Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:00:42 (1367825): wrapper (7.7.26015): starting
12:00:42 (1367825): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 12:00:42] Arguments: --nthreads 4
[2025-06-03 12:00:42] Threads: 4
[2025-06-03 12:00:42] Checking for CVMFS
[2025-06-03 12:00:42] No cvmfs_config command found, will try listing directly
[2025-06-03 12:00:42] CVMFS is ok
[2025-06-03 12:00:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:00:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:00:42] Further information can be found at the LHC@home message board.
[2025-06-03 12:00:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:00:42] Checking for apptainer binary...
[2025-06-03 12:00:42] which: no apptainer in ((null))
[2025-06-03 12:00:42] apptainer is not installed, using version from CVMFS
[2025-06-03 12:00:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:00:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-03 12:00:42] apptainer works
[2025-06-03 12:00:42] Set ATHENA_PROC_NUMBER=4
[2025-06-03 12:00:42] Set ATHENA_CORE_NUMBER=4
[2025-06-03 12:00:42] Starting ATLAS job with PandaID=6677379655
[2025-06-03 12:00:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:35:43]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:35:43] 2025-06-03 12:33:45,806 | INFO     | executing command: lscpu
[2025-06-03 14:35:43] 2025-06-03 12:33:45,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 14:35:43] 2025-06-03 12:33:45,878 | INFO     | monitor loop #669: job 0:6677379655 is in state 'finished'
[2025-06-03 14:35:43] 2025-06-03 12:33:45,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:35:43] 2025-06-03 12:33:48,381 | INFO     | monitor loop #670: job 0:6677379655 is in state 'finished'
[2025-06-03 14:35:43] 2025-06-03 12:33:48,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,262 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 14:35:43] 2025-06-03 12:33:50,262 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677379655/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,263 | INFO     | extracted standard info from prmon json
[2025-06-03 14:35:43] 2025-06-03 12:33:50,263 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:35:43] 2025-06-03 12:33:50,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:35:43] 2025-06-03 12:33:50,264 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:35:43] 2025-06-03 12:33:50,264 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:35:43] 2025-06-03 12:33:50,268 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:35:43] 2025-06-03 12:33:50,268 | INFO     | sum of square deviations: 1046484737.5
[2025-06-03 14:35:43] 2025-06-03 12:33:50,269 | INFO     | sum of deviations: -14619647258.5
[2025-06-03 14:35:43] 2025-06-03 12:33:50,269 | INFO     | mean x: 1748949425.5
[2025-06-03 14:35:43] 2025-06-03 12:33:50,269 | INFO     | mean y: 2393933.86
[2025-06-03 14:35:43] 2025-06-03 12:33:50,269 | INFO     | -- intersect: 24435644374.615925
[2025-06-03 14:35:43] 2025-06-03 12:33:50,269 | INFO     | intersect: 24435644374.615925
[2025-06-03 14:35:43] 2025-06-03 12:33:50,270 | INFO     | chi2: 1.5548261622719706
[2025-06-03 14:35:43] 2025-06-03 12:33:50,270 | INFO     | sum of square deviations: 945282840.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,271 | INFO     | sum of deviations: -13085195949.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,271 | INFO     | mean x: 1748949273.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,271 | INFO     | mean y: 2396246.9931034483
[2025-06-03 14:35:43] 2025-06-03 12:33:50,271 | INFO     | -- intersect: 24212445317.667118
[2025-06-03 14:35:43] 2025-06-03 12:33:50,271 | INFO     | intersect: 24212445317.667118
[2025-06-03 14:35:43] 2025-06-03 12:33:50,272 | INFO     | chi2: 1.555259340182638
[2025-06-03 14:35:43] 2025-06-03 12:33:50,272 | INFO     | current chi2=1.555259340182638 (change=-0.02786021493454042 %)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,272 | INFO     | right removable region: 144
[2025-06-03 14:35:43] 2025-06-03 12:33:50,272 | INFO     | sum of square deviations: 945282840.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,273 | INFO     | sum of deviations: -34972068051.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,273 | INFO     | mean x: 1748949578.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,273 | INFO     | mean y: 2424047.1310344827
[2025-06-03 14:35:43] 2025-06-03 12:33:50,274 | INFO     | -- intersect: 64707273295.8318
[2025-06-03 14:35:43] 2025-06-03 12:33:50,274 | INFO     | intersect: 64707273295.8318
[2025-06-03 14:35:43] 2025-06-03 12:33:50,274 | INFO     | chi2: 0.04824979128315275
[2025-06-03 14:35:43] 2025-06-03 12:33:50,274 | INFO     | current chi2=0.04824979128315275 (change=96.89677261330306 %)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,275 | INFO     | sum of square deviations: 850825255.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,276 | INFO     | sum of deviations: -29887173809.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,276 | INFO     | mean x: 1748949730.5
[2025-06-03 14:35:43] 2025-06-03 12:33:50,276 | INFO     | mean y: 2415804.3714285716
[2025-06-03 14:35:43] 2025-06-03 12:33:50,276 | INFO     | -- intersect: 61438256209.2936
[2025-06-03 14:35:43] 2025-06-03 12:33:50,276 | INFO     | intersect: 61438256209.2936
[2025-06-03 14:35:43] 2025-06-03 12:33:50,276 | INFO     | chi2: 0.04102085416732263
[2025-06-03 14:35:43] 2025-06-03 12:33:50,276 | INFO     | current chi2=0.04102085416732263 (change=14.98231789938173 %)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,277 | INFO     | left removable region: 20
[2025-06-03 14:35:43] 2025-06-03 12:33:50,277 | INFO     | sum of square deviations: 591173875.0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,277 | INFO     | sum of deviations: -22127815361.5
[2025-06-03 14:35:43] 2025-06-03 12:33:50,277 | INFO     | mean x: 1748949852.5
[2025-06-03 14:35:43] 2025-06-03 12:33:50,278 | INFO     | mean y: 2409141.0725806453
[2025-06-03 14:35:43] 2025-06-03 12:33:50,278 | INFO     | -- intersect: 65466126414.848694
[2025-06-03 14:35:43] 2025-06-03 12:33:50,278 | INFO     | intersect: 65466126414.848694
[2025-06-03 14:35:43] 2025-06-03 12:33:50,278 | INFO     | chi2: 0.031298166240084004
[2025-06-03 14:35:43] 2025-06-03 12:33:50,278 | INFO     | -- intersect: 65466126414.848694
[2025-06-03 14:35:43] 2025-06-03 12:33:50,278 | INFO     | current memory leak: -37.43 B/s (using 124 data points, chi2=0.03)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | ..............................
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | . Timing measurements:
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | . get job = 0 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | . initial setup = 1 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | . payload setup = 7 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | . stage-in = 0 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | . payload execution = 9143 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,279 | INFO     | . stage-out = 0 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,280 | INFO     | . log creation = 0 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,280 | INFO     | ..............................
[2025-06-03 14:35:43] 2025-06-03 12:33:50,388 | INFO     | 
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | job summary report
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | --------------------------------------------------
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | PanDA job id: 6677379655
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | task id: 45006595
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | errors: (none)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | pilot state: finished 
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | transexitcode: 0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | exeerrorcode: 0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | exeerrordiag: 
[2025-06-03 14:35:43] 2025-06-03 12:33:50,389 | INFO     | exitcode: 0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | exitmsg: OK
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | cpuconsumptiontime: 34911 s
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | nevents: 400
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | neventsw: 0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | pid: 1378479
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | pgrp: 1378479
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | corecount: 4
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | event service: False
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | sizes: {0: 2405187, 1: 2405187, 5: 2405421, 11: 2405477, 9154: 2433510, 9156: 2442473, 9157: 2442657, 9161: 2442827}
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | --------------------------------------------------
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | 
[2025-06-03 14:35:43] 2025-06-03 12:33:50,390 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-03 14:35:43] 2025-06-03 12:33:50,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | job 6677379655 has completed (purged errors)
[2025-06-03 14:35:43] 2025-06-03 12:33:50,414 | INFO     | overall cleanup function is called
[2025-06-03 14:35:43] 2025-06-03 12:33:51,421 | INFO     | --- collectZombieJob: --- 10, [1378479]
[2025-06-03 14:35:43] 2025-06-03 12:33:51,422 | INFO     | zombie collector waiting for pid 1378479
[2025-06-03 14:35:43] 2025-06-03 12:33:51,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:35:43] 2025-06-03 12:33:51,422 | INFO     | collected zombie processes
[2025-06-03 14:35:43] 2025-06-03 12:33:51,422 | INFO     | will attempt to kill all subprocesses of pid=1378479
[2025-06-03 14:35:43] 2025-06-03 12:33:51,774 | INFO     | process IDs to be killed: [1378479] (in reverse order)
[2025-06-03 14:35:43] 2025-06-03 12:33:51,893 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:35:43] 2025-06-03 12:33:51,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:35:43] 2025-06-03 12:33:51,905 | INFO     | did not find any defunct processes belonging to 1378479
[2025-06-03 14:35:43] 2025-06-03 12:33:51,916 | INFO     | did not find any defunct processes belonging to 1378479
[2025-06-03 14:35:43] 2025-06-03 12:33:51,916 | INFO     | ready for new job
[2025-06-03 14:35:43] 2025-06-03 12:33:51,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:35:43] 2025-06-03 12:33:51,919 | INFO     | **************************************
[2025-06-03 14:35:43] 2025-06-03 12:33:51,919 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:35:43] 2025-06-03 12:33:51,919 | INFO     | **************************************
[2025-06-03 14:35:43] 2025-06-03 12:33:51,919 | INFO     | 
[2025-06-03 14:35:43] 2025-06-03 12:33:51,923 | INFO     | architecture information:
[2025-06-03 14:35:43] 2025-06-03 12:33:51,924 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:35:43] 2025-06-03 12:33:51,941 | INFO     | cat /etc/os-release:
[2025-06-03 14:35:43] NAME="CentOS Linux"
[2025-06-03 14:35:43] VERSION="7 (Core)"
[2025-06-03 14:35:43] ID="centos"
[2025-06-03 14:35:43] ID_LIKE="rhel fedora"
[2025-06-03 14:35:43] VERSION_ID="7"
[2025-06-03 14:35:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:35:43] ANSI_COLOR="0;31"
[2025-06-03 14:35:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:35:43] HOME_URL="https://www.centos.org/"
[2025-06-03 14:35:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:35:43] 
[2025-06-03 14:35:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:35:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:35:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:35:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:35:43] 
[2025-06-03 14:35:43] 2025-06-03 12:33:51,941 | INFO     | **************************************
[2025-06-03 14:35:43] 2025-06-03 12:33:52,444 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-03 14:35:43] 2025-06-03 12:33:52,461 | INFO     | sufficient remaining disk space (643053912064 B)
[2025-06-03 14:35:43] 2025-06-03 12:33:52,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:35:43] 2025-06-03 12:33:52,462 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:35:43] 2025-06-03 12:33:52,462 | INFO     | update_server=False
[2025-06-03 14:35:43] 2025-06-03 12:33:52,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:35:43] 2025-06-03 12:33:52,463 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 14:35:43] 2025-06-03 12:33:52,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:35:43] 2025-06-03 12:33:52,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:35:43] 2025-06-03 12:33:52,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:35:43] 2025-06-03 12:33:52,464 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:35:43] 2025-06-03 12:33:52,465 | INFO     | aborting loop
[2025-06-03 14:35:43] 2025-06-03 12:33:52,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:35:43] 2025-06-03 12:33:52,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:35:43] 2025-06-03 12:33:52,633 | INFO     | all job control threads have been joined
[2025-06-03 14:35:43] 2025-06-03 12:33:52,879 | INFO     | all payload control threads have been joined
[2025-06-03 14:35:43] 2025-06-03 12:33:53,347 | INFO     | all data control threads have been joined
[2025-06-03 14:35:43] 2025-06-03 12:33:53,463 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,470 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,471 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,552 | INFO     | [job] validate thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,635 | INFO     | [job] control thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,878 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,885 | INFO     | [payload] control thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,917 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:53,991 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:54,269 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:54,353 | INFO     | [data] control thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:54,395 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:54,470 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:55,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:35:43] 2025-06-03 12:33:56,399 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:33:56,470 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:34:02,717 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:35:43] 2025-06-03 12:34:03,722 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:35:43] 2025-06-03 12:34:05,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22689485383488)>', '<ExcThread(monitor, started 22689251038976)>']
[2025-06-03 14:35:43] 2025-06-03 12:34:06,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:35:43] 2025-06-03 12:34:06,514 | INFO     | [monitor] control thread has ended
[2025-06-03 14:35:43] 2025-06-03 12:34:10,661 | INFO     | all workflow threads have been joined
[2025-06-03 14:35:43] 2025-06-03 12:34:10,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:35:43] 2025-06-03 12:34:10,661 | INFO     | traces error code: 0
[2025-06-03 14:35:43] 2025-06-03 12:34:10,661 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:35:43] 2025-06-03 12:34:10,831 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:35:43] 2025-06-03 12:34:10,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:35:43] 2025-06-03 12:34:10,838 [wrapper] pilotpid: 1371509
[2025-06-03 14:35:43] 2025-06-03 12:34:10,841 [wrapper] Pilot exit status: 0
[2025-06-03 14:35:43] 2025-06-03 12:34:10,852 [wrapper] pandaids: 6677379655
[2025-06-03 14:35:43] 2025-06-03 12:34:10,924 [wrapper] cleanup supervisor_pilot 1636703 1371510
[2025-06-03 14:35:43] 2025-06-03 12:34:10,927 [wrapper] Test setup, not cleaning
[2025-06-03 14:35:43] 2025-06-03 12:34:10,930 [wrapper] apfmon messages muted
[2025-06-03 14:35:43] 2025-06-03 12:34:10,933 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:35:43] 2025-06-03 12:34:10,936 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:35:43]  *** Error codes and diagnostics ***
[2025-06-03 14:35:43]     "exeErrorCode": 0,
[2025-06-03 14:35:43]     "exeErrorDiag": "",
[2025-06-03 14:35:43]     "pilotErrorCode": 0,
[2025-06-03 14:35:43]     "pilotErrorDiag": "",
[2025-06-03 14:35:43]  *** Listing of results directory ***
[2025-06-03 14:35:43] total 384988
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 14:35:43] -rwx------ 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:52 queuedata.json
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc       100 Jun  3 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:35:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 12:00 run_atlas
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc       105 Jun  3 12:00 job.xml
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc      6635 Jun  3 12:00 init_data.xml
[2025-06-03 14:35:43] -rw-r--r-- 2 boinc boinc 214348756 Jun  3 12:00 EVNT.45006593._000069.pool.root.1
[2025-06-03 14:35:43] -rw-r--r-- 2 boinc boinc     15093 Jun  3 12:00 start_atlas.sh
[2025-06-03 14:35:43] drwxrwx--x 2 boinc boinc      4096 Jun  3 12:00 shared
[2025-06-03 14:35:43] -rw-r--r-- 2 boinc boinc    508872 Jun  3 12:00 input.tar.gz
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc         0 Jun  3 12:00 boinc_lockfile
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc      2521 Jun  3 12:00 pandaJob.out
[2025-06-03 14:35:43] -rw------- 1 boinc boinc    985490 Jun  3 12:00 agis_schedconf.cvmfs.json
[2025-06-03 14:35:43] -rw------- 1 boinc boinc   1603667 Jun  3 12:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:35:43] drwx------ 4 boinc boinc      4096 Jun  3 12:00 pilot3
[2025-06-03 14:35:43] -rw------- 1 boinc boinc 173730360 Jun  3 14:33 HITS.45006595._001713.pool.root.1
[2025-06-03 14:35:43] -rw------- 1 boinc boinc        95 Jun  3 14:33 pilot_heartbeat.json
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc       528 Jun  3 14:33 boinc_task_state.xml
[2025-06-03 14:35:43] -rw------- 1 boinc boinc      1034 Jun  3 14:33 memory_monitor_summary.json
[2025-06-03 14:35:43] -rw------- 1 boinc boinc    284123 Jun  3 14:33 log.45006595._001713.job.log.tgz.1
[2025-06-03 14:35:43] -rw------- 1 boinc boinc      7734 Jun  3 14:33 heartbeat.json
[2025-06-03 14:35:43] -rw------- 1 boinc boinc      4558 Jun  3 14:34 pilotlog.txt
[2025-06-03 14:35:43] -rw------- 1 boinc boinc    871772 Jun  3 14:34 log.45006595._001713.job.log.1
[2025-06-03 14:35:43] -rw------- 1 boinc boinc       357 Jun  3 14:34 output.list
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc       620 Jun  3 14:34 runtime_log
[2025-06-03 14:35:43] -rw------- 1 boinc boinc   1177600 Jun  3 14:34 result.tar.gz
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc      9025 Jun  3 14:34 runtime_log.err
[2025-06-03 14:35:43] -rw------- 1 boinc boinc       662 Jun  3 14:34 XneKDm3bMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm8eKDmWV4YXm.diag
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc        26 Jun  3 14:35 wrapper_checkpoint.txt
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc      8192 Jun  3 14:35 boinc_mmap_file
[2025-06-03 14:35:43] -rw-r--r-- 1 boinc boinc     20897 Jun  3 14:35 stderr.txt
[2025-06-03 14:35:43] HITS file was successfully produced:
[2025-06-03 14:35:43] -rw------- 1 boinc boinc 173730360 Jun  3 14:33 shared/HITS.pool.root.1
[2025-06-03 14:35:43]  *** Contents of shared directory: ***
[2025-06-03 14:35:43] total 380660
[2025-06-03 14:35:43] -rw-r--r-- 2 boinc boinc 214348756 Jun  3 12:00 ATLAS.root_0
[2025-06-03 14:35:43] -rw-r--r-- 2 boinc boinc     15093 Jun  3 12:00 start_atlas.sh
[2025-06-03 14:35:43] -rw-r--r-- 2 boinc boinc    508872 Jun  3 12:00 input.tar.gz
[2025-06-03 14:35:43] -rw------- 1 boinc boinc 173730360 Jun  3 14:33 HITS.pool.root.1
[2025-06-03 14:35:43] -rw------- 1 boinc boinc   1177600 Jun  3 14:34 result.tar.gz
14:35:45 (1367825): run_atlas exited; CPU time 35261.143803
14:35:45 (1367825): called boinc_finish(0)

</stderr_txt>
]]>

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