Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:55:14 (21681): wrapper (7.7.26015): starting
18:55:14 (21681): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 18:55:14] Arguments: --nthreads 8
[2025-06-02 18:55:14] Threads: 8
[2025-06-02 18:55:14] Checking for CVMFS
[2025-06-02 18:55:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:55:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:55:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:55:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:55:16] 2.11.2.0 14321 30610 94520 146713 3 16 25024901 25165825 4632 130560 0 15505693 99.835 16156178 1835 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 18:55:16] CVMFS is ok
[2025-06-02 18:55:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:55:16] Checking for apptainer binary...
[2025-06-02 18:55:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:55:16] Running /usr/bin/apptainer --version
[2025-06-02 18:55:16] apptainer version 1.3.2-1.el7
[2025-06-02 18:55:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:55:31] cg-vwn391.simple-grid.lan
[2025-06-02 18:55:31] apptainer works
[2025-06-02 18:55:31] Set ATHENA_PROC_NUMBER=8
[2025-06-02 18:55:31] Set ATHENA_CORE_NUMBER=8
[2025-06-02 18:55:31] Starting ATLAS job with PandaID=6677380732
[2025-06-02 18:55:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:01:40]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:01:40] 2025-06-02 20:40:39,608 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 23:01:40] 2025-06-02 20:40:39,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 23:01:40] 2025-06-02 20:40:39,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 23:01:40] 2025-06-02 20:40:39,613 | INFO     | fitting pss+swap vs Time
[2025-06-02 23:01:40] 2025-06-02 20:40:39,614 | INFO     | sum of square deviations: 2830787960.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,615 | INFO     | sum of deviations: 99202981606.99997
[2025-06-02 23:01:40] 2025-06-02 20:40:39,615 | INFO     | mean x: 1748890354.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,615 | INFO     | mean y: 2398928.8038277514
[2025-06-02 23:01:40] 2025-06-02 20:40:39,616 | INFO     | -- intersect: -61286238748.07878
[2025-06-02 23:01:40] 2025-06-02 20:40:39,616 | INFO     | intersect: -61286238748.07878
[2025-06-02 23:01:40] 2025-06-02 20:40:39,616 | INFO     | chi2: 8.154879408468624
[2025-06-02 23:01:40] 2025-06-02 20:40:39,617 | INFO     | sum of square deviations: 2632440055.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,618 | INFO     | sum of deviations: 110345757514.5
[2025-06-02 23:01:40] 2025-06-02 20:40:39,618 | INFO     | mean x: 1748890201.5
[2025-06-02 23:01:40] 2025-06-02 20:40:39,618 | INFO     | mean y: 2407290.25
[2025-06-02 23:01:40] 2025-06-02 20:40:39,618 | INFO     | -- intersect: -73306997696.06946
[2025-06-02 23:01:40] 2025-06-02 20:40:39,619 | INFO     | intersect: -73306997696.06946
[2025-06-02 23:01:40] 2025-06-02 20:40:39,619 | INFO     | chi2: 7.467794227840284
[2025-06-02 23:01:40] 2025-06-02 20:40:39,619 | INFO     | current chi2=7.467794227840284 (change=8.42544869412563 %)
[2025-06-02 23:01:40] 2025-06-02 20:40:39,619 | INFO     | right removable region: 203
[2025-06-02 23:01:40] 2025-06-02 20:40:39,620 | INFO     | sum of square deviations: 2632440055.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,626 | INFO     | sum of deviations: 26074434139.999996
[2025-06-02 23:01:40] 2025-06-02 20:40:39,627 | INFO     | mean x: 1748890506.5
[2025-06-02 23:01:40] 2025-06-02 20:40:39,627 | INFO     | mean y: 2455124.9411764704
[2025-06-02 23:01:40] 2025-06-02 20:40:39,627 | INFO     | -- intersect: -17320382006.02836
[2025-06-02 23:01:40] 2025-06-02 20:40:39,627 | INFO     | intersect: -17320382006.02836
[2025-06-02 23:01:40] 2025-06-02 20:40:39,627 | INFO     | chi2: 2.9046613846198914
[2025-06-02 23:01:40] 2025-06-02 20:40:39,628 | INFO     | current chi2=2.9046613846198914 (change=64.3813079368963 %)
[2025-06-02 23:01:40] 2025-06-02 20:40:39,628 | INFO     | sum of square deviations: 2443580700.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,629 | INFO     | sum of deviations: -18157480759.000004
[2025-06-02 23:01:40] 2025-06-02 20:40:39,630 | INFO     | mean x: 1748890659.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,630 | INFO     | mean y: 2490667.472361809
[2025-06-02 23:01:40] 2025-06-02 20:40:39,630 | INFO     | -- intersect: 12997947903.808914
[2025-06-02 23:01:40] 2025-06-02 20:40:39,630 | INFO     | intersect: 12997947903.808914
[2025-06-02 23:01:40] 2025-06-02 20:40:39,630 | INFO     | chi2: 0.9177542399145472
[2025-06-02 23:01:40] 2025-06-02 20:40:39,630 | INFO     | current chi2=0.9177542399145472 (change=68.40408851875014 %)
[2025-06-02 23:01:40] 2025-06-02 20:40:39,631 | INFO     | sum of square deviations: 2263977332.5
[2025-06-02 23:01:40] 2025-06-02 20:40:39,632 | INFO     | sum of deviations: -20604088675.499996
[2025-06-02 23:01:40] 2025-06-02 20:40:39,632 | INFO     | mean x: 1748890811.5
[2025-06-02 23:01:40] 2025-06-02 20:40:39,632 | INFO     | mean y: 2492687.5515463916
[2025-06-02 23:01:40] 2025-06-02 20:40:39,632 | INFO     | -- intersect: 15918862894.369041
[2025-06-02 23:01:40] 2025-06-02 20:40:39,632 | INFO     | intersect: 15918862894.369041
[2025-06-02 23:01:40] 2025-06-02 20:40:39,633 | INFO     | chi2: 0.8854403924282168
[2025-06-02 23:01:40] 2025-06-02 20:40:39,633 | INFO     | current chi2=0.8854403924282168 (change=3.5209695669005177 %)
[2025-06-02 23:01:40] 2025-06-02 20:40:39,633 | INFO     | left removable region: 30
[2025-06-02 23:01:40] 2025-06-02 20:40:39,633 | INFO     | sum of square deviations: 1605470102.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,634 | INFO     | sum of deviations: 5207473924.999999
[2025-06-02 23:01:40] 2025-06-02 20:40:39,635 | INFO     | mean x: 1748891086.0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,635 | INFO     | mean y: 2491879.583815029
[2025-06-02 23:01:40] 2025-06-02 20:40:39,635 | INFO     | -- intersect: -5670179767.595779
[2025-06-02 23:01:40] 2025-06-02 20:40:39,635 | INFO     | intersect: -5670179767.595779
[2025-06-02 23:01:40] 2025-06-02 20:40:39,635 | INFO     | chi2: 0.0011275312070495429
[2025-06-02 23:01:40] 2025-06-02 20:40:39,635 | INFO     | -- intersect: -5670179767.595779
[2025-06-02 23:01:40] 2025-06-02 20:40:39,635 | INFO     | current memory leak: 3.24 B/s (using 173 data points, chi2=0.00)
[2025-06-02 23:01:40] 2025-06-02 20:40:39,636 | INFO     | ..............................
[2025-06-02 23:01:40] 2025-06-02 20:40:39,642 | INFO     | . Timing measurements:
[2025-06-02 23:01:40] 2025-06-02 20:40:39,642 | INFO     | . get job = 0 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,642 | INFO     | . initial setup = 11 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,642 | INFO     | . payload setup = 145 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,642 | INFO     | . stage-in = 0 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,642 | INFO     | . payload execution = 12885 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,642 | INFO     | . stage-out = 3 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,643 | INFO     | . log creation = 1 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,643 | INFO     | ..............................
[2025-06-02 23:01:40] 2025-06-02 20:40:39,796 | INFO     | 
[2025-06-02 23:01:40] 2025-06-02 20:40:39,796 | INFO     | job summary report
[2025-06-02 23:01:40] 2025-06-02 20:40:39,796 | INFO     | --------------------------------------------------
[2025-06-02 23:01:40] 2025-06-02 20:40:39,796 | INFO     | PanDA job id: 6677380732
[2025-06-02 23:01:40] 2025-06-02 20:40:39,796 | INFO     | task id: 45006595
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | errors: (none)
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | pilot state: finished 
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | transexitcode: 0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | exeerrorcode: 0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | exeerrordiag: 
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | exitcode: 0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | exitmsg: OK
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | cpuconsumptiontime: 47316 s
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | nevents: 400
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | neventsw: 0
[2025-06-02 23:01:40] 2025-06-02 20:40:39,797 | INFO     | pid: 5630
[2025-06-02 23:01:40] 2025-06-02 20:40:39,798 | INFO     | pgrp: 5630
[2025-06-02 23:01:40] 2025-06-02 20:40:39,798 | INFO     | corecount: 8
[2025-06-02 23:01:40] 2025-06-02 20:40:39,798 | INFO     | event service: False
[2025-06-02 23:01:40] 2025-06-02 20:40:39,798 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 23: 2405233, 33: 2405261, 44: 2405317, 55: 2405473, 65: 2405501, 76: 2405529, 87: 2405585, 95: 2405819, 98: 2406127, 1
[2025-06-02 23:01:40] 2025-06-02 20:40:39,798 | INFO     | --------------------------------------------------
[2025-06-02 23:01:40] 2025-06-02 20:40:39,798 | INFO     | 
[2025-06-02 23:01:40] 2025-06-02 20:40:39,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-06-02 23:01:40] 2025-06-02 20:40:40,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:01:40] 2025-06-02 20:40:40,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:01:40] 2025-06-02 20:40:40,293 | INFO     | job 6677380732 has completed (purged errors)
[2025-06-02 23:01:40] 2025-06-02 20:40:40,293 | INFO     | overall cleanup function is called
[2025-06-02 23:01:40] 2025-06-02 20:40:41,303 | INFO     | --- collectZombieJob: --- 10, [5630]
[2025-06-02 23:01:40] 2025-06-02 20:40:41,303 | INFO     | zombie collector waiting for pid 5630
[2025-06-02 23:01:40] 2025-06-02 20:40:41,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:01:40] 2025-06-02 20:40:41,303 | INFO     | collected zombie processes
[2025-06-02 23:01:40] 2025-06-02 20:40:41,304 | INFO     | will attempt to kill all subprocesses of pid=5630
[2025-06-02 23:01:40] 2025-06-02 20:40:41,417 | INFO     | process IDs to be killed: [5630] (in reverse order)
[2025-06-02 23:01:40] 2025-06-02 20:40:42,324 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:01:40] 2025-06-02 20:40:42,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:01:40] 2025-06-02 20:40:42,328 | INFO     | did not find any defunct processes belonging to 5630
[2025-06-02 23:01:40] 2025-06-02 20:40:42,332 | INFO     | did not find any defunct processes belonging to 5630
[2025-06-02 23:01:40] 2025-06-02 20:40:42,332 | INFO     | ready for new job
[2025-06-02 23:01:40] 2025-06-02 20:40:42,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:01:40] 2025-06-02 20:40:42,335 | INFO     | **************************************
[2025-06-02 23:01:40] 2025-06-02 20:40:42,335 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:01:40] 2025-06-02 20:40:42,335 | INFO     | **************************************
[2025-06-02 23:01:40] 2025-06-02 20:40:42,335 | INFO     | 
[2025-06-02 23:01:40] 2025-06-02 20:40:42,336 | INFO     | pilot is running in a VM
[2025-06-02 23:01:40] 2025-06-02 20:40:42,336 | INFO     | architecture information:
[2025-06-02 23:01:40] 2025-06-02 20:40:42,347 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:01:40] 2025-06-02 20:40:42,630 | INFO     | cat /etc/os-release:
[2025-06-02 23:01:40] NAME="CentOS Linux"
[2025-06-02 23:01:40] VERSION="7 (Core)"
[2025-06-02 23:01:40] ID="centos"
[2025-06-02 23:01:40] ID_LIKE="rhel fedora"
[2025-06-02 23:01:40] VERSION_ID="7"
[2025-06-02 23:01:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:01:40] ANSI_COLOR="0;31"
[2025-06-02 23:01:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:01:40] HOME_URL="https://www.centos.org/"
[2025-06-02 23:01:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:01:40] 
[2025-06-02 23:01:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:01:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:01:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:01:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:01:40] 
[2025-06-02 23:01:40] 2025-06-02 20:40:42,631 | INFO     | **************************************
[2025-06-02 23:01:40] 2025-06-02 20:40:43,134 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-06-02 23:01:40] 2025-06-02 20:40:43,335 | INFO     | sufficient remaining disk space (496559456256 B)
[2025-06-02 23:01:40] 2025-06-02 20:40:43,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:01:40] 2025-06-02 20:40:43,335 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:01:40] 2025-06-02 20:40:43,335 | INFO     | update_server=False
[2025-06-02 23:01:40] 2025-06-02 20:40:43,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:01:40] 2025-06-02 20:40:43,336 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 23:01:40] 2025-06-02 20:40:43,337 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:01:40] 2025-06-02 20:40:43,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:01:40] 2025-06-02 20:40:43,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:01:40] 2025-06-02 20:40:43,370 | INFO     | all data control threads have been joined
[2025-06-02 23:01:40] 2025-06-02 20:40:43,562 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-02 23:01:40] 2025-06-02 20:40:43,562 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-02 23:01:40] 2025-06-02 20:40:43,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:01:40] 2025-06-02 20:40:43,562 | INFO     | will abort loop
[2025-06-02 23:01:40] 2025-06-02 20:40:44,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:01:40] 2025-06-02 20:40:44,342 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:44,376 | INFO     | [data] control thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:44,430 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:44,568 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:44,757 | INFO     | all payload control threads have been joined
[2025-06-02 23:01:40] 2025-06-02 20:40:44,778 | INFO     | all job control threads have been joined
[2025-06-02 23:01:40] 2025-06-02 20:40:44,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:01:40] 2025-06-02 20:40:44,831 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,245 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,245 | INFO     | [job] validate thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:01:40] 2025-06-02 20:40:45,374 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,467 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,650 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,740 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,763 | INFO     | [payload] control thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,784 | INFO     | [job] control thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:45,819 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:46,237 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:49,336 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:01:40] 2025-06-02 20:40:50,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611841337152)>', '<ExcThread(monitor, started 140610585491200)>']
[2025-06-02 23:01:40] 2025-06-02 20:40:50,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:01:40] 2025-06-02 20:40:50,379 | INFO     | [monitor] control thread has ended
[2025-06-02 23:01:40] 2025-06-02 20:40:55,075 | INFO     | all workflow threads have been joined
[2025-06-02 23:01:40] 2025-06-02 20:40:55,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:01:40] 2025-06-02 20:40:55,075 | INFO     | traces error code: 0
[2025-06-02 23:01:40] 2025-06-02 20:40:55,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:01:40] 2025-06-02 20:40:55,575 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:01:40] 2025-06-02 20:40:55,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:01:40] 2025-06-02 20:40:55,694 [wrapper] pilotpid: 30996
[2025-06-02 23:01:40] 2025-06-02 20:40:55,766 [wrapper] Pilot exit status: 0
[2025-06-02 23:01:40] 2025-06-02 20:40:56,278 [wrapper] pandaids: 6677380732
[2025-06-02 23:01:40] 2025-06-02 20:40:57,397 [wrapper] cleanup supervisor_pilot  4475 30997
[2025-06-02 23:01:40] 2025-06-02 20:40:57,530 [wrapper] Test setup, not cleaning
[2025-06-02 23:01:40] 2025-06-02 20:40:57,648 [wrapper] apfmon messages muted
[2025-06-02 23:01:40] 2025-06-02 20:40:57,752 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:01:40] 2025-06-02 20:40:57,892 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:01:40]  *** Error codes and diagnostics ***
[2025-06-02 23:01:40]     "exeErrorCode": 0,
[2025-06-02 23:01:40]     "exeErrorDiag": "",
[2025-06-02 23:01:40]     "pilotErrorCode": 0,
[2025-06-02 23:01:40]     "pilotErrorDiag": "",
[2025-06-02 23:01:40]  *** Listing of results directory ***
[2025-06-02 23:01:40] total 389836
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-02 23:01:40] -rwx------. 1 boinc boinc     37140 Jun  2 17:51 runpilot2-wrapper.sh
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:53 queuedata.json
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:01:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:55 run_atlas
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:55 job.xml
[2025-06-02 23:01:40] -rw-r--r--. 2 boinc boinc 217406232 Jun  2 18:55 EVNT.45006593._000095.pool.root.1
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc      6393 Jun  2 18:55 init_data.xml
[2025-06-02 23:01:40] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:55 start_atlas.sh
[2025-06-02 23:01:40] drwxrwx--x. 2 boinc boinc        68 Jun  2 18:55 shared
[2025-06-02 23:01:40] -rw-r--r--. 2 boinc boinc    508875 Jun  2 18:55 input.tar.gz
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:55 boinc_lockfile
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc      2521 Jun  2 18:55 pandaJob.out
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc    988298 Jun  2 18:58 agis_schedconf.cvmfs.json
[2025-06-02 23:01:40] drwx------. 4 boinc boinc      4096 Jun  2 18:58 pilot3
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc 174925466 Jun  2 22:37 HITS.45006595._002364.pool.root.1
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc       531 Jun  2 22:38 boinc_task_state.xml
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc      1014 Jun  2 22:38 memory_monitor_summary.json
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc   1603667 Jun  2 22:39 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc    375892 Jun  2 22:39 log.45006595._002364.job.log.tgz.1
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc        95 Jun  2 22:40 pilot_heartbeat.json
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc      7685 Jun  2 22:40 heartbeat.json
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc      4726 Jun  2 22:40 pilotlog.txt
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc   1143539 Jun  2 22:40 log.45006595._002364.job.log.1
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc       357 Jun  2 22:40 output.list
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc       620 Jun  2 22:40 runtime_log
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc   1536000 Jun  2 22:40 result.tar.gz
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc      8673 Jun  2 22:41 runtime_log.err
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc       657 Jun  2 22:41 7fwNDm2cMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgBfKDmXbk7Km.diag
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc      8192 Jun  2 23:01 boinc_mmap_file
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc        28 Jun  2 23:01 wrapper_checkpoint.txt
[2025-06-02 23:01:40] -rw-r--r--. 1 boinc boinc     20531 Jun  2 23:01 stderr.txt
[2025-06-02 23:01:40] HITS file was successfully produced:
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc 174925466 Jun  2 22:37 shared/HITS.pool.root.1
[2025-06-02 23:01:40]  *** Contents of shared directory: ***
[2025-06-02 23:01:40] total 385156
[2025-06-02 23:01:40] -rw-r--r--. 2 boinc boinc 217406232 Jun  2 18:55 ATLAS.root_0
[2025-06-02 23:01:40] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:55 start_atlas.sh
[2025-06-02 23:01:40] -rw-r--r--. 2 boinc boinc    508875 Jun  2 18:55 input.tar.gz
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc 174925466 Jun  2 22:37 HITS.pool.root.1
[2025-06-02 23:01:40] -rw-------. 1 boinc boinc   1536000 Jun  2 22:40 result.tar.gz
23:01:42 (21681): run_atlas exited; CPU time 47481.533214
23:01:42 (21681): called boinc_finish(0)

</stderr_txt>
]]>

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