Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:14:25 (1954801): wrapper (7.7.26015): starting
17:14:25 (1954801): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 17:14:25] Arguments: --nthreads 4
[2025-06-03 17:14:25] Threads: 4
[2025-06-03 17:14:25] Checking for CVMFS
[2025-06-03 17:14:25] No cvmfs_config command found, will try listing directly
[2025-06-03 17:14:25] CVMFS is ok
[2025-06-03 17:14:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 17:14:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 17:14:25] Further information can be found at the LHC@home message board.
[2025-06-03 17:14:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 17:14:25] Checking for apptainer binary...
[2025-06-03 17:14:25] which: no apptainer in ((null))
[2025-06-03 17:14:25] apptainer is not installed, using version from CVMFS
[2025-06-03 17:14:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 17:14:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-03 17:14:25] apptainer works
[2025-06-03 17:14:25] Set ATHENA_PROC_NUMBER=4
[2025-06-03 17:14:25] Set ATHENA_CORE_NUMBER=4
[2025-06-03 17:14:25] Starting ATLAS job with PandaID=6677379649
[2025-06-03 17:14:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:51:46]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:51:46] 2025-06-03 17:51:06,028 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677379649/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,029 | INFO     | extracted standard info from prmon json
[2025-06-03 19:51:46] 2025-06-03 17:51:06,029 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:51:46] 2025-06-03 17:51:06,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:51:46] 2025-06-03 17:51:06,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:51:46] 2025-06-03 17:51:06,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:51:46] 2025-06-03 17:51:06,034 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:51:46] 2025-06-03 17:51:06,034 | INFO     | sum of square deviations: 1132458442.5
[2025-06-03 19:51:46] 2025-06-03 17:51:06,035 | INFO     | sum of deviations: 12369035026.00001
[2025-06-03 19:51:46] 2025-06-03 17:51:06,035 | INFO     | mean x: 1748968372.5
[2025-06-03 19:51:46] 2025-06-03 17:51:06,035 | INFO     | mean y: 2294423.1298701297
[2025-06-03 19:51:46] 2025-06-03 17:51:06,036 | INFO     | -- intersect: -19100438398.625515
[2025-06-03 19:51:46] 2025-06-03 17:51:06,036 | INFO     | intersect: -19100438398.625515
[2025-06-03 19:51:46] 2025-06-03 17:51:06,037 | INFO     | chi2: 2.520952829632005
[2025-06-03 19:51:46] 2025-06-03 17:51:06,037 | INFO     | sum of square deviations: 1025693650.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,038 | INFO     | sum of deviations: 20911793019.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,038 | INFO     | mean x: 1748968220.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,038 | INFO     | mean y: 2306289.2281879196
[2025-06-03 19:51:46] 2025-06-03 17:51:06,038 | INFO     | -- intersect: -35655574027.61774
[2025-06-03 19:51:46] 2025-06-03 17:51:06,038 | INFO     | intersect: -35655574027.61774
[2025-06-03 19:51:46] 2025-06-03 17:51:06,039 | INFO     | chi2: 1.836947924760547
[2025-06-03 19:51:46] 2025-06-03 17:51:06,039 | INFO     | current chi2=1.836947924760547 (change=27.132792681856944 %)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,039 | INFO     | sum of square deviations: 925859220.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,040 | INFO     | sum of deviations: 20409509167.5
[2025-06-03 19:51:46] 2025-06-03 17:51:06,040 | INFO     | mean x: 1748968067.5
[2025-06-03 19:51:46] 2025-06-03 17:51:06,040 | INFO     | mean y: 2305521.8680555555
[2025-06-03 19:51:46] 2025-06-03 17:51:06,040 | INFO     | -- intersect: -38551698192.97966
[2025-06-03 19:51:46] 2025-06-03 17:51:06,040 | INFO     | intersect: -38551698192.97966
[2025-06-03 19:51:46] 2025-06-03 17:51:06,041 | INFO     | chi2: 1.8388116953200908
[2025-06-03 19:51:46] 2025-06-03 17:51:06,041 | INFO     | current chi2=1.8388116953200908 (change=-0.10146017393426368 %)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,041 | INFO     | right removable region: 143
[2025-06-03 19:51:46] 2025-06-03 17:51:06,041 | INFO     | sum of square deviations: 1025693650.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,042 | INFO     | sum of deviations: -14951237677.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,042 | INFO     | mean x: 1748968525.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,042 | INFO     | mean y: 2333043.2080536913
[2025-06-03 19:51:46] 2025-06-03 17:51:06,042 | INFO     | -- intersect: 25496537971.61637
[2025-06-03 19:51:46] 2025-06-03 17:51:06,042 | INFO     | intersect: 25496537971.61637
[2025-06-03 19:51:46] 2025-06-03 17:51:06,043 | INFO     | chi2: 0.7179738970118699
[2025-06-03 19:51:46] 2025-06-03 17:51:06,043 | INFO     | current chi2=0.7179738970118699 (change=71.51974092602615 %)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,043 | INFO     | sum of square deviations: 925859220.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,044 | INFO     | sum of deviations: -14931581860.5
[2025-06-03 19:51:46] 2025-06-03 17:51:06,044 | INFO     | mean x: 1748968677.5
[2025-06-03 19:51:46] 2025-06-03 17:51:06,044 | INFO     | mean y: 2333010.6875
[2025-06-03 19:51:46] 2025-06-03 17:51:06,044 | INFO     | -- intersect: 28208423543.049076
[2025-06-03 19:51:46] 2025-06-03 17:51:06,044 | INFO     | intersect: 28208423543.049076
[2025-06-03 19:51:46] 2025-06-03 17:51:06,045 | INFO     | chi2: 0.7165859409095211
[2025-06-03 19:51:46] 2025-06-03 17:51:06,045 | INFO     | current chi2=0.7165859409095211 (change=0.19331567737006708 %)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,045 | INFO     | left removable region: 20
[2025-06-03 19:51:46] 2025-06-03 17:51:06,045 | INFO     | sum of square deviations: 576985702.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,046 | INFO     | sum of deviations: -5059833002.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,046 | INFO     | mean x: 1748968647.0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,046 | INFO     | mean y: 2346834.1219512196
[2025-06-03 19:51:46] 2025-06-03 17:51:06,046 | INFO     | -- intersect: 15339796703.120419
[2025-06-03 19:51:46] 2025-06-03 17:51:06,046 | INFO     | intersect: 15339796703.120419
[2025-06-03 19:51:46] 2025-06-03 17:51:06,046 | INFO     | chi2: 0.004544015731289466
[2025-06-03 19:51:46] 2025-06-03 17:51:06,046 | INFO     | -- intersect: 15339796703.120419
[2025-06-03 19:51:46] 2025-06-03 17:51:06,047 | INFO     | current memory leak: -8.77 B/s (using 123 data points, chi2=0.00)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,047 | INFO     | ..............................
[2025-06-03 19:51:46] 2025-06-03 17:51:06,047 | INFO     | . Timing measurements:
[2025-06-03 19:51:46] 2025-06-03 17:51:06,047 | INFO     | . get job = 0 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,047 | INFO     | . initial setup = 1 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,048 | INFO     | . payload setup = 8 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,048 | INFO     | . stage-in = 0 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,048 | INFO     | . payload execution = 9355 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,048 | INFO     | . stage-out = 0 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,048 | INFO     | . log creation = 0 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,048 | INFO     | ..............................
[2025-06-03 19:51:46] 2025-06-03 17:51:06,158 | INFO     | 
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | job summary report
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | --------------------------------------------------
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | PanDA job id: 6677379649
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | task id: 45006595
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | errors: (none)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | pilot state: finished 
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | transexitcode: 0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,159 | INFO     | exeerrorcode: 0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | exeerrordiag: 
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | exitcode: 0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | exitmsg: OK
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | cpuconsumptiontime: 35902 s
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | nevents: 400
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | neventsw: 0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | pid: 1965425
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | pgrp: 1965425
[2025-06-03 19:51:46] 2025-06-03 17:51:06,160 | INFO     | corecount: 4
[2025-06-03 19:51:46] 2025-06-03 17:51:06,161 | INFO     | event service: False
[2025-06-03 19:51:46] 2025-06-03 17:51:06,161 | INFO     | sizes: {0: 2405073, 1: 2405215, 6: 2405421, 11: 2405449, 9367: 2433539, 9368: 2433538, 9369: 2442741, 9373: 2442855}
[2025-06-03 19:51:46] 2025-06-03 17:51:06,161 | INFO     | --------------------------------------------------
[2025-06-03 19:51:46] 2025-06-03 17:51:06,161 | INFO     | 
[2025-06-03 19:51:46] 2025-06-03 17:51:06,161 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-03 19:51:46] 2025-06-03 17:51:06,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:51:46] 2025-06-03 17:51:06,186 | INFO     | job 6677379649 has completed (purged errors)
[2025-06-03 19:51:46] 2025-06-03 17:51:06,186 | INFO     | overall cleanup function is called
[2025-06-03 19:51:46] 2025-06-03 17:51:07,194 | INFO     | --- collectZombieJob: --- 10, [1965425]
[2025-06-03 19:51:46] 2025-06-03 17:51:07,195 | INFO     | zombie collector waiting for pid 1965425
[2025-06-03 19:51:46] 2025-06-03 17:51:07,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:51:46] 2025-06-03 17:51:07,195 | INFO     | collected zombie processes
[2025-06-03 19:51:46] 2025-06-03 17:51:07,195 | INFO     | will attempt to kill all subprocesses of pid=1965425
[2025-06-03 19:51:46] 2025-06-03 17:51:07,561 | INFO     | process IDs to be killed: [1965425] (in reverse order)
[2025-06-03 19:51:46] 2025-06-03 17:51:07,675 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:51:46] 2025-06-03 17:51:07,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:51:46] 2025-06-03 17:51:07,687 | INFO     | did not find any defunct processes belonging to 1965425
[2025-06-03 19:51:46] 2025-06-03 17:51:07,699 | INFO     | did not find any defunct processes belonging to 1965425
[2025-06-03 19:51:46] 2025-06-03 17:51:07,699 | INFO     | ready for new job
[2025-06-03 19:51:46] 2025-06-03 17:51:07,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:51:46] 2025-06-03 17:51:07,701 | INFO     | **************************************
[2025-06-03 19:51:46] 2025-06-03 17:51:07,701 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:51:46] 2025-06-03 17:51:07,701 | INFO     | **************************************
[2025-06-03 19:51:46] 2025-06-03 17:51:07,701 | INFO     | 
[2025-06-03 19:51:46] 2025-06-03 17:51:07,706 | INFO     | architecture information:
[2025-06-03 19:51:46] 2025-06-03 17:51:07,706 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:51:46] 2025-06-03 17:51:07,724 | INFO     | cat /etc/os-release:
[2025-06-03 19:51:46] NAME="CentOS Linux"
[2025-06-03 19:51:46] VERSION="7 (Core)"
[2025-06-03 19:51:46] ID="centos"
[2025-06-03 19:51:46] ID_LIKE="rhel fedora"
[2025-06-03 19:51:46] VERSION_ID="7"
[2025-06-03 19:51:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:51:46] ANSI_COLOR="0;31"
[2025-06-03 19:51:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:51:46] HOME_URL="https://www.centos.org/"
[2025-06-03 19:51:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:51:46] 
[2025-06-03 19:51:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:51:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:51:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:51:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:51:46] 
[2025-06-03 19:51:46] 2025-06-03 17:51:07,724 | INFO     | **************************************
[2025-06-03 19:51:46] 2025-06-03 17:51:08,227 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-03 19:51:46] 2025-06-03 17:51:08,244 | INFO     | sufficient remaining disk space (645119606784 B)
[2025-06-03 19:51:46] 2025-06-03 17:51:08,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:51:46] 2025-06-03 17:51:08,245 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:51:46] 2025-06-03 17:51:08,245 | INFO     | update_server=False
[2025-06-03 19:51:46] 2025-06-03 17:51:08,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:51:46] 2025-06-03 17:51:08,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 17:51:08,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 17:51:08,247 | INFO     | aborting loop
[2025-06-03 19:51:46] 2025-06-03 17:51:08,308 | INFO     | all data control threads have been joined
[2025-06-03 19:51:46] 2025-06-03 17:51:08,350 | INFO     | all payload control threads have been joined
[2025-06-03 19:51:46] 2025-06-03 17:51:08,395 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:51:46] 2025-06-03 17:51:08,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:51:46] 2025-06-03 17:51:08,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:51:46] 2025-06-03 17:51:09,251 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:09,252 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:09,309 | INFO     | [data] control thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:09,356 | INFO     | [payload] control thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:09,388 | INFO     | all job control threads have been joined
[2025-06-03 19:51:46] 2025-06-03 17:51:09,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 17:51:09,479 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:09,496 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:09,860 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:10,011 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:10,098 | INFO     | [job] validate thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:10,393 | INFO     | [job] control thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:10,485 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:10,585 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:11,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:51:46] 2025-06-03 17:51:11,469 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:12,170 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:12,252 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:18,401 | INFO     | job.realtimelogging is not enabled
[2025-06-03 19:51:46] 2025-06-03 17:51:19,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:51:46] 2025-06-03 17:51:20,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22898300254016)>', '<ExcThread(monitor, started 22898049754880)>']
[2025-06-03 19:51:46] 2025-06-03 17:51:21,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:51:46] 2025-06-03 17:51:21,434 | INFO     | [monitor] control thread has ended
[2025-06-03 19:51:46] 2025-06-03 17:51:25,984 | INFO     | all workflow threads have been joined
[2025-06-03 19:51:46] 2025-06-03 17:51:25,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:51:46] 2025-06-03 17:51:25,985 | INFO     | traces error code: 0
[2025-06-03 19:51:46] 2025-06-03 17:51:25,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:51:46] 2025-06-03 17:51:26,162 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:51:46] 2025-06-03 17:51:26,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:51:46] 2025-06-03 17:51:26,168 [wrapper] pilotpid: 1958481
[2025-06-03 19:51:46] 2025-06-03 17:51:26,171 [wrapper] Pilot exit status: 0
[2025-06-03 19:51:46] 2025-06-03 17:51:26,182 [wrapper] pandaids: 6677379649
[2025-06-03 19:51:46] 2025-06-03 17:51:26,252 [wrapper] cleanup supervisor_pilot 2243578 1958482
[2025-06-03 19:51:46] 2025-06-03 17:51:26,254 [wrapper] Test setup, not cleaning
[2025-06-03 19:51:46] 2025-06-03 17:51:26,257 [wrapper] apfmon messages muted
[2025-06-03 19:51:46] 2025-06-03 17:51:26,260 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:51:46] 2025-06-03 17:51:26,263 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:51:46]  *** Error codes and diagnostics ***
[2025-06-03 19:51:46]     "exeErrorCode": 0,
[2025-06-03 19:51:46]     "exeErrorDiag": "",
[2025-06-03 19:51:46]     "pilotErrorCode": 0,
[2025-06-03 19:51:46]     "pilotErrorDiag": "",
[2025-06-03 19:51:46]  *** Listing of results directory ***
[2025-06-03 19:51:46] total 388804
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 19:51:46] -rwx------ 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:52 queuedata.json
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc       100 Jun  3 17:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:51:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 17:14 run_atlas
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc       105 Jun  3 17:14 job.xml
[2025-06-03 19:51:46] -rw-r--r-- 2 boinc boinc 214348756 Jun  3 17:14 EVNT.45006593._000069.pool.root.1
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc      6635 Jun  3 17:14 init_data.xml
[2025-06-03 19:51:46] -rw-r--r-- 2 boinc boinc     15093 Jun  3 17:14 start_atlas.sh
[2025-06-03 19:51:46] drwxrwx--x 2 boinc boinc      4096 Jun  3 17:14 shared
[2025-06-03 19:51:46] -rw-r--r-- 2 boinc boinc    508874 Jun  3 17:14 input.tar.gz
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc         0 Jun  3 17:14 boinc_lockfile
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc      2521 Jun  3 17:14 pandaJob.out
[2025-06-03 19:51:46] -rw------- 1 boinc boinc    982724 Jun  3 17:14 agis_schedconf.cvmfs.json
[2025-06-03 19:51:46] -rw------- 1 boinc boinc   1603667 Jun  3 17:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:51:46] drwx------ 4 boinc boinc      4096 Jun  3 17:14 pilot3
[2025-06-03 19:51:46] -rw------- 1 boinc boinc 177610834 Jun  3 19:50 HITS.45006595._001707.pool.root.1
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc       528 Jun  3 19:50 boinc_task_state.xml
[2025-06-03 19:51:46] -rw------- 1 boinc boinc      1036 Jun  3 19:50 memory_monitor_summary.json
[2025-06-03 19:51:46] -rw------- 1 boinc boinc    281156 Jun  3 19:51 log.45006595._001707.job.log.tgz.1
[2025-06-03 19:51:46] -rw------- 1 boinc boinc        95 Jun  3 19:51 pilot_heartbeat.json
[2025-06-03 19:51:46] -rw------- 1 boinc boinc      7721 Jun  3 19:51 heartbeat.json
[2025-06-03 19:51:46] -rw------- 1 boinc boinc      4435 Jun  3 19:51 pilotlog.txt
[2025-06-03 19:51:46] -rw------- 1 boinc boinc    889513 Jun  3 19:51 log.45006595._001707.job.log.1
[2025-06-03 19:51:46] -rw------- 1 boinc boinc       357 Jun  3 19:51 output.list
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc       620 Jun  3 19:51 runtime_log
[2025-06-03 19:51:46] -rw------- 1 boinc boinc   1187840 Jun  3 19:51 result.tar.gz
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc      9025 Jun  3 19:51 runtime_log.err
[2025-06-03 19:51:46] -rw------- 1 boinc boinc       662 Jun  3 19:51 m3XKDm3bMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg8eKDmELKhvm.diag
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc        26 Jun  3 19:51 wrapper_checkpoint.txt
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc      8192 Jun  3 19:51 boinc_mmap_file
[2025-06-03 19:51:46] -rw-r--r-- 1 boinc boinc     20586 Jun  3 19:51 stderr.txt
[2025-06-03 19:51:46] HITS file was successfully produced:
[2025-06-03 19:51:46] -rw------- 1 boinc boinc 177610834 Jun  3 19:50 shared/HITS.pool.root.1
[2025-06-03 19:51:46]  *** Contents of shared directory: ***
[2025-06-03 19:51:46] total 384464
[2025-06-03 19:51:46] -rw-r--r-- 2 boinc boinc 214348756 Jun  3 17:14 ATLAS.root_0
[2025-06-03 19:51:46] -rw-r--r-- 2 boinc boinc     15093 Jun  3 17:14 start_atlas.sh
[2025-06-03 19:51:46] -rw-r--r-- 2 boinc boinc    508874 Jun  3 17:14 input.tar.gz
[2025-06-03 19:51:46] -rw------- 1 boinc boinc 177610834 Jun  3 19:50 HITS.pool.root.1
[2025-06-03 19:51:46] -rw------- 1 boinc boinc   1187840 Jun  3 19:51 result.tar.gz
19:51:47 (1954801): run_atlas exited; CPU time 36257.508416
19:51:47 (1954801): called boinc_finish(0)

</stderr_txt>
]]>

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