Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:50:00 (31468): wrapper (7.7.26015): starting
05:50:00 (31468): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:50:00] Arguments: --nthreads 8
[2025-06-03 05:50:00] Threads: 8
[2025-06-03 05:50:00] Checking for CVMFS
[2025-06-03 05:50:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:50:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:50:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:50:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:50:03] 2.11.2.0 14321 31265 94408 146724 2 16 12805792 25165824 4632 130560 0 15834525 99.838 16262689 1839 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:50:03] CVMFS is ok
[2025-06-03 05:50:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:50:03] Checking for apptainer binary...
[2025-06-03 05:50:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:50:03] Running /usr/bin/apptainer --version
[2025-06-03 05:50:03] apptainer version 1.3.2-1.el7
[2025-06-03 05:50:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:55:06] cg-vwn391.simple-grid.lan
[2025-06-03 07:55:06] apptainer works
[2025-06-03 07:55:06] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:55:06] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:55:06] Starting ATLAS job with PandaID=6677381616
[2025-06-03 07:55:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:49:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:49:26] 2025-06-03 09:42:37,967 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6677381616/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:49:26] 2025-06-03 09:42:37,968 | INFO     | extracted standard info from prmon json
[2025-06-03 12:49:26] 2025-06-03 09:42:37,968 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:49:26] 2025-06-03 09:42:37,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:49:26] 2025-06-03 09:42:37,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:49:26] 2025-06-03 09:42:37,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:49:26] 2025-06-03 09:42:37,973 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:49:26] 2025-06-03 09:42:37,973 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,975 | INFO     | sum of deviations: -5051298796.999994
[2025-06-03 12:49:26] 2025-06-03 09:42:37,976 | INFO     | mean x: 1748936904.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,976 | INFO     | mean y: 2488708.5429864256
[2025-06-03 12:49:26] 2025-06-03 09:42:37,976 | INFO     | -- intersect: 2642044510.8627105
[2025-06-03 12:49:26] 2025-06-03 09:42:37,976 | INFO     | intersect: 2642044510.8627105
[2025-06-03 12:49:26] 2025-06-03 09:42:37,976 | INFO     | chi2: 2.4234612189369003
[2025-06-03 12:49:26] 2025-06-03 09:42:37,977 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,979 | INFO     | sum of deviations: 9640780868.000006
[2025-06-03 12:49:26] 2025-06-03 09:42:37,979 | INFO     | mean x: 1748936751.5
[2025-06-03 12:49:26] 2025-06-03 09:42:37,979 | INFO     | mean y: 2498613.4907407407
[2025-06-03 12:49:26] 2025-06-03 09:42:37,979 | INFO     | -- intersect: -5393302664.417096
[2025-06-03 12:49:26] 2025-06-03 09:42:37,979 | INFO     | intersect: -5393302664.417096
[2025-06-03 12:49:26] 2025-06-03 09:42:37,979 | INFO     | chi2: 1.6508873759857274
[2025-06-03 12:49:26] 2025-06-03 09:42:37,980 | INFO     | current chi2=1.6508873759857274 (change=31.87894392178794 %)
[2025-06-03 12:49:26] 2025-06-03 09:42:37,980 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,981 | INFO     | sum of deviations: 9428366973.000002
[2025-06-03 12:49:26] 2025-06-03 09:42:37,982 | INFO     | mean x: 1748936599.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,982 | INFO     | mean y: 2498460.682464455
[2025-06-03 12:49:26] 2025-06-03 09:42:37,982 | INFO     | -- intersect: -5658519190.593601
[2025-06-03 12:49:26] 2025-06-03 09:42:37,982 | INFO     | intersect: -5658519190.593601
[2025-06-03 12:49:26] 2025-06-03 09:42:37,982 | INFO     | chi2: 1.6515587315132454
[2025-06-03 12:49:26] 2025-06-03 09:42:37,982 | INFO     | current chi2=1.6515587315132454 (change=-0.04066634328202425 %)
[2025-06-03 12:49:26] 2025-06-03 09:42:37,983 | INFO     | right removable region: 210
[2025-06-03 12:49:26] 2025-06-03 09:42:37,983 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,985 | INFO     | sum of deviations: -39628945819.49999
[2025-06-03 12:49:26] 2025-06-03 09:42:37,985 | INFO     | mean x: 1748937056.5
[2025-06-03 12:49:26] 2025-06-03 09:42:37,985 | INFO     | mean y: 2512225.597222222
[2025-06-03 12:49:26] 2025-06-03 09:42:37,985 | INFO     | -- intersect: 22182246078.371117
[2025-06-03 12:49:26] 2025-06-03 09:42:37,985 | INFO     | intersect: 22182246078.371117
[2025-06-03 12:49:26] 2025-06-03 09:42:37,986 | INFO     | chi2: 0.946742089662216
[2025-06-03 12:49:26] 2025-06-03 09:42:37,986 | INFO     | current chi2=0.946742089662216 (change=60.93429998943729 %)
[2025-06-03 12:49:26] 2025-06-03 09:42:37,986 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,988 | INFO     | sum of deviations: -35277619796.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,988 | INFO     | mean x: 1748937209.0
[2025-06-03 12:49:26] 2025-06-03 09:42:37,988 | INFO     | mean y: 2509067.511848341
[2025-06-03 12:49:26] 2025-06-03 09:42:37,988 | INFO     | -- intersect: 21184045444.556084
[2025-06-03 12:49:26] 2025-06-03 09:42:37,988 | INFO     | intersect: 21184045444.556084
[2025-06-03 12:49:26] 2025-06-03 09:42:37,989 | INFO     | chi2: 0.9331124413781707
[2025-06-03 12:49:26] 2025-06-03 09:42:37,989 | INFO     | current chi2=0.9331124413781707 (change=1.4396368802941981 %)
[2025-06-03 12:49:26] 2025-06-03 09:42:37,989 | INFO     | left removable region: 20
[2025-06-03 12:49:26] 2025-06-03 09:42:37,989 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 12:49:26] 2025-06-03 09:42:37,991 | INFO     | sum of deviations: -6540544226.500001
[2025-06-03 12:49:26] 2025-06-03 09:42:37,991 | INFO     | mean x: 1748937178.5
[2025-06-03 12:49:26] 2025-06-03 09:42:37,991 | INFO     | mean y: 2508749.9736842103
[2025-06-03 12:49:26] 2025-06-03 09:42:37,991 | INFO     | -- intersect: 5381005373.167983
[2025-06-03 12:49:26] 2025-06-03 09:42:37,991 | INFO     | intersect: 5381005373.167983
[2025-06-03 12:49:26] 2025-06-03 09:42:37,991 | INFO     | chi2: 0.08156675353317383
[2025-06-03 12:49:26] 2025-06-03 09:42:37,992 | INFO     | -- intersect: 5381005373.167983
[2025-06-03 12:49:26] 2025-06-03 09:42:37,992 | INFO     | current memory leak: -3.08 B/s (using 190 data points, chi2=0.08)
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | ..............................
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . Timing measurements:
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . get job = 0 s
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . initial setup = 2 s
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . payload setup = 13 s
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . stage-in = 0 s
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . payload execution = 13498 s
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . stage-out = 4 s
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | . log creation = 1 s
[2025-06-03 12:49:26] 2025-06-03 09:42:37,993 | INFO     | ..............................
[2025-06-03 12:49:26] 2025-06-03 09:42:38,123 | INFO     | 
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | job summary report
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | --------------------------------------------------
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | PanDA job id: 6677381616
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | task id: 45006595
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | errors: (none)
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | pilot state: finished 
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | transexitcode: 0
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | exeerrorcode: 0
[2025-06-03 12:49:26] 2025-06-03 09:42:38,124 | INFO     | exeerrordiag: 
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | exitcode: 0
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | exitmsg: OK
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | cpuconsumptiontime: 49738 s
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | nevents: 400
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | neventsw: 0
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | pid: 14999
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | pgrp: 14999
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | corecount: 8
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | event service: False
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | sizes: {0: 2404949, 1: 2405204, 2: 2405204, 10: 2405438, 12: 2405466, 13515: 2435326, 13520: 2444269, 13521: 2444325, 13601: 2444495}
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | --------------------------------------------------
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | 
[2025-06-03 12:49:26] 2025-06-03 09:42:38,125 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-03 12:49:26] 2025-06-03 09:42:38,150 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,152 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:49:26] 2025-06-03 09:42:38,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:49:26] 2025-06-03 09:42:38,153 | INFO     | job 6677381616 has completed (purged errors)
[2025-06-03 12:49:26] 2025-06-03 09:42:38,153 | INFO     | overall cleanup function is called
[2025-06-03 12:49:26] 2025-06-03 09:42:39,162 | INFO     | --- collectZombieJob: --- 10, [14999]
[2025-06-03 12:49:26] 2025-06-03 09:42:39,162 | INFO     | zombie collector waiting for pid 14999
[2025-06-03 12:49:26] 2025-06-03 09:42:39,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:49:26] 2025-06-03 09:42:39,162 | INFO     | collected zombie processes
[2025-06-03 12:49:26] 2025-06-03 09:42:39,162 | INFO     | will attempt to kill all subprocesses of pid=14999
[2025-06-03 12:49:26] 2025-06-03 09:42:39,271 | INFO     | process IDs to be killed: [14999] (in reverse order)
[2025-06-03 12:49:26] 2025-06-03 09:42:39,347 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:49:26] 2025-06-03 09:42:39,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:49:26] 2025-06-03 09:42:39,351 | INFO     | did not find any defunct processes belonging to 14999
[2025-06-03 12:49:26] 2025-06-03 09:42:39,355 | INFO     | did not find any defunct processes belonging to 14999
[2025-06-03 12:49:26] 2025-06-03 09:42:39,355 | INFO     | ready for new job
[2025-06-03 12:49:26] 2025-06-03 09:42:39,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:49:26] 2025-06-03 09:42:39,357 | INFO     | **************************************
[2025-06-03 12:49:26] 2025-06-03 09:42:39,357 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:49:26] 2025-06-03 09:42:39,358 | INFO     | **************************************
[2025-06-03 12:49:26] 2025-06-03 09:42:39,358 | INFO     | 
[2025-06-03 12:49:26] 2025-06-03 09:42:39,358 | INFO     | pilot is running in a VM
[2025-06-03 12:49:26] 2025-06-03 09:42:39,358 | INFO     | architecture information:
[2025-06-03 12:49:26] 2025-06-03 09:42:39,359 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:49:26] 2025-06-03 09:42:39,427 | INFO     | cat /etc/os-release:
[2025-06-03 12:49:26] NAME="CentOS Linux"
[2025-06-03 12:49:26] VERSION="7 (Core)"
[2025-06-03 12:49:26] ID="centos"
[2025-06-03 12:49:26] ID_LIKE="rhel fedora"
[2025-06-03 12:49:26] VERSION_ID="7"
[2025-06-03 12:49:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:49:26] ANSI_COLOR="0;31"
[2025-06-03 12:49:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:49:26] HOME_URL="https://www.centos.org/"
[2025-06-03 12:49:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:49:26] 
[2025-06-03 12:49:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:49:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:49:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:49:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:49:26] 
[2025-06-03 12:49:26] 2025-06-03 09:42:39,428 | INFO     | **************************************
[2025-06-03 12:49:26] 2025-06-03 09:42:39,931 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-03 12:49:26] 2025-06-03 09:42:40,189 | INFO     | sufficient remaining disk space (496964206592 B)
[2025-06-03 12:49:26] 2025-06-03 09:42:40,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:49:26] 2025-06-03 09:42:40,189 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:49:26] 2025-06-03 09:42:40,189 | INFO     | update_server=False
[2025-06-03 12:49:26] 2025-06-03 09:42:40,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:49:26] 2025-06-03 09:42:40,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:49:26] 2025-06-03 09:42:40,619 | INFO     | all data control threads have been joined
[2025-06-03 12:49:26] 2025-06-03 09:42:40,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:49:26] 2025-06-03 09:42:40,620 | INFO     | aborting loop
[2025-06-03 12:49:26] 2025-06-03 09:42:40,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:49:26] 2025-06-03 09:42:40,855 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:49:26] 2025-06-03 09:42:40,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:49:26] 2025-06-03 09:42:40,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:49:26] 2025-06-03 09:42:41,196 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:41,366 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:41,400 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:41,450 | INFO     | all job control threads have been joined
[2025-06-03 12:49:26] 2025-06-03 09:42:41,502 | INFO     | all payload control threads have been joined
[2025-06-03 12:49:26] 2025-06-03 09:42:41,625 | INFO     | [data] control thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:41,626 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:41,654 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:41,750 | INFO     | [job] validate thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:41,991 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:42,219 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:42,329 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:42,456 | INFO     | [job] control thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:42,507 | INFO     | [payload] control thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:42,577 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:42,599 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:43,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:49:26] 2025-06-03 09:42:44,148 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:44,663 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:49:26] 2025-06-03 09:42:44,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587528279872)>', '<ExcThread(monitor, started 140586946385664)>']
[2025-06-03 12:49:26] 2025-06-03 09:42:45,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:49:26] 2025-06-03 09:42:45,886 | INFO     | [monitor] control thread has ended
[2025-06-03 12:49:26] 2025-06-03 09:42:49,928 | INFO     | all workflow threads have been joined
[2025-06-03 12:49:26] 2025-06-03 09:42:49,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:49:26] 2025-06-03 09:42:49,928 | INFO     | traces error code: 0
[2025-06-03 12:49:26] 2025-06-03 09:42:49,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:49:26] 2025-06-03 09:42:50,154 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:49:26] 2025-06-03 09:42:50,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:49:26] 2025-06-03 09:42:50,247 [wrapper] pilotpid: 6392
[2025-06-03 12:49:26] 2025-06-03 09:42:50,343 [wrapper] Pilot exit status: 0
[2025-06-03 12:49:26] 2025-06-03 09:42:50,886 [wrapper] pandaids: 6677381616
[2025-06-03 12:49:26] 2025-06-03 09:42:51,598 [wrapper] cleanup supervisor_pilot  6352 6393
[2025-06-03 12:49:26] 2025-06-03 09:42:51,613 [wrapper] Test setup, not cleaning
[2025-06-03 12:49:26] 2025-06-03 09:42:51,631 [wrapper] apfmon messages muted
[2025-06-03 12:49:26] 2025-06-03 09:42:51,651 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:49:26] 2025-06-03 09:42:51,739 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:49:26]  *** Error codes and diagnostics ***
[2025-06-03 12:49:26]     "exeErrorCode": 0,
[2025-06-03 12:49:26]     "exeErrorDiag": "",
[2025-06-03 12:49:26]     "pilotErrorCode": 0,
[2025-06-03 12:49:26]     "pilotErrorDiag": "",
[2025-06-03 12:49:26]  *** Listing of results directory ***
[2025-06-03 12:49:26] total 394096
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 12:49:26] -rwx------. 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:57 queuedata.json
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:49:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 05:49 run_atlas
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 05:49 job.xml
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc      6393 Jun  3 05:50 init_data.xml
[2025-06-03 12:49:26] -rw-r--r--. 2 boinc boinc 215738116 Jun  3 05:50 EVNT.45006593._000100.pool.root.1
[2025-06-03 12:49:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 05:50 shared
[2025-06-03 12:49:26] -rw-r--r--. 2 boinc boinc    508879 Jun  3 05:50 input.tar.gz
[2025-06-03 12:49:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:50 start_atlas.sh
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 05:50 boinc_lockfile
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc      2520 Jun  3 07:55 pandaJob.out
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc    988073 Jun  3 07:55 agis_schedconf.cvmfs.json
[2025-06-03 12:49:26] drwx------. 4 boinc boinc      4096 Jun  3 07:55 pilot3
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc 180850743 Jun  3 11:39 HITS.45006595._002490.pool.root.1
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:39 boinc_task_state.xml
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc      1020 Jun  3 11:41 memory_monitor_summary.json
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc   1603667 Jun  3 11:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc    382786 Jun  3 11:41 log.45006595._002490.job.log.tgz.1
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc        95 Jun  3 11:42 pilot_heartbeat.json
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc      7687 Jun  3 11:42 heartbeat.json
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc      4417 Jun  3 11:42 pilotlog.txt
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc   1186816 Jun  3 11:42 log.45006595._002490.job.log.1
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc       357 Jun  3 11:42 output.list
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:42 runtime_log
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc   1587200 Jun  3 11:42 result.tar.gz
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc       657 Jun  3 11:42 T4EMDmohMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrCfKDmVI0n7m.diag
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc      8673 Jun  3 11:42 runtime_log.err
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:49 boinc_mmap_file
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:49 wrapper_checkpoint.txt
[2025-06-03 12:49:26] -rw-r--r--. 1 boinc boinc     20507 Jun  3 12:49 stderr.txt
[2025-06-03 12:49:26] HITS file was successfully produced:
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc 180850743 Jun  3 11:39 shared/HITS.pool.root.1
[2025-06-03 12:49:26]  *** Contents of shared directory: ***
[2025-06-03 12:49:26] total 389368
[2025-06-03 12:49:26] -rw-r--r--. 2 boinc boinc 215738116 Jun  3 05:50 ATLAS.root_0
[2025-06-03 12:49:26] -rw-r--r--. 2 boinc boinc    508879 Jun  3 05:50 input.tar.gz
[2025-06-03 12:49:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:50 start_atlas.sh
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc 180850743 Jun  3 11:39 HITS.pool.root.1
[2025-06-03 12:49:26] -rw-------. 1 boinc boinc   1587200 Jun  3 11:42 result.tar.gz
12:49:28 (31468): run_atlas exited; CPU time 49913.910698
12:49:28 (31468): called boinc_finish(0)

</stderr_txt>
]]>

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