Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:49:27 (938890): wrapper (7.7.26015): starting
23:49:27 (938890): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 23:49:27] Arguments: --nthreads 3
[2025-06-04 23:49:27] Threads: 3
[2025-06-04 23:49:27] Checking for CVMFS
[2025-06-04 23:49:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:49:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:49:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:49:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:49:27] 2.12.7.0 68668 6590 47980 146795 3 56 6281890 10240001 0 130560 0 2311481 99.982 1540342 1461 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-04 23:49:27] CVMFS is ok
[2025-06-04 23:49:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:49:27] Checking for apptainer binary...
[2025-06-04 23:49:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:49:27] Running /usr/bin/apptainer --version
[2025-06-04 23:49:27] apptainer version 1.3.4
[2025-06-04 23:49:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:49:28] ahanlst03
[2025-06-04 23:49:28] apptainer works
[2025-06-04 23:49:28] Set ATHENA_PROC_NUMBER=3
[2025-06-04 23:49:28] Set ATHENA_CORE_NUMBER=3
[2025-06-04 23:49:28] Starting ATLAS job with PandaID=6677381705
[2025-06-04 23:49:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:41:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:41:35] 2025-06-05 02:41:21,341 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6677381705/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,342 | INFO     | extracted standard info from prmon json
[2025-06-05 04:41:35] 2025-06-05 02:41:21,342 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:41:35] 2025-06-05 02:41:21,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:41:35] 2025-06-05 02:41:21,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:41:35] 2025-06-05 02:41:21,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:41:35] 2025-06-05 02:41:21,349 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:41:35] 2025-06-05 02:41:21,350 | INFO     | sum of square deviations: 7330250928.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,353 | INFO     | sum of deviations: -30832529910.000004
[2025-06-05 04:41:35] 2025-06-05 02:41:21,353 | INFO     | mean x: 1749082540.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,353 | INFO     | mean y: 2303419.7038327525
[2025-06-05 04:41:35] 2025-06-05 02:41:21,353 | INFO     | -- intersect: 7359301189.536356
[2025-06-05 04:41:35] 2025-06-05 02:41:21,353 | INFO     | intersect: 7359301189.536356
[2025-06-05 04:41:35] 2025-06-05 02:41:21,354 | INFO     | chi2: 2.58104448737591
[2025-06-05 04:41:35] 2025-06-05 02:41:21,354 | INFO     | sum of square deviations: 6953769450.5
[2025-06-05 04:41:35] 2025-06-05 02:41:21,357 | INFO     | sum of deviations: -10498274368.499998
[2025-06-05 04:41:35] 2025-06-05 02:41:21,357 | INFO     | mean x: 1749082387.5
[2025-06-05 04:41:35] 2025-06-05 02:41:21,357 | INFO     | mean y: 2311543.244680851
[2025-06-05 04:41:35] 2025-06-05 02:41:21,357 | INFO     | -- intersect: 2642943638.9443326
[2025-06-05 04:41:35] 2025-06-05 02:41:21,357 | INFO     | intersect: 2642943638.9443326
[2025-06-05 04:41:35] 2025-06-05 02:41:21,358 | INFO     | chi2: 1.5874711872268987
[2025-06-05 04:41:35] 2025-06-05 02:41:21,358 | INFO     | current chi2=1.5874711872268987 (change=38.4950087070818 %)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,358 | INFO     | sum of square deviations: 6590404498.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,361 | INFO     | sum of deviations: -10289769932.999998
[2025-06-05 04:41:35] 2025-06-05 02:41:21,361 | INFO     | mean x: 1749082235.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,362 | INFO     | mean y: 2311630.7328519854
[2025-06-05 04:41:35] 2025-06-05 02:41:21,362 | INFO     | -- intersect: 2733199210.927544
[2025-06-05 04:41:35] 2025-06-05 02:41:21,362 | INFO     | intersect: 2733199210.927544
[2025-06-05 04:41:35] 2025-06-05 02:41:21,362 | INFO     | chi2: 1.5870237222473964
[2025-06-05 04:41:35] 2025-06-05 02:41:21,362 | INFO     | current chi2=1.5870237222473964 (change=0.02818728195527019 %)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,363 | INFO     | right removable region: 276
[2025-06-05 04:41:35] 2025-06-05 02:41:21,363 | INFO     | sum of square deviations: 6953769450.5
[2025-06-05 04:41:35] 2025-06-05 02:41:21,366 | INFO     | sum of deviations: -59365322548.999985
[2025-06-05 04:41:35] 2025-06-05 02:41:21,366 | INFO     | mean x: 1749082692.5
[2025-06-05 04:41:35] 2025-06-05 02:41:21,366 | INFO     | mean y: 2314824.9929078016
[2025-06-05 04:41:35] 2025-06-05 02:41:21,366 | INFO     | -- intersect: 14934483477.445108
[2025-06-05 04:41:35] 2025-06-05 02:41:21,366 | INFO     | intersect: 14934483477.445108
[2025-06-05 04:41:35] 2025-06-05 02:41:21,367 | INFO     | chi2: 1.3316032389736978
[2025-06-05 04:41:35] 2025-06-05 02:41:21,367 | INFO     | current chi2=1.3316032389736978 (change=48.408357721586235 %)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,367 | INFO     | sum of square deviations: 6590404498.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,370 | INFO     | sum of deviations: -43812880523.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,370 | INFO     | mean x: 1749082845.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,370 | INFO     | mean y: 2308295.3429602887
[2025-06-05 04:41:35] 2025-06-05 02:41:21,370 | INFO     | -- intersect: 11630176924.054546
[2025-06-05 04:41:35] 2025-06-05 02:41:21,370 | INFO     | intersect: 11630176924.054546
[2025-06-05 04:41:35] 2025-06-05 02:41:21,371 | INFO     | chi2: 1.2461482657637482
[2025-06-05 04:41:35] 2025-06-05 02:41:21,371 | INFO     | current chi2=1.2461482657637482 (change=6.417450086394509 %)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,371 | INFO     | left removable region: 20
[2025-06-05 04:41:35] 2025-06-05 02:41:21,371 | INFO     | sum of square deviations: 5202255680.0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,374 | INFO     | sum of deviations: 3917561550.5
[2025-06-05 04:41:35] 2025-06-05 02:41:21,374 | INFO     | mean x: 1749082814.5
[2025-06-05 04:41:35] 2025-06-05 02:41:21,374 | INFO     | mean y: 2303905.94140625
[2025-06-05 04:41:35] 2025-06-05 02:41:21,374 | INFO     | -- intersect: -1314843886.1343427
[2025-06-05 04:41:35] 2025-06-05 02:41:21,374 | INFO     | intersect: -1314843886.1343427
[2025-06-05 04:41:35] 2025-06-05 02:41:21,375 | INFO     | chi2: 0.0023380140240842453
[2025-06-05 04:41:35] 2025-06-05 02:41:21,375 | INFO     | -- intersect: -1314843886.1343427
[2025-06-05 04:41:35] 2025-06-05 02:41:21,375 | INFO     | current memory leak: 0.75 B/s (using 256 data points, chi2=0.00)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,375 | INFO     | ..............................
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . Timing measurements:
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . get job = 0 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . initial setup = 2 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . payload setup = 14 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . stage-in = 0 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . payload execution = 17451 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . stage-out = 6 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,376 | INFO     | . log creation = 0 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,377 | INFO     | ..............................
[2025-06-05 04:41:35] 2025-06-05 02:41:21,685 | INFO     | 
[2025-06-05 04:41:35] 2025-06-05 02:41:21,685 | INFO     | job summary report
[2025-06-05 04:41:35] 2025-06-05 02:41:21,686 | INFO     | --------------------------------------------------
[2025-06-05 04:41:35] 2025-06-05 02:41:21,686 | INFO     | PanDA job id: 6677381705
[2025-06-05 04:41:35] 2025-06-05 02:41:21,686 | INFO     | task id: 45006595
[2025-06-05 04:41:35] 2025-06-05 02:41:21,687 | INFO     | errors: (none)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:41:35] 2025-06-05 02:41:21,687 | INFO     | pilot state: finished 
[2025-06-05 04:41:35] 2025-06-05 02:41:21,688 | INFO     | transexitcode: 0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,688 | INFO     | exeerrorcode: 0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,689 | INFO     | exeerrordiag: 
[2025-06-05 04:41:35] 2025-06-05 02:41:21,689 | INFO     | exitcode: 0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,689 | INFO     | exitmsg: OK
[2025-06-05 04:41:35] 2025-06-05 02:41:21,690 | INFO     | cpuconsumptiontime: 51525 s
[2025-06-05 04:41:35] 2025-06-05 02:41:21,690 | INFO     | nevents: 400
[2025-06-05 04:41:35] 2025-06-05 02:41:21,690 | INFO     | neventsw: 0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,691 | INFO     | pid: 948898
[2025-06-05 04:41:35] 2025-06-05 02:41:21,691 | INFO     | pgrp: 948898
[2025-06-05 04:41:35] 2025-06-05 02:41:21,691 | INFO     | corecount: 3
[2025-06-05 04:41:35] 2025-06-05 02:41:21,692 | INFO     | event service: False
[2025-06-05 04:41:35] 2025-06-05 02:41:21,692 | INFO     | sizes: {0: 2397169, 1: 2397368, 2: 2397368, 5: 2397602, 12: 2397658, 17470: 2429635, 17477: 2438646, 17485: 2438760}
[2025-06-05 04:41:35] 2025-06-05 02:41:21,692 | INFO     | --------------------------------------------------
[2025-06-05 04:41:35] 2025-06-05 02:41:21,693 | INFO     | 
[2025-06-05 04:41:35] 2025-06-05 02:41:21,693 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 04:41:35] 2025-06-05 02:41:21,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,731 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:41:35] 2025-06-05 02:41:21,732 | INFO     | job 6677381705 has completed (purged errors)
[2025-06-05 04:41:35] 2025-06-05 02:41:21,732 | INFO     | overall cleanup function is called
[2025-06-05 04:41:35] 2025-06-05 02:41:22,741 | INFO     | --- collectZombieJob: --- 10, [948898]
[2025-06-05 04:41:35] 2025-06-05 02:41:22,741 | INFO     | zombie collector waiting for pid 948898
[2025-06-05 04:41:35] 2025-06-05 02:41:22,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:41:35] 2025-06-05 02:41:22,742 | INFO     | collected zombie processes
[2025-06-05 04:41:35] 2025-06-05 02:41:22,743 | INFO     | will attempt to kill all subprocesses of pid=948898
[2025-06-05 04:41:35] 2025-06-05 02:41:22,818 | INFO     | process IDs to be killed: [948898] (in reverse order)
[2025-06-05 04:41:35] 2025-06-05 02:41:22,871 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:41:35] 2025-06-05 02:41:22,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:41:35] 2025-06-05 02:41:22,874 | INFO     | did not find any defunct processes belonging to 948898
[2025-06-05 04:41:35] 2025-06-05 02:41:22,877 | INFO     | did not find any defunct processes belonging to 948898
[2025-06-05 04:41:35] 2025-06-05 02:41:22,878 | INFO     | ready for new job
[2025-06-05 04:41:35] 2025-06-05 02:41:22,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:41:35] 2025-06-05 02:41:22,880 | INFO     | **************************************
[2025-06-05 04:41:35] 2025-06-05 02:41:22,881 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:41:35] 2025-06-05 02:41:22,881 | INFO     | **************************************
[2025-06-05 04:41:35] 2025-06-05 02:41:22,881 | INFO     | 
[2025-06-05 04:41:35] 2025-06-05 02:41:22,881 | INFO     | architecture information:
[2025-06-05 04:41:35] 2025-06-05 02:41:22,882 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:41:35] 2025-06-05 02:41:22,900 | INFO     | cat /etc/os-release:
[2025-06-05 04:41:35] NAME="CentOS Linux"
[2025-06-05 04:41:35] VERSION="7 (Core)"
[2025-06-05 04:41:35] ID="centos"
[2025-06-05 04:41:35] ID_LIKE="rhel fedora"
[2025-06-05 04:41:35] VERSION_ID="7"
[2025-06-05 04:41:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:41:35] ANSI_COLOR="0;31"
[2025-06-05 04:41:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:41:35] HOME_URL="https://www.centos.org/"
[2025-06-05 04:41:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:41:35] 
[2025-06-05 04:41:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:41:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:41:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:41:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:41:35] 
[2025-06-05 04:41:35] 2025-06-05 02:41:22,901 | INFO     | **************************************
[2025-06-05 04:41:35] 2025-06-05 02:41:23,404 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 04:41:35] 2025-06-05 02:41:23,430 | INFO     | sufficient remaining disk space (33593229312 B)
[2025-06-05 04:41:35] 2025-06-05 02:41:23,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:41:35] 2025-06-05 02:41:23,431 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:41:35] 2025-06-05 02:41:23,431 | INFO     | update_server=False
[2025-06-05 04:41:35] 2025-06-05 02:41:23,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:41:35] 2025-06-05 02:41:23,432 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:41:35] 2025-06-05 02:41:23,433 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:41:35] 2025-06-05 02:41:23,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:41:35] 2025-06-05 02:41:23,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:41:35] 2025-06-05 02:41:23,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:41:35] 2025-06-05 02:41:23,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:41:35] 2025-06-05 02:41:23,434 | INFO     | aborting loop
[2025-06-05 04:41:35] 2025-06-05 02:41:23,865 | INFO     | all payload control threads have been joined
[2025-06-05 04:41:35] 2025-06-05 02:41:23,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:41:35] 2025-06-05 02:41:24,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:41:35] 2025-06-05 02:41:24,085 | INFO     | all job control threads have been joined
[2025-06-05 04:41:35] 2025-06-05 02:41:24,437 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:24,439 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:24,439 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:24,536 | INFO     | all data control threads have been joined
[2025-06-05 04:41:35] 2025-06-05 02:41:24,698 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:24,835 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:24,848 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:24,871 | INFO     | [payload] control thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:24,963 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:25,091 | INFO     | [job] control thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:25,439 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:25,542 | INFO     | [data] control thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:25,626 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:25,808 | INFO     | [job] validate thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:25,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:25,907 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:28,006 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:41:35] 2025-06-05 02:41:29,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124414913652544)>', '<ExcThread(monitor, started 124414079244032)>']
[2025-06-05 04:41:35] 2025-06-05 02:41:30,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:41:35] 2025-06-05 02:41:30,466 | INFO     | [monitor] control thread has ended
[2025-06-05 04:41:35] 2025-06-05 02:41:34,747 | INFO     | all workflow threads have been joined
[2025-06-05 04:41:35] 2025-06-05 02:41:34,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:41:35] 2025-06-05 02:41:34,748 | INFO     | traces error code: 0
[2025-06-05 04:41:35] 2025-06-05 02:41:34,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:41:35] 2025-06-05 02:41:34,913 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:41:35] 2025-06-05 02:41:34,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:41:35] 2025-06-05 02:41:34,920 [wrapper] pilotpid: 942480
[2025-06-05 04:41:35] 2025-06-05 02:41:34,923 [wrapper] Pilot exit status: 0
[2025-06-05 04:41:35] 2025-06-05 02:41:34,935 [wrapper] pandaids: 6677381705
[2025-06-05 04:41:35] 2025-06-05 02:41:34,963 [wrapper] cleanup supervisor_pilot  977825 942481
[2025-06-05 04:41:35] 2025-06-05 02:41:34,967 [wrapper] Test setup, not cleaning
[2025-06-05 04:41:35] 2025-06-05 02:41:34,970 [wrapper] apfmon messages muted
[2025-06-05 04:41:35] 2025-06-05 02:41:34,974 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:41:35] 2025-06-05 02:41:34,977 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:41:35]  *** Error codes and diagnostics ***
[2025-06-05 04:41:35]     "exeErrorCode": 0,
[2025-06-05 04:41:35]     "exeErrorDiag": "",
[2025-06-05 04:41:35]     "pilotErrorCode": 0,
[2025-06-05 04:41:35]     "pilotErrorDiag": "",
[2025-06-05 04:41:35]  *** Listing of results directory ***
[2025-06-05 04:41:35] total 395372
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:55 queuedata.json
[2025-06-05 04:41:35] -rwx------ 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:41:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:49 run_atlas
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:49 job.xml
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc      9392 Jun  4 23:49 init_data.xml
[2025-06-05 04:41:35] -rw-r--r-- 2 boinc boinc 217037315 Jun  4 23:49 EVNT.45006593._000104.pool.root.1
[2025-06-05 04:41:35] drwxrwx--x 2 boinc boinc      4096 Jun  4 23:49 shared
[2025-06-05 04:41:35] -rw-r--r-- 2 boinc boinc    508878 Jun  4 23:49 input.tar.gz
[2025-06-05 04:41:35] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:49 start_atlas.sh
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:49 boinc_lockfile
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc      2520 Jun  4 23:49 pandaJob.out
[2025-06-05 04:41:35] -rw------- 1 boinc boinc    987032 Jun  4 23:49 agis_schedconf.cvmfs.json
[2025-06-05 04:41:35] drwx------ 4 boinc boinc      4096 Jun  4 23:49 pilot3
[2025-06-05 04:41:35] -rw------- 1 boinc boinc        95 Jun  5 04:40 pilot_heartbeat.json
[2025-06-05 04:41:35] -rw------- 1 boinc boinc 180158114 Jun  5 04:40 HITS.45006595._002579.pool.root.1
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc       530 Jun  5 04:40 boinc_task_state.xml
[2025-06-05 04:41:35] -rw------- 1 boinc boinc      1013 Jun  5 04:41 memory_monitor_summary.json
[2025-06-05 04:41:35] -rw------- 1 boinc boinc   1598969 Jun  5 04:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:41:35] -rw------- 1 boinc boinc    329865 Jun  5 04:41 log.45006595._002579.job.log.tgz.1
[2025-06-05 04:41:35] -rw------- 1 boinc boinc      7646 Jun  5 04:41 heartbeat.json
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc      8192 Jun  5 04:41 boinc_mmap_file
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc        28 Jun  5 04:41 wrapper_checkpoint.txt
[2025-06-05 04:41:35] -rw------- 1 boinc boinc      4483 Jun  5 04:41 pilotlog.txt
[2025-06-05 04:41:35] -rw------- 1 boinc boinc   1583462 Jun  5 04:41 log.45006595._002579.job.log.1
[2025-06-05 04:41:35] -rw------- 1 boinc boinc       357 Jun  5 04:41 output.list
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc       620 Jun  5 04:41 runtime_log
[2025-06-05 04:41:35] -rw------- 1 boinc boinc   1935360 Jun  5 04:41 result.tar.gz
[2025-06-05 04:41:35] -rw------- 1 boinc boinc       652 Jun  5 04:41 ZtvLDmohMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSiVKDmhvB7Em.diag
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc      8766 Jun  5 04:41 runtime_log.err
[2025-06-05 04:41:35] -rw-r--r-- 1 boinc boinc     20562 Jun  5 04:41 stderr.txt
[2025-06-05 04:41:35] HITS file was successfully produced:
[2025-06-05 04:41:35] -rw------- 1 boinc boinc 180158114 Jun  5 04:40 shared/HITS.pool.root.1
[2025-06-05 04:41:35]  *** Contents of shared directory: ***
[2025-06-05 04:41:35] total 390304
[2025-06-05 04:41:35] -rw-r--r-- 2 boinc boinc 217037315 Jun  4 23:49 ATLAS.root_0
[2025-06-05 04:41:35] -rw-r--r-- 2 boinc boinc    508878 Jun  4 23:49 input.tar.gz
[2025-06-05 04:41:35] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:49 start_atlas.sh
[2025-06-05 04:41:35] -rw------- 1 boinc boinc 180158114 Jun  5 04:40 HITS.pool.root.1
[2025-06-05 04:41:35] -rw------- 1 boinc boinc   1935360 Jun  5 04:41 result.tar.gz
04:41:36 (938890): run_atlas exited; CPU time 51624.958945
04:41:36 (938890): called boinc_finish(0)

</stderr_txt>
]]>

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