Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:08 (14232): wrapper (7.7.26015): starting
23:27:08 (14232): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 23:27:08] Arguments: --nthreads 8
[2025-06-02 23:27:08] Threads: 8
[2025-06-02 23:27:08] Checking for CVMFS
[2025-06-02 23:27:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:27:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:27:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:27:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:27:10] 2.11.2.0 4192 31048 91436 146718 3 168 23868127 25165825 4106 130560 0 15220437 99.830 16248420 1996 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 23:27:10] CVMFS is ok
[2025-06-02 23:27:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:27:10] Checking for apptainer binary...
[2025-06-02 23:27:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:27:10] Running /usr/bin/apptainer --version
[2025-06-02 23:27:10] apptainer version 1.3.2-1.el7
[2025-06-02 23:27:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:27:13] cg-vwn295.simple-grid.lan
[2025-06-02 23:27:13] apptainer works
[2025-06-02 23:27:13] Set ATHENA_PROC_NUMBER=8
[2025-06-02 23:27:13] Set ATHENA_CORE_NUMBER=8
[2025-06-02 23:27:13] Starting ATLAS job with PandaID=6677381577
[2025-06-02 23:27:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:35:47]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:35:47] 2025-06-03 01:15:51,426 | INFO     | PID=22787 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 03:35:47] 2025-06-03 01:15:51,427 | INFO     | .. there are 9 such processes running
[2025-06-03 03:35:47] 2025-06-03 01:15:51,940 | INFO     | monitor loop #1008: job 0:6677381577 is in state 'finished'
[2025-06-03 03:35:47] 2025-06-03 01:15:51,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:35:47] 2025-06-03 01:15:54,445 | INFO     | monitor loop #1009: job 0:6677381577 is in state 'finished'
[2025-06-03 03:35:47] 2025-06-03 01:15:54,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,291 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 03:35:47] 2025-06-03 01:15:56,292 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677381577/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,292 | INFO     | extracted standard info from prmon json
[2025-06-03 03:35:47] 2025-06-03 01:15:56,293 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:35:47] 2025-06-03 01:15:56,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:35:47] 2025-06-03 01:15:56,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:35:47] 2025-06-03 01:15:56,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:35:47] 2025-06-03 01:15:56,298 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:35:47] 2025-06-03 01:15:56,299 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,301 | INFO     | sum of deviations: -3119386493.4999866
[2025-06-03 03:35:47] 2025-06-03 01:15:56,301 | INFO     | mean x: 1748906654.5
[2025-06-03 03:35:47] 2025-06-03 01:15:56,301 | INFO     | mean y: 2501855.236111111
[2025-06-03 03:35:47] 2025-06-03 01:15:56,301 | INFO     | -- intersect: 1748345911.6353314
[2025-06-03 03:35:47] 2025-06-03 01:15:56,301 | INFO     | intersect: 1748345911.6353314
[2025-06-03 03:35:47] 2025-06-03 01:15:56,301 | INFO     | chi2: 5.136619150964802
[2025-06-03 03:35:47] 2025-06-03 01:15:56,302 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,303 | INFO     | sum of deviations: 11672153213.999996
[2025-06-03 03:35:47] 2025-06-03 01:15:56,304 | INFO     | mean x: 1748906502.0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,304 | INFO     | mean y: 2512301.9099526065
[2025-06-03 03:35:47] 2025-06-03 01:15:56,304 | INFO     | -- intersect: -7005607818.214761
[2025-06-03 03:35:47] 2025-06-03 01:15:56,307 | INFO     | intersect: -7005607818.214761
[2025-06-03 03:35:47] 2025-06-03 01:15:56,308 | INFO     | chi2: 4.408372086183634
[2025-06-03 03:35:47] 2025-06-03 01:15:56,308 | INFO     | current chi2=4.408372086183634 (change=14.17755615859475 %)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,308 | INFO     | right removable region: 210
[2025-06-03 03:35:47] 2025-06-03 01:15:56,309 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,310 | INFO     | sum of deviations: -71216423411.0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,311 | INFO     | mean x: 1748906807.0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,311 | INFO     | mean y: 2550716.4218009477
[2025-06-03 03:35:47] 2025-06-03 01:15:56,311 | INFO     | -- intersect: 42761870927.41166
[2025-06-03 03:35:47] 2025-06-03 01:15:56,311 | INFO     | intersect: 42761870927.41166
[2025-06-03 03:35:47] 2025-06-03 01:15:56,311 | INFO     | chi2: 1.2557646900685666
[2025-06-03 03:35:47] 2025-06-03 01:15:56,311 | INFO     | current chi2=1.2557646900685666 (change=75.5527000705766 %)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,312 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 03:35:47] 2025-06-03 01:15:56,313 | INFO     | sum of deviations: -83832820665.5
[2025-06-03 03:35:47] 2025-06-03 01:15:56,314 | INFO     | mean x: 1748906959.5
[2025-06-03 03:35:47] 2025-06-03 01:15:56,314 | INFO     | mean y: 2560151.0922330096
[2025-06-03 03:35:47] 2025-06-03 01:15:56,317 | INFO     | -- intersect: 54091806956.632355
[2025-06-03 03:35:47] 2025-06-03 01:15:56,317 | INFO     | intersect: 54091806956.632355
[2025-06-03 03:35:47] 2025-06-03 01:15:56,318 | INFO     | chi2: 1.002483923965276
[2025-06-03 03:35:47] 2025-06-03 01:15:56,318 | INFO     | current chi2=1.002483923965276 (change=20.16944480971678 %)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,318 | INFO     | left removable region: 20
[2025-06-03 03:35:47] 2025-06-03 01:15:56,319 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 03:35:47] 2025-06-03 01:15:56,320 | INFO     | sum of deviations: -58049415817.5
[2025-06-03 03:35:47] 2025-06-03 01:15:56,320 | INFO     | mean x: 1748907081.5
[2025-06-03 03:35:47] 2025-06-03 01:15:56,320 | INFO     | mean y: 2564764.0263157897
[2025-06-03 03:35:47] 2025-06-03 01:15:56,320 | INFO     | -- intersect: 47737616046.19415
[2025-06-03 03:35:47] 2025-06-03 01:15:56,320 | INFO     | intersect: 47737616046.19415
[2025-06-03 03:35:47] 2025-06-03 01:15:56,320 | INFO     | chi2: 0.2058087494150641
[2025-06-03 03:35:47] 2025-06-03 01:15:56,321 | INFO     | -- intersect: 47737616046.19415
[2025-06-03 03:35:47] 2025-06-03 01:15:56,321 | INFO     | current memory leak: -27.29 B/s (using 190 data points, chi2=0.21)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | ..............................
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . Timing measurements:
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . get job = 0 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . initial setup = 2 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . payload setup = 144 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . stage-in = 0 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . payload execution = 13308 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . stage-out = 6 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | . log creation = 1 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,322 | INFO     | ..............................
[2025-06-03 03:35:47] 2025-06-03 01:15:56,447 | INFO     | 
[2025-06-03 03:35:47] 2025-06-03 01:15:56,448 | INFO     | job summary report
[2025-06-03 03:35:47] 2025-06-03 01:15:56,448 | INFO     | --------------------------------------------------
[2025-06-03 03:35:47] 2025-06-03 01:15:56,448 | INFO     | PanDA job id: 6677381577
[2025-06-03 03:35:47] 2025-06-03 01:15:56,448 | INFO     | task id: 45006595
[2025-06-03 03:35:47] 2025-06-03 01:15:56,456 | INFO     | errors: (none)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,456 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | pilot state: finished 
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | transexitcode: 0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | exeerrorcode: 0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | exeerrordiag: 
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | exitcode: 0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | exitmsg: OK
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | cpuconsumptiontime: 48712 s
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | nevents: 400
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | neventsw: 0
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | pid: 4986
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | pgrp: 4986
[2025-06-03 03:35:47] 2025-06-03 01:15:56,457 | INFO     | corecount: 8
[2025-06-03 03:35:47] 2025-06-03 01:15:56,458 | INFO     | event service: False
[2025-06-03 03:35:47] 2025-06-03 01:15:56,458 | INFO     | sizes: {0: 2404949, 1: 2405204, 2: 2405232, 13: 2405232, 23: 2405288, 34: 2405316, 45: 2405472, 55: 2405734, 13456: 2435182, 13457: 2435209, 13463: 2444208, 13466:
[2025-06-03 03:35:47] 2025-06-03 01:15:56,458 | INFO     | --------------------------------------------------
[2025-06-03 03:35:47] 2025-06-03 01:15:56,458 | INFO     | 
[2025-06-03 03:35:47] 2025-06-03 01:15:56,458 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 03:35:47] 2025-06-03 01:15:56,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:35:47] 2025-06-03 01:15:56,929 | INFO     | job 6677381577 has completed (purged errors)
[2025-06-03 03:35:47] 2025-06-03 01:15:56,929 | INFO     | overall cleanup function is called
[2025-06-03 03:35:47] 2025-06-03 01:15:57,938 | INFO     | --- collectZombieJob: --- 10, [4986]
[2025-06-03 03:35:47] 2025-06-03 01:15:57,938 | INFO     | zombie collector waiting for pid 4986
[2025-06-03 03:35:47] 2025-06-03 01:15:57,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:35:47] 2025-06-03 01:15:57,939 | INFO     | collected zombie processes
[2025-06-03 03:35:47] 2025-06-03 01:15:57,939 | INFO     | will attempt to kill all subprocesses of pid=4986
[2025-06-03 03:35:47] 2025-06-03 01:15:58,053 | INFO     | process IDs to be killed: [4986] (in reverse order)
[2025-06-03 03:35:47] 2025-06-03 01:15:58,837 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:35:47] 2025-06-03 01:15:58,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:35:47] 2025-06-03 01:15:58,841 | INFO     | did not find any defunct processes belonging to 4986
[2025-06-03 03:35:47] 2025-06-03 01:15:58,845 | INFO     | did not find any defunct processes belonging to 4986
[2025-06-03 03:35:47] 2025-06-03 01:15:58,845 | INFO     | ready for new job
[2025-06-03 03:35:47] 2025-06-03 01:15:58,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:35:47] 2025-06-03 01:15:58,848 | INFO     | **************************************
[2025-06-03 03:35:47] 2025-06-03 01:15:58,848 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:35:47] 2025-06-03 01:15:58,848 | INFO     | **************************************
[2025-06-03 03:35:47] 2025-06-03 01:15:58,848 | INFO     | 
[2025-06-03 03:35:47] 2025-06-03 01:15:58,849 | INFO     | pilot is running in a VM
[2025-06-03 03:35:47] 2025-06-03 01:15:58,849 | INFO     | architecture information:
[2025-06-03 03:35:47] 2025-06-03 01:15:58,856 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:35:47] 2025-06-03 01:15:59,029 | INFO     | cat /etc/os-release:
[2025-06-03 03:35:47] NAME="CentOS Linux"
[2025-06-03 03:35:47] VERSION="7 (Core)"
[2025-06-03 03:35:47] ID="centos"
[2025-06-03 03:35:47] ID_LIKE="rhel fedora"
[2025-06-03 03:35:47] VERSION_ID="7"
[2025-06-03 03:35:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:35:47] ANSI_COLOR="0;31"
[2025-06-03 03:35:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:35:47] HOME_URL="https://www.centos.org/"
[2025-06-03 03:35:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:35:47] 
[2025-06-03 03:35:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:35:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:35:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:35:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:35:47] 
[2025-06-03 03:35:47] 2025-06-03 01:15:59,029 | INFO     | **************************************
[2025-06-03 03:35:47] 2025-06-03 01:15:59,533 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 03:35:47] 2025-06-03 01:15:59,812 | INFO     | sufficient remaining disk space (497114152960 B)
[2025-06-03 03:35:47] 2025-06-03 01:15:59,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:35:47] 2025-06-03 01:15:59,813 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:35:47] 2025-06-03 01:15:59,813 | INFO     | update_server=False
[2025-06-03 03:35:47] 2025-06-03 01:15:59,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:35:47] 2025-06-03 01:15:59,814 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 03:35:47] 2025-06-03 01:15:59,815 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:35:47] 2025-06-03 01:15:59,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:35:47] 2025-06-03 01:15:59,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:35:47] 2025-06-03 01:15:59,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:35:47] 2025-06-03 01:16:00,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:35:47] 2025-06-03 01:16:00,472 | INFO     | aborting loop
[2025-06-03 03:35:47] 2025-06-03 01:16:00,819 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:00,887 | INFO     | all data control threads have been joined
[2025-06-03 03:35:47] 2025-06-03 01:16:00,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:35:47] 2025-06-03 01:16:01,014 | INFO     | all payload control threads have been joined
[2025-06-03 03:35:47] 2025-06-03 01:16:01,033 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:01,063 | INFO     | all job control threads have been joined
[2025-06-03 03:35:47] 2025-06-03 01:16:01,149 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:01,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:35:47] 2025-06-03 01:16:01,478 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:01,569 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:01,739 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:01,746 | INFO     | [job] validate thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:01,893 | INFO     | [data] control thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:02,014 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:02,020 | INFO     | [payload] control thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:02,069 | INFO     | [job] control thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:02,099 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:02,278 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:02,466 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:02,991 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:03,827 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:35:47] 2025-06-03 01:16:04,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708354541376)>', '<ExcThread(monitor, started 140708052707072)>']
[2025-06-03 03:35:47] 2025-06-03 01:16:05,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:35:47] 2025-06-03 01:16:05,851 | INFO     | [monitor] control thread has ended
[2025-06-03 03:35:47] 2025-06-03 01:16:09,995 | INFO     | all workflow threads have been joined
[2025-06-03 03:35:47] 2025-06-03 01:16:09,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:35:47] 2025-06-03 01:16:09,996 | INFO     | traces error code: 0
[2025-06-03 03:35:47] 2025-06-03 01:16:09,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:35:47] 2025-06-03 01:16:10,271 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:35:47] 2025-06-03 01:16:10,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:35:47] 2025-06-03 01:16:10,389 [wrapper] pilotpid: 22787
[2025-06-03 03:35:47] 2025-06-03 01:16:10,479 [wrapper] Pilot exit status: 0
[2025-06-03 03:35:47] 2025-06-03 01:16:10,868 [wrapper] pandaids: 6677381577
[2025-06-03 03:35:47] 2025-06-03 01:16:11,567 [wrapper] cleanup supervisor_pilot 22604 22788
[2025-06-03 03:35:47] 2025-06-03 01:16:11,660 [wrapper] Test setup, not cleaning
[2025-06-03 03:35:47] 2025-06-03 01:16:11,766 [wrapper] apfmon messages muted
[2025-06-03 03:35:47] 2025-06-03 01:16:11,869 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:35:47] 2025-06-03 01:16:11,965 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:35:47]  *** Error codes and diagnostics ***
[2025-06-03 03:35:47]     "exeErrorCode": 0,
[2025-06-03 03:35:47]     "exeErrorDiag": "",
[2025-06-03 03:35:47]     "pilotErrorCode": 0,
[2025-06-03 03:35:47]     "pilotErrorDiag": "",
[2025-06-03 03:35:47]  *** Listing of results directory ***
[2025-06-03 03:35:47] total 388560
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 03:35:47] -rwx------. 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:57 queuedata.json
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:35:47] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:27 run_atlas
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:27 job.xml
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc      6392 Jun  2 23:27 init_data.xml
[2025-06-03 03:35:47] -rw-r--r--. 2 boinc boinc 213923291 Jun  2 23:27 EVNT.45006593._000098.pool.root.1
[2025-06-03 03:35:47] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:27 start_atlas.sh
[2025-06-03 03:35:47] drwxrwx--x. 2 boinc boinc        68 Jun  2 23:27 shared
[2025-06-03 03:35:47] -rw-r--r--. 2 boinc boinc    508880 Jun  2 23:27 input.tar.gz
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:27 boinc_lockfile
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc      2520 Jun  2 23:27 pandaJob.out
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc    987975 Jun  2 23:27 agis_schedconf.cvmfs.json
[2025-06-03 03:35:47] drwx------. 4 boinc boinc      4096 Jun  2 23:27 pilot3
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc 176999523 Jun  3 03:12 HITS.45006595._002451.pool.root.1
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc       531 Jun  3 03:12 boinc_task_state.xml
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc      1018 Jun  3 03:14 memory_monitor_summary.json
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc   1603667 Jun  3 03:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc    396534 Jun  3 03:14 log.45006595._002451.job.log.tgz.1
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc        95 Jun  3 03:15 pilot_heartbeat.json
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc      7693 Jun  3 03:15 heartbeat.json
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc      4540 Jun  3 03:16 pilotlog.txt
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc   1172430 Jun  3 03:16 log.45006595._002451.job.log.1
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc       357 Jun  3 03:16 output.list
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc       620 Jun  3 03:16 runtime_log
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc   1587200 Jun  3 03:16 result.tar.gz
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc       656 Jun  3 03:16 XFpLDmohMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVCfKDmz2jHUn.diag
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc      8673 Jun  3 03:16 runtime_log.err
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:35 boinc_mmap_file
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:35 wrapper_checkpoint.txt
[2025-06-03 03:35:47] -rw-r--r--. 1 boinc boinc     20849 Jun  3 03:35 stderr.txt
[2025-06-03 03:35:47] HITS file was successfully produced:
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc 176999523 Jun  3 03:12 shared/HITS.pool.root.1
[2025-06-03 03:35:47]  *** Contents of shared directory: ***
[2025-06-03 03:35:47] total 383832
[2025-06-03 03:35:47] -rw-r--r--. 2 boinc boinc 213923291 Jun  2 23:27 ATLAS.root_0
[2025-06-03 03:35:47] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:27 start_atlas.sh
[2025-06-03 03:35:47] -rw-r--r--. 2 boinc boinc    508880 Jun  2 23:27 input.tar.gz
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc 176999523 Jun  3 03:12 HITS.pool.root.1
[2025-06-03 03:35:47] -rw-------. 1 boinc boinc   1587200 Jun  3 03:16 result.tar.gz
03:35:49 (14232): run_atlas exited; CPU time 48888.528702
03:35:49 (14232): called boinc_finish(0)

</stderr_txt>
]]>

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