Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:40 (17746): wrapper (7.7.26015): starting
18:42:40 (17746): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 18:42:40] Arguments: --nthreads 8
[2025-06-02 18:42:40] Threads: 8
[2025-06-02 18:42:40] Checking for CVMFS
[2025-06-02 18:42:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:42:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:42:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:42:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:42:43] 2.11.2.0 3973 30724 95172 146713 0 16 23068402 25165824 4633 130560 0 16565628 99.744 20041204 2654 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 18:42:43] CVMFS is ok
[2025-06-02 18:42:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:42:43] Checking for apptainer binary...
[2025-06-02 18:42:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:42:43] Running /usr/bin/apptainer --version
[2025-06-02 18:42:43] apptainer version 1.3.2-1.el7
[2025-06-02 18:42:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:42:54] cg-vwn471.simple-grid.lan
[2025-06-02 18:42:54] apptainer works
[2025-06-02 18:42:54] Set ATHENA_PROC_NUMBER=8
[2025-06-02 18:42:54] Set ATHENA_CORE_NUMBER=8
[2025-06-02 18:42:54] Starting ATLAS job with PandaID=6677381715
[2025-06-02 18:42:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 22:48:04]  *** The last 200 lines of the pilot log: ***
[2025-06-02 22:48:04] 2025-06-02 20:12:39,832 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6677381715/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 22:48:04] 2025-06-02 20:12:39,833 | INFO     | extracted standard info from prmon json
[2025-06-02 22:48:04] 2025-06-02 20:12:39,833 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 22:48:04] 2025-06-02 20:12:39,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 22:48:04] 2025-06-02 20:12:39,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 22:48:04] 2025-06-02 20:12:39,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 22:48:04] 2025-06-02 20:12:39,837 | INFO     | fitting pss+swap vs Time
[2025-06-02 22:48:04] 2025-06-02 20:12:39,844 | INFO     | sum of square deviations: 2229146912.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,846 | INFO     | sum of deviations: 62541872233.999985
[2025-06-02 22:48:04] 2025-06-02 20:12:39,846 | INFO     | mean x: 1748889156.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,846 | INFO     | mean y: 2421427.3005181346
[2025-06-02 22:48:04] 2025-06-02 20:12:39,846 | INFO     | -- intersect: -49065139601.16707
[2025-06-02 22:48:04] 2025-06-02 20:12:39,846 | INFO     | intersect: -49065139601.16707
[2025-06-02 22:48:04] 2025-06-02 20:12:39,847 | INFO     | chi2: 7.793593546425649
[2025-06-02 22:48:04] 2025-06-02 20:12:39,847 | INFO     | sum of square deviations: 2060343747.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,848 | INFO     | sum of deviations: 73551535283.49998
[2025-06-02 22:48:04] 2025-06-02 20:12:39,848 | INFO     | mean x: 1748889003.5
[2025-06-02 22:48:04] 2025-06-02 20:12:39,848 | INFO     | mean y: 2431131.888297872
[2025-06-02 22:48:04] 2025-06-02 20:12:39,848 | INFO     | -- intersect: -62430583473.15245
[2025-06-02 22:48:04] 2025-06-02 20:12:39,849 | INFO     | intersect: -62430583473.15245
[2025-06-02 22:48:04] 2025-06-02 20:12:39,849 | INFO     | chi2: 7.115710625408358
[2025-06-02 22:48:04] 2025-06-02 20:12:39,849 | INFO     | current chi2=7.115710625408358 (change=8.697950656256465 %)
[2025-06-02 22:48:04] 2025-06-02 20:12:39,849 | INFO     | right removable region: 187
[2025-06-02 22:48:04] 2025-06-02 20:12:39,849 | INFO     | sum of square deviations: 2060343747.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,851 | INFO     | sum of deviations: -5882228078.499994
[2025-06-02 22:48:04] 2025-06-02 20:12:39,851 | INFO     | mean x: 1748889308.5
[2025-06-02 22:48:04] 2025-06-02 20:12:39,851 | INFO     | mean y: 2483207.2074468085
[2025-06-02 22:48:04] 2025-06-02 20:12:39,851 | INFO     | -- intersect: 4995516923.851206
[2025-06-02 22:48:04] 2025-06-02 20:12:39,851 | INFO     | intersect: 4995516923.851206
[2025-06-02 22:48:04] 2025-06-02 20:12:39,852 | INFO     | chi2: 2.465094365941646
[2025-06-02 22:48:04] 2025-06-02 20:12:39,852 | INFO     | current chi2=2.465094365941646 (change=68.37024729019639 %)
[2025-06-02 22:48:04] 2025-06-02 20:12:39,852 | INFO     | sum of square deviations: 1900284932.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,853 | INFO     | sum of deviations: -39141308372.99999
[2025-06-02 22:48:04] 2025-06-02 20:12:39,853 | INFO     | mean x: 1748889461.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,854 | INFO     | mean y: 2514648.7213114756
[2025-06-02 22:48:04] 2025-06-02 20:12:39,854 | INFO     | -- intersect: 36025439711.46172
[2025-06-02 22:48:04] 2025-06-02 20:12:39,854 | INFO     | intersect: 36025439711.46172
[2025-06-02 22:48:04] 2025-06-02 20:12:39,854 | INFO     | chi2: 0.9597110404414236
[2025-06-02 22:48:04] 2025-06-02 20:12:39,854 | INFO     | current chi2=0.9597110404414236 (change=61.06797964000775 %)
[2025-06-02 22:48:04] 2025-06-02 20:12:39,855 | INFO     | sum of square deviations: 1748737904.5
[2025-06-02 22:48:04] 2025-06-02 20:12:39,856 | INFO     | sum of deviations: -35504972804.5
[2025-06-02 22:48:04] 2025-06-02 20:12:39,856 | INFO     | mean x: 1748889613.5
[2025-06-02 22:48:04] 2025-06-02 20:12:39,856 | INFO     | mean y: 2510948.612359551
[2025-06-02 22:48:04] 2025-06-02 20:12:39,856 | INFO     | -- intersect: 35510563931.05403
[2025-06-02 22:48:04] 2025-06-02 20:12:39,856 | INFO     | intersect: 35510563931.05403
[2025-06-02 22:48:04] 2025-06-02 20:12:39,857 | INFO     | chi2: 0.9484479669094755
[2025-06-02 22:48:04] 2025-06-02 20:12:39,857 | INFO     | current chi2=0.9484479669094755 (change=1.1735900763179306 %)
[2025-06-02 22:48:04] 2025-06-02 20:12:39,857 | INFO     | left removable region: 30
[2025-06-02 22:48:04] 2025-06-02 20:12:39,857 | INFO     | sum of square deviations: 1199940638.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,858 | INFO     | sum of deviations: -4767073810.999997
[2025-06-02 22:48:04] 2025-06-02 20:12:39,858 | INFO     | mean x: 1748889888.0
[2025-06-02 22:48:04] 2025-06-02 20:12:39,858 | INFO     | mean y: 2502305.1401273888
[2025-06-02 22:48:04] 2025-06-02 20:12:39,858 | INFO     | -- intersect: 6950418659.821932
[2025-06-02 22:48:04] 2025-06-02 20:12:39,859 | INFO     | intersect: 6950418659.821932
[2025-06-02 22:48:04] 2025-06-02 20:12:39,859 | INFO     | chi2: 0.07110336581203637
[2025-06-02 22:48:04] 2025-06-02 20:12:39,859 | INFO     | -- intersect: 6950418659.821932
[2025-06-02 22:48:04] 2025-06-02 20:12:39,859 | INFO     | current memory leak: -3.97 B/s (using 157 data points, chi2=0.07)
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | ..............................
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . Timing measurements:
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . get job = 0 s
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . initial setup = 10 s
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . payload setup = 187 s
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . stage-in = 0 s
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . payload execution = 11893 s
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . stage-out = 3 s
[2025-06-02 22:48:04] 2025-06-02 20:12:39,860 | INFO     | . log creation = 1 s
[2025-06-02 22:48:04] 2025-06-02 20:12:39,861 | INFO     | ..............................
[2025-06-02 22:48:04] 2025-06-02 20:12:40,033 | INFO     | 
[2025-06-02 22:48:04] 2025-06-02 20:12:40,033 | INFO     | job summary report
[2025-06-02 22:48:04] 2025-06-02 20:12:40,033 | INFO     | --------------------------------------------------
[2025-06-02 22:48:04] 2025-06-02 20:12:40,033 | INFO     | PanDA job id: 6677381715
[2025-06-02 22:48:04] 2025-06-02 20:12:40,033 | INFO     | task id: 45006595
[2025-06-02 22:48:04] 2025-06-02 20:12:40,033 | INFO     | errors: (none)
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | pilot state: finished 
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | transexitcode: 0
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | exeerrorcode: 0
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | exeerrordiag: 
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | exitcode: 0
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | exitmsg: OK
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | cpuconsumptiontime: 43837 s
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | nevents: 400
[2025-06-02 22:48:04] 2025-06-02 20:12:40,034 | INFO     | neventsw: 0
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | pid: 31601
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | pgrp: 31601
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | corecount: 8
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | event service: False
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | sizes: {0: 2404951, 1: 2405206, 12: 2405206, 23: 2405234, 33: 2405262, 44: 2405318, 55: 2405474, 65: 2405502, 76: 2405530, 87: 2405586, 98: 2406100, 108: 2406128, 
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | --------------------------------------------------
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | 
[2025-06-02 22:48:04] 2025-06-02 20:12:40,035 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-02 22:48:04] 2025-06-02 20:12:40,621 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,623 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 22:48:04] 2025-06-02 20:12:40,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,624 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 22:48:04] 2025-06-02 20:12:40,624 | INFO     | job 6677381715 has completed (purged errors)
[2025-06-02 22:48:04] 2025-06-02 20:12:40,624 | INFO     | overall cleanup function is called
[2025-06-02 22:48:04] 2025-06-02 20:12:41,633 | INFO     | --- collectZombieJob: --- 10, [31601]
[2025-06-02 22:48:04] 2025-06-02 20:12:41,633 | INFO     | zombie collector waiting for pid 31601
[2025-06-02 22:48:04] 2025-06-02 20:12:41,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 22:48:04] 2025-06-02 20:12:41,633 | INFO     | collected zombie processes
[2025-06-02 22:48:04] 2025-06-02 20:12:41,633 | INFO     | will attempt to kill all subprocesses of pid=31601
[2025-06-02 22:48:04] 2025-06-02 20:12:41,725 | INFO     | process IDs to be killed: [31601] (in reverse order)
[2025-06-02 22:48:04] 2025-06-02 20:12:42,639 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 22:48:04] 2025-06-02 20:12:42,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 22:48:04] 2025-06-02 20:12:42,643 | INFO     | did not find any defunct processes belonging to 31601
[2025-06-02 22:48:04] 2025-06-02 20:12:42,646 | INFO     | did not find any defunct processes belonging to 31601
[2025-06-02 22:48:04] 2025-06-02 20:12:42,646 | INFO     | ready for new job
[2025-06-02 22:48:04] 2025-06-02 20:12:42,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 22:48:04] 2025-06-02 20:12:42,648 | INFO     | **************************************
[2025-06-02 22:48:04] 2025-06-02 20:12:42,648 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 22:48:04] 2025-06-02 20:12:42,649 | INFO     | **************************************
[2025-06-02 22:48:04] 2025-06-02 20:12:42,649 | INFO     | 
[2025-06-02 22:48:04] 2025-06-02 20:12:42,649 | INFO     | pilot is running in a VM
[2025-06-02 22:48:04] 2025-06-02 20:12:42,649 | INFO     | architecture information:
[2025-06-02 22:48:04] 2025-06-02 20:12:42,652 | INFO     | executing command: cat /etc/os-release
[2025-06-02 22:48:04] 2025-06-02 20:12:42,854 | INFO     | cat /etc/os-release:
[2025-06-02 22:48:04] NAME="CentOS Linux"
[2025-06-02 22:48:04] VERSION="7 (Core)"
[2025-06-02 22:48:04] ID="centos"
[2025-06-02 22:48:04] ID_LIKE="rhel fedora"
[2025-06-02 22:48:04] VERSION_ID="7"
[2025-06-02 22:48:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 22:48:04] ANSI_COLOR="0;31"
[2025-06-02 22:48:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 22:48:04] HOME_URL="https://www.centos.org/"
[2025-06-02 22:48:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 22:48:04] 
[2025-06-02 22:48:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 22:48:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 22:48:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 22:48:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 22:48:04] 
[2025-06-02 22:48:04] 2025-06-02 20:12:42,855 | INFO     | **************************************
[2025-06-02 22:48:04] 2025-06-02 20:12:43,358 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-02 22:48:04] 2025-06-02 20:12:43,643 | INFO     | sufficient remaining disk space (496859348992 B)
[2025-06-02 22:48:04] 2025-06-02 20:12:43,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 22:48:04] 2025-06-02 20:12:43,644 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 22:48:04] 2025-06-02 20:12:43,644 | INFO     | update_server=False
[2025-06-02 22:48:04] 2025-06-02 20:12:43,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 22:48:04] 2025-06-02 20:12:43,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:48:04] 2025-06-02 20:12:43,645 | INFO     | aborting loop
[2025-06-02 22:48:04] 2025-06-02 20:12:43,967 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 22:48:04] 2025-06-02 20:12:44,275 | INFO     | all data control threads have been joined
[2025-06-02 22:48:04] 2025-06-02 20:12:44,510 | INFO     | all job control threads have been joined
[2025-06-02 22:48:04] 2025-06-02 20:12:44,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 22:48:04] 2025-06-02 20:12:44,595 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 22:48:04] 2025-06-02 20:12:44,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 22:48:04] 2025-06-02 20:12:44,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 22:48:04] 2025-06-02 20:12:44,650 | INFO     | [job] retrieve thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:44,654 | INFO     | [job] job monitor thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:44,685 | INFO     | all payload control threads have been joined
[2025-06-02 22:48:04] 2025-06-02 20:12:45,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:48:04] 2025-06-02 20:12:45,062 | INFO     | [payload] validate_post thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,281 | INFO     | [data] control thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,413 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,517 | INFO     | [job] control thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,545 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,691 | INFO     | [payload] control thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,694 | INFO     | [job] validate thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,757 | INFO     | [payload] failed_post thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,967 | INFO     | [data] copytool_in thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:45,974 | INFO     | [data] copytool_out thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:46,046 | INFO     | [job] queue monitor thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:46,075 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:48,543 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 22:48:04] 2025-06-02 20:12:50,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400383072064)>', '<ExcThread(monitor, started 140399695869696)>']
[2025-06-02 22:48:04] 2025-06-02 20:12:50,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 22:48:04] 2025-06-02 20:12:50,630 | INFO     | [monitor] control thread has ended
[2025-06-02 22:48:04] 2025-06-02 20:12:55,455 | INFO     | all workflow threads have been joined
[2025-06-02 22:48:04] 2025-06-02 20:12:55,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 22:48:04] 2025-06-02 20:12:55,455 | INFO     | traces error code: 0
[2025-06-02 22:48:04] 2025-06-02 20:12:55,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 22:48:04] 2025-06-02 20:12:55,878 [wrapper] ==== pilot stdout END ====
[2025-06-02 22:48:04] 2025-06-02 20:12:55,989 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 22:48:04] 2025-06-02 20:12:56,076 [wrapper] pilotpid: 22665
[2025-06-02 22:48:04] 2025-06-02 20:12:56,189 [wrapper] Pilot exit status: 0
[2025-06-02 22:48:04] 2025-06-02 20:12:56,615 [wrapper] pandaids: 6677381715
[2025-06-02 22:48:04] 2025-06-02 20:12:57,705 [wrapper] cleanup supervisor_pilot 29198 22666
[2025-06-02 22:48:04] 2025-06-02 20:12:57,829 [wrapper] Test setup, not cleaning
[2025-06-02 22:48:04] 2025-06-02 20:12:57,920 [wrapper] apfmon messages muted
[2025-06-02 22:48:04] 2025-06-02 20:12:57,995 [wrapper] ==== wrapper stdout END ====
[2025-06-02 22:48:04] 2025-06-02 20:12:58,084 [wrapper] ==== wrapper stderr END ====
[2025-06-02 22:48:04]  *** Error codes and diagnostics ***
[2025-06-02 22:48:04]     "exeErrorCode": 0,
[2025-06-02 22:48:04]     "exeErrorDiag": "",
[2025-06-02 22:48:04]     "pilotErrorCode": 0,
[2025-06-02 22:48:04]     "pilotErrorDiag": "",
[2025-06-02 22:48:04]  *** Listing of results directory ***
[2025-06-02 22:48:04] total 394408
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:55 queuedata.json
[2025-06-02 22:48:04] -rwx------. 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 22:48:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:42 run_atlas
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:42 job.xml
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc      6393 Jun  2 18:42 init_data.xml
[2025-06-02 22:48:04] -rw-r--r--. 2 boinc boinc 217037315 Jun  2 18:42 EVNT.45006593._000104.pool.root.1
[2025-06-02 22:48:04] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:42 start_atlas.sh
[2025-06-02 22:48:04] drwxrwx--x. 2 boinc boinc        68 Jun  2 18:42 shared
[2025-06-02 22:48:04] -rw-r--r--. 2 boinc boinc    508878 Jun  2 18:42 input.tar.gz
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:42 boinc_lockfile
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc      2521 Jun  2 18:42 pandaJob.out
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc    988298 Jun  2 18:46 agis_schedconf.cvmfs.json
[2025-06-02 22:48:04] drwx------. 4 boinc boinc      4096 Jun  2 18:46 pilot3
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc 180161093 Jun  2 22:09 HITS.45006595._002589.pool.root.1
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc       531 Jun  2 22:09 boinc_task_state.xml
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc      1014 Jun  2 22:11 memory_monitor_summary.json
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc   1603667 Jun  2 22:11 agis_ddmendpoints.agis.ALL.json
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc    367461 Jun  2 22:11 log.45006595._002589.job.log.tgz.1
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc        95 Jun  2 22:11 pilot_heartbeat.json
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc      7682 Jun  2 22:12 heartbeat.json
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc      4417 Jun  2 22:12 pilotlog.txt
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc   1059360 Jun  2 22:12 log.45006595._002589.job.log.1
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc       357 Jun  2 22:12 output.list
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc       620 Jun  2 22:12 runtime_log
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc   1443840 Jun  2 22:12 result.tar.gz
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc      8673 Jun  2 22:13 runtime_log.err
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc       657 Jun  2 22:13 pWCMDmohMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmciVKDmvEagmm.diag
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc      8192 Jun  2 22:48 boinc_mmap_file
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc        28 Jun  2 22:48 wrapper_checkpoint.txt
[2025-06-02 22:48:04] -rw-r--r--. 1 boinc boinc     20530 Jun  2 22:48 stderr.txt
[2025-06-02 22:48:04] HITS file was successfully produced:
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc 180161093 Jun  2 22:09 shared/HITS.pool.root.1
[2025-06-02 22:48:04]  *** Contents of shared directory: ***
[2025-06-02 22:48:04] total 389820
[2025-06-02 22:48:04] -rw-r--r--. 2 boinc boinc 217037315 Jun  2 18:42 ATLAS.root_0
[2025-06-02 22:48:04] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:42 start_atlas.sh
[2025-06-02 22:48:04] -rw-r--r--. 2 boinc boinc    508878 Jun  2 18:42 input.tar.gz
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc 180161093 Jun  2 22:09 HITS.pool.root.1
[2025-06-02 22:48:04] -rw-------. 1 boinc boinc   1443840 Jun  2 22:12 result.tar.gz
22:48:06 (17746): run_atlas exited; CPU time 43986.047860
22:48:06 (17746): called boinc_finish(0)

</stderr_txt>
]]>

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