.el7
[2025-06-03 02:27:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:27:29] cg-vwn380.simple-grid.lan
[2025-06-03 02:27:29] apptainer works
[2025-06-03 02:27:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:27:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:27:29] Starting ATLAS job with PandaID=6677381747
[2025-06-03 02:27:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:49:05]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:49:05] 2025-06-03 04:10:32,953 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677381747/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:49:05] 2025-06-03 04:10:32,954 | INFO     | extracted standard info from prmon json
[2025-06-03 06:49:05] 2025-06-03 04:10:32,954 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:49:05] 2025-06-03 04:10:32,954 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:49:05] 2025-06-03 04:10:32,955 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:49:05] 2025-06-03 04:10:32,955 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:49:05] 2025-06-03 04:10:32,959 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:49:05] 2025-06-03 04:10:32,960 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,962 | INFO     | sum of deviations: -61723805809.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,962 | INFO     | mean x: 1748917130.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,962 | INFO     | mean y: 2578070.3087557605
[2025-06-03 06:49:05] 2025-06-03 04:10:32,962 | INFO     | -- intersect: 34072687242.35296
[2025-06-03 06:49:05] 2025-06-03 04:10:32,962 | INFO     | intersect: 34072687242.35296
[2025-06-03 06:49:05] 2025-06-03 04:10:32,963 | INFO     | chi2: 2.7062591560943967
[2025-06-03 06:49:05] 2025-06-03 04:10:32,963 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,965 | INFO     | sum of deviations: -44162527155.00001
[2025-06-03 06:49:05] 2025-06-03 04:10:32,965 | INFO     | mean x: 1748916977.5
[2025-06-03 06:49:05] 2025-06-03 04:10:32,965 | INFO     | mean y: 2590394.433962264
[2025-06-03 06:49:05] 2025-06-03 04:10:32,965 | INFO     | -- intersect: 26145069375.069534
[2025-06-03 06:49:05] 2025-06-03 04:10:32,965 | INFO     | intersect: 26145069375.069534
[2025-06-03 06:49:05] 2025-06-03 04:10:32,966 | INFO     | chi2: 1.9427779532439189
[2025-06-03 06:49:05] 2025-06-03 04:10:32,966 | INFO     | current chi2=1.9427779532439189 (change=28.211681099762604 %)
[2025-06-03 06:49:05] 2025-06-03 04:10:32,966 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,968 | INFO     | sum of deviations: -41128118632.99999
[2025-06-03 06:49:05] 2025-06-03 04:10:32,968 | INFO     | mean x: 1748916825.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,968 | INFO     | mean y: 2592661.526570048
[2025-06-03 06:49:05] 2025-06-03 04:10:32,968 | INFO     | -- intersect: 26156023884.59955
[2025-06-03 06:49:05] 2025-06-03 04:10:32,968 | INFO     | intersect: 26156023884.59955
[2025-06-03 06:49:05] 2025-06-03 04:10:32,968 | INFO     | chi2: 1.9427412025068422
[2025-06-03 06:49:05] 2025-06-03 04:10:32,969 | INFO     | current chi2=1.9427412025068422 (change=0.0018916591582320505 %)
[2025-06-03 06:49:05] 2025-06-03 04:10:32,969 | INFO     | right removable region: 206
[2025-06-03 06:49:05] 2025-06-03 04:10:32,969 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,971 | INFO     | sum of deviations: -100719084055.5
[2025-06-03 06:49:05] 2025-06-03 04:10:32,971 | INFO     | mean x: 1748917282.5
[2025-06-03 06:49:05] 2025-06-03 04:10:32,971 | INFO     | mean y: 2605622.636792453
[2025-06-03 06:49:05] 2025-06-03 04:10:32,971 | INFO     | -- intersect: 59624352082.36674
[2025-06-03 06:49:05] 2025-06-03 04:10:32,971 | INFO     | intersect: 59624352082.36674
[2025-06-03 06:49:05] 2025-06-03 04:10:32,971 | INFO     | chi2: 1.0093140367616575
[2025-06-03 06:49:05] 2025-06-03 04:10:32,972 | INFO     | current chi2=1.0093140367616575 (change=62.70445738765561 %)
[2025-06-03 06:49:05] 2025-06-03 04:10:32,972 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,973 | INFO     | sum of deviations: -101320585687.99998
[2025-06-03 06:49:05] 2025-06-03 04:10:32,974 | INFO     | mean x: 1748917435.0
[2025-06-03 06:49:05] 2025-06-03 04:10:32,974 | INFO     | mean y: 2606031.690821256
[2025-06-03 06:49:05] 2025-06-03 04:10:32,974 | INFO     | -- intersect: 64432538194.72576
[2025-06-03 06:49:05] 2025-06-03 04:10:32,974 | INFO     | intersect: 64432538194.72576
[2025-06-03 06:49:05] 2025-06-03 04:10:32,974 | INFO     | chi2: 0.9653067508126294
[2025-06-03 06:49:05] 2025-06-03 04:10:32,974 | INFO     | current chi2=0.9653067508126294 (change=4.360118292838145 %)
[2025-06-03 06:49:05] 2025-06-03 04:10:32,975 | INFO     | left removable region: 20
[2025-06-03 06:49:05] 2025-06-03 04:10:32,975 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 06:49:05] 2025-06-03 04:10:32,976 | INFO     | sum of deviations: -72034056949.50003
[2025-06-03 06:49:05] 2025-06-03 04:10:32,976 | INFO     | mean x: 1748917404.5
[2025-06-03 06:49:05] 2025-06-03 04:10:32,976 | INFO     | mean y: 2617038.2526881723
[2025-06-03 06:49:05] 2025-06-03 04:10:32,977 | INFO     | -- intersect: 63142310840.764534
[2025-06-03 06:49:05] 2025-06-03 04:10:32,977 | INFO     | intersect: 63142310840.764534
[2025-06-03 06:49:05] 2025-06-03 04:10:32,977 | INFO     | chi2: 0.1606603860739092
[2025-06-03 06:49:05] 2025-06-03 04:10:32,977 | INFO     | -- intersect: 63142310840.764534
[2025-06-03 06:49:05] 2025-06-03 04:10:32,977 | INFO     | current memory leak: -36.10 B/s (using 186 data points, chi2=0.16)
[2025-06-03 06:49:05] 2025-06-03 04:10:32,978 | INFO     | ..............................
[2025-06-03 06:49:05] 2025-06-03 04:10:32,978 | INFO     | . Timing measurements:
[2025-06-03 06:49:05] 2025-06-03 04:10:32,978 | INFO     | . get job = 0 s
[2025-06-03 06:49:05] 2025-06-03 04:10:32,978 | INFO     | . initial setup = 3 s
[2025-06-03 06:49:05] 2025-06-03 04:10:32,979 | INFO     | . payload setup = 14 s
[2025-06-03 06:49:05] 2025-06-03 04:10:32,979 | INFO     | . stage-in = 0 s
[2025-06-03 06:49:05] 2025-06-03 04:10:32,979 | INFO     | . payload execution = 13208 s
[2025-06-03 06:49:05] 2025-06-03 04:10:32,979 | INFO     | . stage-out = 2 s
[2025-06-03 06:49:05] 2025-06-03 04:10:32,979 | INFO     | . log creation = 0 s
[2025-06-03 06:49:05] 2025-06-03 04:10:32,979 | INFO     | ..............................
[2025-06-03 06:49:05] 2025-06-03 04:10:33,110 | INFO     | 
[2025-06-03 06:49:05] 2025-06-03 04:10:33,110 | INFO     | job summary report
[2025-06-03 06:49:05] 2025-06-03 04:10:33,110 | INFO     | --------------------------------------------------
[2025-06-03 06:49:05] 2025-06-03 04:10:33,110 | INFO     | PanDA job id: 6677381747
[2025-06-03 06:49:05] 2025-06-03 04:10:33,110 | INFO     | task id: 45006595
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | errors: (none)
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | pilot state: finished 
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | transexitcode: 0
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | exeerrorcode: 0
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | exeerrordiag: 
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | exitcode: 0
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | exitmsg: OK
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | cpuconsumptiontime: 49610 s
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | nevents: 400
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | neventsw: 0
[2025-06-03 06:49:05] 2025-06-03 04:10:33,111 | INFO     | pid: 16548
[2025-06-03 06:49:05] 2025-06-03 04:10:33,112 | INFO     | pgrp: 16548
[2025-06-03 06:49:05] 2025-06-03 04:10:33,112 | INFO     | corecount: 8
[2025-06-03 06:49:05] 2025-06-03 04:10:33,112 | INFO     | event service: False
[2025-06-03 06:49:05] 2025-06-03 04:10:33,112 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 16: 2405439, 23: 2405467, 13227: 2435243, 13230: 2444184, 13232: 2444240, 13325: 2444410}
[2025-06-03 06:49:05] 2025-06-03 04:10:33,112 | INFO     | --------------------------------------------------
[2025-06-03 06:49:05] 2025-06-03 04:10:33,112 | INFO     | 
[2025-06-03 06:49:05] 2025-06-03 04:10:33,112 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 06:49:05] 2025-06-03 04:10:33,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:49:05] 2025-06-03 04:10:33,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:49:05] 2025-06-03 04:10:33,370 | INFO     | job 6677381747 has completed (purged errors)
[2025-06-03 06:49:05] 2025-06-03 04:10:33,370 | INFO     | overall cleanup function is called
[2025-06-03 06:49:05] 2025-06-03 04:10:34,380 | INFO     | --- collectZombieJob: --- 10, [16548]
[2025-06-03 06:49:05] 2025-06-03 04:10:34,380 | INFO     | zombie collector waiting for pid 16548
[2025-06-03 06:49:05] 2025-06-03 04:10:34,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:49:05] 2025-06-03 04:10:34,381 | INFO     | collected zombie processes
[2025-06-03 06:49:05] 2025-06-03 04:10:34,381 | INFO     | will attempt to kill all subprocesses of pid=16548
[2025-06-03 06:49:05] 2025-06-03 04:10:34,486 | INFO     | process IDs to be killed: [16548] (in reverse order)
[2025-06-03 06:49:05] 2025-06-03 04:10:35,207 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:49:05] 2025-06-03 04:10:35,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:49:05] 2025-06-03 04:10:35,211 | INFO     | did not find any defunct processes belonging to 16548
[2025-06-03 06:49:05] 2025-06-03 04:10:35,214 | INFO     | did not find any defunct processes belonging to 16548
[2025-06-03 06:49:05] 2025-06-03 04:10:35,215 | INFO     | ready for new job
[2025-06-03 06:49:05] 2025-06-03 04:10:35,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:49:05] 2025-06-03 04:10:35,217 | INFO     | **************************************
[2025-06-03 06:49:05] 2025-06-03 04:10:35,217 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:49:05] 2025-06-03 04:10:35,218 | INFO     | **************************************
[2025-06-03 06:49:05] 2025-06-03 04:10:35,218 | INFO     | 
[2025-06-03 06:49:05] 2025-06-03 04:10:35,218 | INFO     | pilot is running in a VM
[2025-06-03 06:49:05] 2025-06-03 04:10:35,218 | INFO     | architecture information:
[2025-06-03 06:49:05] 2025-06-03 04:10:35,231 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:49:05] 2025-06-03 04:10:35,537 | INFO     | cat /etc/os-release:
[2025-06-03 06:49:05] NAME="CentOS Linux"
[2025-06-03 06:49:05] VERSION="7 (Core)"
[2025-06-03 06:49:05] ID="centos"
[2025-06-03 06:49:05] ID_LIKE="rhel fedora"
[2025-06-03 06:49:05] VERSION_ID="7"
[2025-06-03 06:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:49:05] ANSI_COLOR="0;31"
[2025-06-03 06:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:49:05] HOME_URL="https://www.centos.org/"
[2025-06-03 06:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:49:05] 
[2025-06-03 06:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:49:05] 
[2025-06-03 06:49:05] 2025-06-03 04:10:35,537 | INFO     | **************************************
[2025-06-03 06:49:05] 2025-06-03 04:10:36,040 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 06:49:05] 2025-06-03 04:10:36,293 | INFO     | sufficient remaining disk space (496974692352 B)
[2025-06-03 06:49:05] 2025-06-03 04:10:36,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:49:05] 2025-06-03 04:10:36,293 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:49:05] 2025-06-03 04:10:36,293 | INFO     | update_server=False
[2025-06-03 06:49:05] 2025-06-03 04:10:36,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:49:05] 2025-06-03 04:10:36,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:49:05] 2025-06-03 04:10:36,296 | INFO     | aborting loop
[2025-06-03 06:49:05] 2025-06-03 04:10:36,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:49:05] 2025-06-03 04:10:36,580 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:49:05] 2025-06-03 04:10:36,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:49:05] 2025-06-03 04:10:36,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:49:05] 2025-06-03 04:10:36,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:49:05] 2025-06-03 04:10:37,164 | INFO     | all data control threads have been joined
[2025-06-03 06:49:05] 2025-06-03 04:10:37,211 | INFO     | all payload control threads have been joined
[2025-06-03 06:49:05] 2025-06-03 04:10:37,299 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:37,301 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:37,492 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:37,610 | INFO     | all job control threads have been joined
[2025-06-03 06:49:05] 2025-06-03 04:10:37,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:49:05] 2025-06-03 04:10:38,170 | INFO     | [data] control thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,209 | INFO     | [job] validate thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,217 | INFO     | [payload] control thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,250 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,371 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,372 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,516 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,610 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,616 | INFO     | [job] control thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:38,857 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:39,133 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:40,336 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:49:05] 2025-06-03 04:10:41,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196971538240)>', '<ExcThread(monitor, started 140196288902912)>']
[2025-06-03 06:49:05] 2025-06-03 04:10:42,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:49:05] 2025-06-03 04:10:42,618 | INFO     | [monitor] control thread has ended
[2025-06-03 06:49:05] 2025-06-03 04:10:46,873 | INFO     | all workflow threads have been joined
[2025-06-03 06:49:05] 2025-06-03 04:10:46,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:49:05] 2025-06-03 04:10:46,874 | INFO     | traces error code: 0
[2025-06-03 06:49:05] 2025-06-03 04:10:46,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:49:05] 2025-06-03 04:10:47,138 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:49:05] 2025-06-03 04:10:47,204 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:49:05] 2025-06-03 04:10:47,331 [wrapper] pilotpid: 8030
[2025-06-03 06:49:05] 2025-06-03 04:10:47,436 [wrapper] Pilot exit status: 0
[2025-06-03 06:49:05] 2025-06-03 04:10:47,917 [wrapper] pandaids: 6677381747
[2025-06-03 06:49:05] 2025-06-03 04:10:48,845 [wrapper] cleanup supervisor_pilot  9191 8031
[2025-06-03 06:49:05] 2025-06-03 04:10:48,935 [wrapper] Test setup, not cleaning
[2025-06-03 06:49:05] 2025-06-03 04:10:49,052 [wrapper] apfmon messages muted
[2025-06-03 06:49:05] 2025-06-03 04:10:49,130 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:49:05] 2025-06-03 04:10:49,211 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:49:05]  *** Error codes and diagnostics ***
[2025-06-03 06:49:05]     "exeErrorCode": 0,
[2025-06-03 06:49:05]     "exeErrorDiag": "",
[2025-06-03 06:49:05]     "pilotErrorCode": 0,
[2025-06-03 06:49:05]     "pilotErrorDiag": "",
[2025-06-03 06:49:05]  *** Listing of results directory ***
[2025-06-03 06:49:05] total 397100
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 06:49:05] -rwx------. 1 boinc boinc     37140 Jun  2 17:57 runpilot2-wrapper.sh
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:57 queuedata.json
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:49:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:27 run_atlas
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:27 job.xml
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc      6392 Jun  3 02:27 init_data.xml
[2025-06-03 06:49:05] -rw-r--r--. 2 boinc boinc 216676288 Jun  3 02:27 EVNT.45006593._000105.pool.root.1
[2025-06-03 06:49:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:27 start_atlas.sh
[2025-06-03 06:49:05] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:27 shared
[2025-06-03 06:49:05] -rw-r--r--. 2 boinc boinc    508875 Jun  3 02:27 input.tar.gz
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:27 boinc_lockfile
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc      2521 Jun  3 02:27 pandaJob.out
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc    988081 Jun  3 02:27 agis_schedconf.cvmfs.json
[2025-06-03 06:49:05] drwx------. 4 boinc boinc      4096 Jun  3 02:27 pilot3
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc 183033602 Jun  3 06:07 HITS.45006595._002621.pool.root.1
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc       530 Jun  3 06:07 boinc_task_state.xml
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc      1031 Jun  3 06:08 memory_monitor_summary.json
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc   1603667 Jun  3 06:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc    387229 Jun  3 06:08 log.45006595._002621.job.log.tgz.1
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc        95 Jun  3 06:10 pilot_heartbeat.json
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc      7688 Jun  3 06:10 heartbeat.json
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc      4416 Jun  3 06:10 pilotlog.txt
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc   1160017 Jun  3 06:10 log.45006595._002621.job.log.1
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc       357 Jun  3 06:10 output.list
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:10 runtime_log
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc   1566720 Jun  3 06:10 result.tar.gz
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc      8659 Jun  3 06:10 runtime_log.err
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc       656 Jun  3 06:10 9r8LDmkiMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuDfKDmfDMdWm.diag
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:49 boinc_mmap_file
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:49 wrapper_checkpoint.txt
[2025-06-03 06:49:05] -rw-r--r--. 1 boinc boinc     20501 Jun  3 06:49 stderr.txt
[2025-06-03 06:49:05] HITS file was successfully produced:
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc 183033602 Jun  3 06:07 shared/HITS.pool.root.1
[2025-06-03 06:49:05]  *** Contents of shared directory: ***
[2025-06-03 06:49:05] total 392392
[2025-06-03 06:49:05] -rw-r--r--. 2 boinc boinc 216676288 Jun  3 02:27 ATLAS.root_0
[2025-06-03 06:49:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:27 start_atlas.sh
[2025-06-03 06:49:05] -rw-r--r--. 2 boinc boinc    508875 Jun  3 02:27 input.tar.gz
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc 183033602 Jun  3 06:07 HITS.pool.root.1
[2025-06-03 06:49:05] -rw-------. 1 boinc boinc   1566720 Jun  3 06:10 result.tar.gz
06:49:07 (2054): run_atlas exited; CPU time 49775.561627
06:49:07 (2054): called boinc_finish(0)

</stderr_txt>
]]>

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