Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:38:32 (29668): wrapper (7.7.26015): starting
03:38:32 (29668): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:38:32] Arguments: --nthreads 8
[2025-06-03 03:38:32] Threads: 8
[2025-06-03 03:38:32] Checking for CVMFS
[2025-06-03 03:38:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:38:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:38:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:38:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:38:34] 2.11.2.0 25755 31300 101316 146723 0 114 14568387 25165824 4353 130560 0 16942278 99.806 16719339 2320 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 03:38:34] CVMFS is ok
[2025-06-03 03:38:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:38:34] Checking for apptainer binary...
[2025-06-03 03:38:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:38:34] Running /usr/bin/apptainer --version
[2025-06-03 03:38:34] apptainer version 1.3.2-1.el7
[2025-06-03 03:38:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:38:35] cg-vwn458.simple-grid.lan
[2025-06-03 03:38:35] apptainer works
[2025-06-03 03:38:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:38:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:38:35] Starting ATLAS job with PandaID=6677381754
[2025-06-03 03:38:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:06:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:06:07] 2025-06-03 05:05:49,851 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6677381754/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 07:06:07] 2025-06-03 05:05:49,852 | INFO     | extracted standard info from prmon json
[2025-06-03 07:06:07] 2025-06-03 05:05:49,852 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 07:06:07] 2025-06-03 05:05:49,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:06:07] 2025-06-03 05:05:49,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:06:07] 2025-06-03 05:05:49,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:06:07] 2025-06-03 05:05:49,856 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:06:07] 2025-06-03 05:05:49,857 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 07:06:07] 2025-06-03 05:05:49,858 | INFO     | sum of deviations: -11201429237.499998
[2025-06-03 07:06:07] 2025-06-03 05:05:49,858 | INFO     | mean x: 1748920925.5
[2025-06-03 07:06:07] 2025-06-03 05:05:49,859 | INFO     | mean y: 2483827.1534653464
[2025-06-03 07:06:07] 2025-06-03 05:05:49,859 | INFO     | -- intersect: 7667652658.021972
[2025-06-03 07:06:07] 2025-06-03 05:05:49,859 | INFO     | intersect: 7667652658.021972
[2025-06-03 07:06:07] 2025-06-03 05:05:49,859 | INFO     | chi2: 2.4327716446411842
[2025-06-03 07:06:07] 2025-06-03 05:05:49,860 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,861 | INFO     | sum of deviations: 2137105963.999998
[2025-06-03 07:06:07] 2025-06-03 05:05:49,861 | INFO     | mean x: 1748920773.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,861 | INFO     | mean y: 2494596.2030456853
[2025-06-03 07:06:07] 2025-06-03 05:05:49,861 | INFO     | -- intersect: -1574137199.6353226
[2025-06-03 07:06:07] 2025-06-03 05:05:49,862 | INFO     | intersect: -1574137199.6353226
[2025-06-03 07:06:07] 2025-06-03 05:05:49,862 | INFO     | chi2: 1.6658699730585016
[2025-06-03 07:06:07] 2025-06-03 05:05:49,862 | INFO     | current chi2=1.6658699730585016 (change=31.5237837168969 %)
[2025-06-03 07:06:07] 2025-06-03 05:05:49,862 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,864 | INFO     | sum of deviations: 2078924286.0000074
[2025-06-03 07:06:07] 2025-06-03 05:05:49,864 | INFO     | mean x: 1748920620.5
[2025-06-03 07:06:07] 2025-06-03 05:05:49,864 | INFO     | mean y: 2494545.7708333335
[2025-06-03 07:06:07] 2025-06-03 05:05:49,864 | INFO     | -- intersect: -1654184739.8864136
[2025-06-03 07:06:07] 2025-06-03 05:05:49,864 | INFO     | intersect: -1654184739.8864136
[2025-06-03 07:06:07] 2025-06-03 05:05:49,864 | INFO     | chi2: 1.6660865989778946
[2025-06-03 07:06:07] 2025-06-03 05:05:49,865 | INFO     | current chi2=1.6660865989778946 (change=-0.01300377117640556 %)
[2025-06-03 07:06:07] 2025-06-03 05:05:49,865 | INFO     | right removable region: 191
[2025-06-03 07:06:07] 2025-06-03 05:05:49,865 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,866 | INFO     | sum of deviations: -41500707487.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,866 | INFO     | mean x: 1748921078.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,867 | INFO     | mean y: 2508499.050761421
[2025-06-03 07:06:07] 2025-06-03 05:05:49,867 | INFO     | -- intersect: 30619308735.810425
[2025-06-03 07:06:07] 2025-06-03 05:05:49,867 | INFO     | intersect: 30619308735.810425
[2025-06-03 07:06:07] 2025-06-03 05:05:49,867 | INFO     | chi2: 0.9734839718321716
[2025-06-03 07:06:07] 2025-06-03 05:05:49,867 | INFO     | current chi2=0.9734839718321716 (change=59.984572576857985 %)
[2025-06-03 07:06:07] 2025-06-03 05:05:49,868 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,869 | INFO     | sum of deviations: -39173179775.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,869 | INFO     | mean x: 1748921230.5
[2025-06-03 07:06:07] 2025-06-03 05:05:49,869 | INFO     | mean y: 2506435.25
[2025-06-03 07:06:07] 2025-06-03 05:05:49,869 | INFO     | -- intersect: 31219332636.639015
[2025-06-03 07:06:07] 2025-06-03 05:05:49,869 | INFO     | intersect: 31219332636.639015
[2025-06-03 07:06:07] 2025-06-03 05:05:49,869 | INFO     | chi2: 0.9594923657788716
[2025-06-03 07:06:07] 2025-06-03 05:05:49,870 | INFO     | current chi2=0.9594923657788716 (change=1.4372713324664903 %)
[2025-06-03 07:06:07] 2025-06-03 05:05:49,870 | INFO     | left removable region: 20
[2025-06-03 07:06:07] 2025-06-03 05:05:49,870 | INFO     | sum of square deviations: 1550429070.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,871 | INFO     | sum of deviations: -12111066819.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,871 | INFO     | mean x: 1748921200.0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,871 | INFO     | mean y: 2505354.216374269
[2025-06-03 07:06:07] 2025-06-03 05:05:49,871 | INFO     | -- intersect: 13664079381.827751
[2025-06-03 07:06:07] 2025-06-03 05:05:49,871 | INFO     | intersect: 13664079381.827751
[2025-06-03 07:06:07] 2025-06-03 05:05:49,872 | INFO     | chi2: 0.11537407676938918
[2025-06-03 07:06:07] 2025-06-03 05:05:49,872 | INFO     | -- intersect: 13664079381.827751
[2025-06-03 07:06:07] 2025-06-03 05:05:49,872 | INFO     | current memory leak: -7.81 B/s (using 171 data points, chi2=0.12)
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | ..............................
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . Timing measurements:
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . get job = 0 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . initial setup = 2 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . payload setup = 14 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . stage-in = 0 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . payload execution = 12286 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . stage-out = 3 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | . log creation = 1 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,873 | INFO     | ..............................
[2025-06-03 07:06:07] 2025-06-03 05:05:49,990 | INFO     | 
[2025-06-03 07:06:07] 2025-06-03 05:05:49,990 | INFO     | job summary report
[2025-06-03 07:06:07] 2025-06-03 05:05:49,990 | INFO     | --------------------------------------------------
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | PanDA job id: 6677381754
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | task id: 45006595
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | errors: (none)
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | pilot state: finished 
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | transexitcode: 0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | exeerrorcode: 0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | exeerrordiag: 
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | exitcode: 0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | exitmsg: OK
[2025-06-03 07:06:07] 2025-06-03 05:05:49,991 | INFO     | cpuconsumptiontime: 45592 s
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | nevents: 400
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | neventsw: 0
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | pid: 9511
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | pgrp: 9511
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | corecount: 8
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | event service: False
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | sizes: {0: 2404343, 1: 2405200, 2: 2405200, 10: 2405434, 12: 2405462, 12305: 2434735, 12310: 2443678, 12311: 2443734, 12390: 2443904}
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | --------------------------------------------------
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | 
[2025-06-03 07:06:07] 2025-06-03 05:05:49,992 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-03 07:06:07] 2025-06-03 05:05:50,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:06:07] 2025-06-03 05:05:50,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:06:07] 2025-06-03 05:05:50,401 | INFO     | job 6677381754 has completed (purged errors)
[2025-06-03 07:06:07] 2025-06-03 05:05:50,401 | INFO     | overall cleanup function is called
[2025-06-03 07:06:07] 2025-06-03 05:05:51,410 | INFO     | --- collectZombieJob: --- 10, [9511]
[2025-06-03 07:06:07] 2025-06-03 05:05:51,411 | INFO     | zombie collector waiting for pid 9511
[2025-06-03 07:06:07] 2025-06-03 05:05:51,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:06:07] 2025-06-03 05:05:51,411 | INFO     | collected zombie processes
[2025-06-03 07:06:07] 2025-06-03 05:05:51,411 | INFO     | will attempt to kill all subprocesses of pid=9511
[2025-06-03 07:06:07] 2025-06-03 05:05:51,557 | INFO     | process IDs to be killed: [9511] (in reverse order)
[2025-06-03 07:06:07] 2025-06-03 05:05:52,340 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:06:07] 2025-06-03 05:05:52,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:06:07] 2025-06-03 05:05:52,343 | INFO     | did not find any defunct processes belonging to 9511
[2025-06-03 07:06:07] 2025-06-03 05:05:52,346 | INFO     | did not find any defunct processes belonging to 9511
[2025-06-03 07:06:07] 2025-06-03 05:05:52,346 | INFO     | ready for new job
[2025-06-03 07:06:07] 2025-06-03 05:05:52,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:06:07] 2025-06-03 05:05:52,348 | INFO     | **************************************
[2025-06-03 07:06:07] 2025-06-03 05:05:52,348 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:06:07] 2025-06-03 05:05:52,348 | INFO     | **************************************
[2025-06-03 07:06:07] 2025-06-03 05:05:52,348 | INFO     | 
[2025-06-03 07:06:07] 2025-06-03 05:05:52,349 | INFO     | pilot is running in a VM
[2025-06-03 07:06:07] 2025-06-03 05:05:52,349 | INFO     | architecture information:
[2025-06-03 07:06:07] 2025-06-03 05:05:52,366 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:06:07] 2025-06-03 05:05:52,653 | INFO     | cat /etc/os-release:
[2025-06-03 07:06:07] NAME="CentOS Linux"
[2025-06-03 07:06:07] VERSION="7 (Core)"
[2025-06-03 07:06:07] ID="centos"
[2025-06-03 07:06:07] ID_LIKE="rhel fedora"
[2025-06-03 07:06:07] VERSION_ID="7"
[2025-06-03 07:06:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:06:07] ANSI_COLOR="0;31"
[2025-06-03 07:06:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:06:07] HOME_URL="https://www.centos.org/"
[2025-06-03 07:06:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:06:07] 
[2025-06-03 07:06:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:06:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:06:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:06:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:06:07] 
[2025-06-03 07:06:07] 2025-06-03 05:05:52,653 | INFO     | **************************************
[2025-06-03 07:06:07] 2025-06-03 05:05:53,156 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-03 07:06:07] 2025-06-03 05:05:53,426 | INFO     | sufficient remaining disk space (496867737600 B)
[2025-06-03 07:06:07] 2025-06-03 05:05:53,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:06:07] 2025-06-03 05:05:53,426 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:06:07] 2025-06-03 05:05:53,426 | INFO     | update_server=False
[2025-06-03 07:06:07] 2025-06-03 05:05:53,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:06:07] 2025-06-03 05:05:53,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:06:07] 2025-06-03 05:05:53,428 | INFO     | aborting loop
[2025-06-03 07:06:07] 2025-06-03 05:05:53,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:06:07] 2025-06-03 05:05:53,704 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:06:07] 2025-06-03 05:05:53,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:06:07] 2025-06-03 05:05:53,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:06:07] 2025-06-03 05:05:53,734 | INFO     | all data control threads have been joined
[2025-06-03 07:06:07] 2025-06-03 05:05:54,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:06:07] 2025-06-03 05:05:54,399 | INFO     | all payload control threads have been joined
[2025-06-03 07:06:07] 2025-06-03 05:05:54,432 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:54,433 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:54,506 | INFO     | all job control threads have been joined
[2025-06-03 07:06:07] 2025-06-03 05:05:54,561 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:54,740 | INFO     | [data] control thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:06:07] 2025-06-03 05:05:55,065 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,083 | INFO     | [job] validate thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,405 | INFO     | [payload] control thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,440 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,512 | INFO     | [job] control thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,651 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,724 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:55,949 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:56,013 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:56,025 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:58,052 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:06:07] 2025-06-03 05:05:58,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365056927552)>', '<ExcThread(monitor, started 140364446930688)>']
[2025-06-03 07:06:07] 2025-06-03 05:05:58,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:06:07] 2025-06-03 05:05:58,735 | INFO     | [monitor] control thread has ended
[2025-06-03 07:06:07] 2025-06-03 05:06:03,191 | INFO     | all workflow threads have been joined
[2025-06-03 07:06:07] 2025-06-03 05:06:03,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:06:07] 2025-06-03 05:06:03,192 | INFO     | traces error code: 0
[2025-06-03 07:06:07] 2025-06-03 05:06:03,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:06:07] 2025-06-03 05:06:03,535 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:06:07] 2025-06-03 05:06:03,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:06:07] 2025-06-03 05:06:03,721 [wrapper] pilotpid: 923
[2025-06-03 07:06:07] 2025-06-03 05:06:03,844 [wrapper] Pilot exit status: 0
[2025-06-03 07:06:07] 2025-06-03 05:06:04,353 [wrapper] pandaids: 6677381754
[2025-06-03 07:06:07] 2025-06-03 05:06:04,847 [wrapper] cleanup supervisor_pilot 11168 924
[2025-06-03 07:06:07] 2025-06-03 05:06:04,962 [wrapper] Test setup, not cleaning
[2025-06-03 07:06:07] 2025-06-03 05:06:05,072 [wrapper] apfmon messages muted
[2025-06-03 07:06:07] 2025-06-03 05:06:05,150 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:06:07] 2025-06-03 05:06:05,262 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:06:07]  *** Error codes and diagnostics ***
[2025-06-03 07:06:07]     "exeErrorCode": 0,
[2025-06-03 07:06:07]     "exeErrorDiag": "",
[2025-06-03 07:06:07]     "pilotErrorCode": 0,
[2025-06-03 07:06:07]     "pilotErrorDiag": "",
[2025-06-03 07:06:07]  *** Listing of results directory ***
[2025-06-03 07:06:07] total 394152
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 07:06:07] -rwx------. 1 boinc boinc     37140 Jun  2 17:54 runpilot2-wrapper.sh
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:55 queuedata.json
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:06:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:38 run_atlas
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:38 job.xml
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc      6392 Jun  3 03:38 init_data.xml
[2025-06-03 07:06:07] -rw-r--r--. 2 boinc boinc 216022339 Jun  3 03:38 EVNT.45006593._000106.pool.root.1
[2025-06-03 07:06:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:38 start_atlas.sh
[2025-06-03 07:06:07] drwxrwx--x. 2 boinc boinc        68 Jun  3 03:38 shared
[2025-06-03 07:06:07] -rw-r--r--. 2 boinc boinc    508877 Jun  3 03:38 input.tar.gz
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:38 boinc_lockfile
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc      2518 Jun  3 03:38 pandaJob.out
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc    988081 Jun  3 03:38 agis_schedconf.cvmfs.json
[2025-06-03 07:06:07] drwx------. 4 boinc boinc      4096 Jun  3 03:38 pilot3
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc 180887619 Jun  3 07:03 HITS.45006595._002628.pool.root.1
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:03 boinc_task_state.xml
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc      1020 Jun  3 07:04 memory_monitor_summary.json
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc   1603667 Jun  3 07:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc    357612 Jun  3 07:04 log.45006595._002628.job.log.tgz.1
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc        95 Jun  3 07:04 pilot_heartbeat.json
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc      7686 Jun  3 07:05 heartbeat.json
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc      4417 Jun  3 07:06 pilotlog.txt
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc      8192 Jun  3 07:06 boinc_mmap_file
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc        28 Jun  3 07:06 wrapper_checkpoint.txt
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc   1081957 Jun  3 07:06 log.45006595._002628.job.log.1
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc       357 Jun  3 07:06 output.list
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:06 runtime_log
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc   1454080 Jun  3 07:06 result.tar.gz
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc      8673 Jun  3 07:06 runtime_log.err
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc       656 Jun  3 07:06 LQKKDmsfMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6hVKDmDzF8Pm.diag
[2025-06-03 07:06:07] -rw-r--r--. 1 boinc boinc     20493 Jun  3 07:06 stderr.txt
[2025-06-03 07:06:07] HITS file was successfully produced:
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc 180887619 Jun  3 07:03 shared/HITS.pool.root.1
[2025-06-03 07:06:07]  *** Contents of shared directory: ***
[2025-06-03 07:06:07] total 389548
[2025-06-03 07:06:07] -rw-r--r--. 2 boinc boinc 216022339 Jun  3 03:38 ATLAS.root_0
[2025-06-03 07:06:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:38 start_atlas.sh
[2025-06-03 07:06:07] -rw-r--r--. 2 boinc boinc    508877 Jun  3 03:38 input.tar.gz
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc 180887619 Jun  3 07:03 HITS.pool.root.1
[2025-06-03 07:06:07] -rw-------. 1 boinc boinc   1454080 Jun  3 07:06 result.tar.gz
07:06:08 (29668): run_atlas exited; CPU time 45738.391863
07:06:08 (29668): called boinc_finish(0)

</stderr_txt>
]]>

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