Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:06:12 (19421): wrapper (7.7.26015): starting
07:06:12 (19421): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:06:12] Arguments: --nthreads 8
[2025-06-03 07:06:12] Threads: 8
[2025-06-03 07:06:12] Checking for CVMFS
[2025-06-03 07:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:06:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:06:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:06:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:06:14] 2.11.2.0 25755 31507 98968 146729 0 194 14786272 25165825 4632 130560 0 17128536 99.808 16817893 2329 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:06:14] CVMFS is ok
[2025-06-03 07:06:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:06:14] Checking for apptainer binary...
[2025-06-03 07:06:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:06:14] Running /usr/bin/apptainer --version
[2025-06-03 07:06:14] apptainer version 1.3.2-1.el7
[2025-06-03 07:06:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:10:47] cg-vwn458.simple-grid.lan
[2025-06-03 07:10:47] apptainer works
[2025-06-03 07:10:47] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:10:47] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:10:47] Starting ATLAS job with PandaID=6677379127
[2025-06-03 07:10:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:45:07]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:45:07] 2025-06-03 08:35:44,024 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6677379127/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:45:07] 2025-06-03 08:35:44,025 | INFO     | extracted standard info from prmon json
[2025-06-03 10:45:07] 2025-06-03 08:35:44,025 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:45:07] 2025-06-03 08:35:44,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:45:07] 2025-06-03 08:35:44,026 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:45:07] 2025-06-03 08:35:44,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:45:07] 2025-06-03 08:35:44,030 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:45:07] 2025-06-03 08:35:44,031 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,032 | INFO     | sum of deviations: -48419978844.99999
[2025-06-03 10:45:07] 2025-06-03 08:35:44,032 | INFO     | mean x: 1748933574.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,032 | INFO     | mean y: 2542291.1256281408
[2025-06-03 10:45:07] 2025-06-03 08:35:44,032 | INFO     | -- intersect: 34657966871.28794
[2025-06-03 10:45:07] 2025-06-03 08:35:44,032 | INFO     | intersect: 34657966871.28794
[2025-06-03 10:45:07] 2025-06-03 08:35:44,033 | INFO     | chi2: 2.5339039233968537
[2025-06-03 10:45:07] 2025-06-03 08:35:44,033 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 10:45:07] 2025-06-03 08:35:44,034 | INFO     | sum of deviations: -33306620827.500004
[2025-06-03 10:45:07] 2025-06-03 08:35:44,035 | INFO     | mean x: 1748933421.5
[2025-06-03 10:45:07] 2025-06-03 08:35:44,035 | INFO     | mean y: 2554898.149484536
[2025-06-03 10:45:07] 2025-06-03 08:35:44,035 | INFO     | -- intersect: 25732080316.197254
[2025-06-03 10:45:07] 2025-06-03 08:35:44,035 | INFO     | intersect: 25732080316.197254
[2025-06-03 10:45:07] 2025-06-03 08:35:44,044 | INFO     | chi2: 1.7687019765374927
[2025-06-03 10:45:07] 2025-06-03 08:35:44,044 | INFO     | current chi2=1.7687019765374927 (change=30.198538302650434 %)
[2025-06-03 10:45:07] 2025-06-03 08:35:44,044 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,046 | INFO     | sum of deviations: -31496996870.999996
[2025-06-03 10:45:07] 2025-06-03 08:35:44,046 | INFO     | mean x: 1748933269.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,046 | INFO     | mean y: 2556516.3492063493
[2025-06-03 10:45:07] 2025-06-03 08:35:44,046 | INFO     | -- intersect: 26316789047.842327
[2025-06-03 10:45:07] 2025-06-03 08:35:44,046 | INFO     | intersect: 26316789047.842327
[2025-06-03 10:45:07] 2025-06-03 08:35:44,046 | INFO     | chi2: 1.7666311345860664
[2025-06-03 10:45:07] 2025-06-03 08:35:44,047 | INFO     | current chi2=1.7666311345860664 (change=0.11708258253209877 %)
[2025-06-03 10:45:07] 2025-06-03 08:35:44,047 | INFO     | right removable region: 188
[2025-06-03 10:45:07] 2025-06-03 08:35:44,047 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 10:45:07] 2025-06-03 08:35:44,048 | INFO     | sum of deviations: -80027479290.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,048 | INFO     | mean x: 1748933726.5
[2025-06-03 10:45:07] 2025-06-03 08:35:44,049 | INFO     | mean y: 2568832.7422680412
[2025-06-03 10:45:07] 2025-06-03 08:35:44,049 | INFO     | -- intersect: 61824193796.852325
[2025-06-03 10:45:07] 2025-06-03 08:35:44,049 | INFO     | intersect: 61824193796.852325
[2025-06-03 10:45:07] 2025-06-03 08:35:44,049 | INFO     | chi2: 0.9899190157373082
[2025-06-03 10:45:07] 2025-06-03 08:35:44,049 | INFO     | current chi2=0.9899190157373082 (change=60.933048542335364 %)
[2025-06-03 10:45:07] 2025-06-03 08:35:44,049 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,051 | INFO     | sum of deviations: -77997265822.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,051 | INFO     | mean x: 1748933879.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,051 | INFO     | mean y: 2566981.8835978834
[2025-06-03 10:45:07] 2025-06-03 08:35:44,051 | INFO     | -- intersect: 65165570106.41915
[2025-06-03 10:45:07] 2025-06-03 08:35:44,051 | INFO     | intersect: 65165570106.41915
[2025-06-03 10:45:07] 2025-06-03 08:35:44,051 | INFO     | chi2: 0.9732426387107282
[2025-06-03 10:45:07] 2025-06-03 08:35:44,052 | INFO     | current chi2=0.9732426387107282 (change=1.6846203337309504 %)
[2025-06-03 10:45:07] 2025-06-03 08:35:44,052 | INFO     | left removable region: 20
[2025-06-03 10:45:07] 2025-06-03 08:35:44,052 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,053 | INFO     | sum of deviations: -51161386036.50001
[2025-06-03 10:45:07] 2025-06-03 08:35:44,053 | INFO     | mean x: 1748933848.5
[2025-06-03 10:45:07] 2025-06-03 08:35:44,053 | INFO     | mean y: 2574193.9226190476
[2025-06-03 10:45:07] 2025-06-03 08:35:44,053 | INFO     | -- intersect: 60861572967.635155
[2025-06-03 10:45:07] 2025-06-03 08:35:44,054 | INFO     | intersect: 60861572967.635155
[2025-06-03 10:45:07] 2025-06-03 08:35:44,054 | INFO     | chi2: 0.16973620044342336
[2025-06-03 10:45:07] 2025-06-03 08:35:44,054 | INFO     | -- intersect: 60861572967.635155
[2025-06-03 10:45:07] 2025-06-03 08:35:44,054 | INFO     | current memory leak: -34.80 B/s (using 168 data points, chi2=0.17)
[2025-06-03 10:45:07] 2025-06-03 08:35:44,055 | INFO     | ..............................
[2025-06-03 10:45:07] 2025-06-03 08:35:44,055 | INFO     | . Timing measurements:
[2025-06-03 10:45:07] 2025-06-03 08:35:44,055 | INFO     | . get job = 0 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,055 | INFO     | . initial setup = 2 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,055 | INFO     | . payload setup = 20 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,055 | INFO     | . stage-in = 0 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,056 | INFO     | . payload execution = 12128 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,056 | INFO     | . stage-out = 4 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,056 | INFO     | . log creation = 1 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,056 | INFO     | ..............................
[2025-06-03 10:45:07] 2025-06-03 08:35:44,672 | INFO     | 
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | job summary report
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | --------------------------------------------------
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | PanDA job id: 6677379127
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | task id: 45006595
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | errors: (none)
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | pilot state: finished 
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | transexitcode: 0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,673 | INFO     | exeerrorcode: 0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | exeerrordiag: 
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | exitcode: 0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | exitmsg: OK
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | cpuconsumptiontime: 45790 s
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | nevents: 400
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | neventsw: 0
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | pid: 3430
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | pgrp: 3430
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | corecount: 8
[2025-06-03 10:45:07] 2025-06-03 08:35:44,674 | INFO     | event service: False
[2025-06-03 10:45:07] 2025-06-03 08:35:44,675 | INFO     | sizes: {0: 2405006, 1: 2405205, 9: 2405411, 12: 2405439, 12153: 2434386, 12159: 2443513, 12255: 2443627}
[2025-06-03 10:45:07] 2025-06-03 08:35:44,675 | INFO     | --------------------------------------------------
[2025-06-03 10:45:07] 2025-06-03 08:35:44,675 | INFO     | 
[2025-06-03 10:45:07] 2025-06-03 08:35:44,675 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-03 10:45:07] 2025-06-03 08:35:45,031 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,031 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,031 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,031 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:45:07] 2025-06-03 08:35:45,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:45:07] 2025-06-03 08:35:45,033 | INFO     | job 6677379127 has completed (purged errors)
[2025-06-03 10:45:07] 2025-06-03 08:35:45,033 | INFO     | overall cleanup function is called
[2025-06-03 10:45:07] 2025-06-03 08:35:46,042 | INFO     | --- collectZombieJob: --- 10, [3430]
[2025-06-03 10:45:07] 2025-06-03 08:35:46,042 | INFO     | zombie collector waiting for pid 3430
[2025-06-03 10:45:07] 2025-06-03 08:35:46,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:45:07] 2025-06-03 08:35:46,043 | INFO     | collected zombie processes
[2025-06-03 10:45:07] 2025-06-03 08:35:46,043 | INFO     | will attempt to kill all subprocesses of pid=3430
[2025-06-03 10:45:07] 2025-06-03 08:35:46,149 | INFO     | process IDs to be killed: [3430] (in reverse order)
[2025-06-03 10:45:07] 2025-06-03 08:35:46,388 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:45:07] 2025-06-03 08:35:46,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:45:07] 2025-06-03 08:35:46,392 | INFO     | did not find any defunct processes belonging to 3430
[2025-06-03 10:45:07] 2025-06-03 08:35:46,395 | INFO     | did not find any defunct processes belonging to 3430
[2025-06-03 10:45:07] 2025-06-03 08:35:46,395 | INFO     | ready for new job
[2025-06-03 10:45:07] 2025-06-03 08:35:46,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:45:07] 2025-06-03 08:35:46,397 | INFO     | **************************************
[2025-06-03 10:45:07] 2025-06-03 08:35:46,397 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:45:07] 2025-06-03 08:35:46,397 | INFO     | **************************************
[2025-06-03 10:45:07] 2025-06-03 08:35:46,397 | INFO     | 
[2025-06-03 10:45:07] 2025-06-03 08:35:46,398 | INFO     | pilot is running in a VM
[2025-06-03 10:45:07] 2025-06-03 08:35:46,398 | INFO     | architecture information:
[2025-06-03 10:45:07] 2025-06-03 08:35:46,401 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:45:07] 2025-06-03 08:35:46,601 | INFO     | cat /etc/os-release:
[2025-06-03 10:45:07] NAME="CentOS Linux"
[2025-06-03 10:45:07] VERSION="7 (Core)"
[2025-06-03 10:45:07] ID="centos"
[2025-06-03 10:45:07] ID_LIKE="rhel fedora"
[2025-06-03 10:45:07] VERSION_ID="7"
[2025-06-03 10:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:45:07] ANSI_COLOR="0;31"
[2025-06-03 10:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:45:07] HOME_URL="https://www.centos.org/"
[2025-06-03 10:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:45:07] 
[2025-06-03 10:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:45:07] 
[2025-06-03 10:45:07] 2025-06-03 08:35:46,601 | INFO     | **************************************
[2025-06-03 10:45:07] 2025-06-03 08:35:47,104 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-03 10:45:07] 2025-06-03 08:35:47,332 | INFO     | sufficient remaining disk space (496982032384 B)
[2025-06-03 10:45:07] 2025-06-03 08:35:47,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:45:07] 2025-06-03 08:35:47,332 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:45:07] 2025-06-03 08:35:47,332 | INFO     | update_server=False
[2025-06-03 10:45:07] 2025-06-03 08:35:47,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:45:07] 2025-06-03 08:35:47,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:45:07] 2025-06-03 08:35:47,333 | INFO     | aborting loop
[2025-06-03 10:45:07] 2025-06-03 08:35:47,467 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:45:07] 2025-06-03 08:35:47,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:45:07] 2025-06-03 08:35:47,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:45:07] 2025-06-03 08:35:47,805 | INFO     | all payload control threads have been joined
[2025-06-03 10:45:07] 2025-06-03 08:35:47,821 | INFO     | all data control threads have been joined
[2025-06-03 10:45:07] 2025-06-03 08:35:48,309 | INFO     | all job control threads have been joined
[2025-06-03 10:45:07] 2025-06-03 08:35:48,338 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:48,339 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:48,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:45:07] 2025-06-03 08:35:48,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:45:07] 2025-06-03 08:35:48,790 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:48,811 | INFO     | [payload] control thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:48,827 | INFO     | [data] control thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:48,875 | INFO     | [job] validate thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:48,957 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:49,203 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:45:07] 2025-06-03 08:35:49,315 | INFO     | [job] control thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:49,577 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:49,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:49,714 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:49,763 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:49,791 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:50,209 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:50,476 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:52,625 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:45:07] 2025-06-03 08:35:53,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139754782938944)>', '<ExcThread(monitor, started 139754184099584)>']
[2025-06-03 10:45:07] 2025-06-03 08:35:53,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:45:07] 2025-06-03 08:35:53,504 | INFO     | [monitor] control thread has ended
[2025-06-03 10:45:07] 2025-06-03 08:35:58,498 | INFO     | all workflow threads have been joined
[2025-06-03 10:45:07] 2025-06-03 08:35:58,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:45:07] 2025-06-03 08:35:58,499 | INFO     | traces error code: 0
[2025-06-03 10:45:07] 2025-06-03 08:35:58,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:45:07] 2025-06-03 08:35:58,711 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:45:07] 2025-06-03 08:35:58,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:45:07] 2025-06-03 08:35:58,720 [wrapper] pilotpid: 23203
[2025-06-03 10:45:07] 2025-06-03 08:35:58,723 [wrapper] Pilot exit status: 0
[2025-06-03 10:45:07] 2025-06-03 08:35:59,015 [wrapper] pandaids: 6677379127
[2025-06-03 10:45:07] 2025-06-03 08:35:59,613 [wrapper] cleanup supervisor_pilot 32592 23204
[2025-06-03 10:45:07] 2025-06-03 08:35:59,626 [wrapper] Test setup, not cleaning
[2025-06-03 10:45:07] 2025-06-03 08:35:59,640 [wrapper] apfmon messages muted
[2025-06-03 10:45:07] 2025-06-03 08:35:59,711 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:45:07] 2025-06-03 08:35:59,843 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:45:07]  *** Error codes and diagnostics ***
[2025-06-03 10:45:07]     "exeErrorCode": 0,
[2025-06-03 10:45:07]     "exeErrorDiag": "",
[2025-06-03 10:45:07]     "pilotErrorCode": 0,
[2025-06-03 10:45:07]     "pilotErrorDiag": "",
[2025-06-03 10:45:07]  *** Listing of results directory ***
[2025-06-03 10:45:07] total 392564
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 10:45:07] -rwx------. 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:45:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:06 run_atlas
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:06 job.xml
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc      6392 Jun  3 07:06 init_data.xml
[2025-06-03 10:45:07] -rw-r--r--. 2 boinc boinc 216267029 Jun  3 07:06 EVNT.45006593._000062.pool.root.1
[2025-06-03 10:45:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:06 start_atlas.sh
[2025-06-03 10:45:07] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:06 shared
[2025-06-03 10:45:07] -rw-r--r--. 2 boinc boinc    508872 Jun  3 07:06 input.tar.gz
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:06 boinc_lockfile
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc      2521 Jun  3 07:10 pandaJob.out
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc    988073 Jun  3 07:11 agis_schedconf.cvmfs.json
[2025-06-03 10:45:07] drwx------. 4 boinc boinc      4096 Jun  3 07:11 pilot3
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc 179002602 Jun  3 10:32 HITS.45006595._001547.pool.root.1
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:32 boinc_task_state.xml
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc      1016 Jun  3 10:33 memory_monitor_summary.json
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc   1603667 Jun  3 10:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc    378195 Jun  3 10:34 log.45006595._001547.job.log.tgz.1
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc        95 Jun  3 10:34 pilot_heartbeat.json
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc      7689 Jun  3 10:35 heartbeat.json
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc      4417 Jun  3 10:35 pilotlog.txt
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc   1070516 Jun  3 10:35 log.45006595._001547.job.log.1
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc       357 Jun  3 10:36 output.list
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:36 runtime_log
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc   1464320 Jun  3 10:36 result.tar.gz
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc      8673 Jun  3 10:36 runtime_log.err
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc       656 Jun  3 10:36 fUULDmvbMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS7eKDm7mjNKo.diag
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:45 boinc_mmap_file
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:45 wrapper_checkpoint.txt
[2025-06-03 10:45:07] -rw-r--r--. 1 boinc boinc     20478 Jun  3 10:45 stderr.txt
[2025-06-03 10:45:07] HITS file was successfully produced:
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc 179002602 Jun  3 10:32 shared/HITS.pool.root.1
[2025-06-03 10:45:07]  *** Contents of shared directory: ***
[2025-06-03 10:45:07] total 387956
[2025-06-03 10:45:07] -rw-r--r--. 2 boinc boinc 216267029 Jun  3 07:06 ATLAS.root_0
[2025-06-03 10:45:07] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:06 start_atlas.sh
[2025-06-03 10:45:07] -rw-r--r--. 2 boinc boinc    508872 Jun  3 07:06 input.tar.gz
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc 179002602 Jun  3 10:32 HITS.pool.root.1
[2025-06-03 10:45:07] -rw-------. 1 boinc boinc   1464320 Jun  3 10:36 result.tar.gz
10:45:09 (19421): run_atlas exited; CPU time 45927.158256
10:45:09 (19421): called boinc_finish(0)

</stderr_txt>
]]>

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