Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:26:40 (19317): wrapper (7.7.26015): starting
18:26:40 (19317): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 18:26:40] Arguments: --nthreads 8
[2025-06-02 18:26:40] Threads: 8
[2025-06-02 18:26:40] Checking for CVMFS
[2025-06-02 18:26:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:26:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:26:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:26:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:26:44] 2.11.2.0 11201 30579 90504 146710 3 170 13874734 25165825 4632 130560 0 15621440 99.791 18694379 2001 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 18:26:44] CVMFS is ok
[2025-06-02 18:26:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:26:44] Checking for apptainer binary...
[2025-06-02 18:26:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:26:44] Running /usr/bin/apptainer --version
[2025-06-02 18:26:44] apptainer version 1.3.2-1.el7
[2025-06-02 18:26:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:31:40] cg-vwn265.simple-grid.lan
[2025-06-02 18:31:40] apptainer works
[2025-06-02 18:31:40] Set ATHENA_PROC_NUMBER=8
[2025-06-02 18:31:40] Set ATHENA_CORE_NUMBER=8
[2025-06-02 18:31:40] Starting ATLAS job with PandaID=6677379801
[2025-06-02 18:31:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 22:37:37]  *** The last 200 lines of the pilot log: ***
[2025-06-02 22:37:37] 2025-06-02 20:26:08,111 | INFO     | extracted standard info from prmon json
[2025-06-02 22:37:37] 2025-06-02 20:26:08,111 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 22:37:37] 2025-06-02 20:26:08,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 22:37:37] 2025-06-02 20:26:08,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 22:37:37] 2025-06-02 20:26:08,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 22:37:37] 2025-06-02 20:26:08,116 | INFO     | fitting pss+swap vs Time
[2025-06-02 22:37:37] 2025-06-02 20:26:08,117 | INFO     | sum of square deviations: 3212467674.5
[2025-06-02 22:37:37] 2025-06-02 20:26:08,119 | INFO     | sum of deviations: 50538601778.499985
[2025-06-02 22:37:37] 2025-06-02 20:26:08,119 | INFO     | mean x: 1748889246.5
[2025-06-02 22:37:37] 2025-06-02 20:26:08,119 | INFO     | mean y: 2430196.243119266
[2025-06-02 22:37:37] 2025-06-02 20:26:08,119 | INFO     | -- intersect: -27511128270.091076
[2025-06-02 22:37:37] 2025-06-02 20:26:08,119 | INFO     | intersect: -27511128270.091076
[2025-06-02 22:37:37] 2025-06-02 20:26:08,120 | INFO     | chi2: 8.627400913417306
[2025-06-02 22:37:37] 2025-06-02 20:26:08,121 | INFO     | sum of square deviations: 2996454322.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,122 | INFO     | sum of deviations: 78734386467.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,122 | INFO     | mean x: 1748889094.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,122 | INFO     | mean y: 2449814.220657277
[2025-06-02 22:37:37] 2025-06-02 20:26:08,123 | INFO     | -- intersect: -45951098953.04718
[2025-06-02 22:37:37] 2025-06-02 20:26:08,123 | INFO     | intersect: -45951098953.04718
[2025-06-02 22:37:37] 2025-06-02 20:26:08,123 | INFO     | chi2: 7.127709459130244
[2025-06-02 22:37:37] 2025-06-02 20:26:08,123 | INFO     | current chi2=7.127709459130244 (change=17.3828881877362 %)
[2025-06-02 22:37:37] 2025-06-02 20:26:08,123 | INFO     | right removable region: 212
[2025-06-02 22:37:37] 2025-06-02 20:26:08,124 | INFO     | sum of square deviations: 2996454322.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,125 | INFO     | sum of deviations: -26147827876.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,125 | INFO     | mean x: 1748889399.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,125 | INFO     | mean y: 2484298.0375586855
[2025-06-02 22:37:37] 2025-06-02 20:26:08,126 | INFO     | -- intersect: 15263741125.303518
[2025-06-02 22:37:37] 2025-06-02 20:26:08,126 | INFO     | intersect: 15263741125.303518
[2025-06-02 22:37:37] 2025-06-02 20:26:08,126 | INFO     | chi2: 3.5274506941909536
[2025-06-02 22:37:37] 2025-06-02 20:26:08,126 | INFO     | current chi2=3.5274506941909536 (change=59.11340240714821 %)
[2025-06-02 22:37:37] 2025-06-02 20:26:08,126 | INFO     | sum of square deviations: 2790348132.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,128 | INFO     | sum of deviations: -67513487706.999985
[2025-06-02 22:37:37] 2025-06-02 20:26:08,128 | INFO     | mean x: 1748889551.5
[2025-06-02 22:37:37] 2025-06-02 20:26:08,128 | INFO     | mean y: 2514749.9134615385
[2025-06-02 22:37:37] 2025-06-02 20:26:08,128 | INFO     | -- intersect: 42317533396.51722
[2025-06-02 22:37:37] 2025-06-02 20:26:08,129 | INFO     | intersect: 42317533396.51722
[2025-06-02 22:37:37] 2025-06-02 20:26:08,129 | INFO     | chi2: 1.905865557350969
[2025-06-02 22:37:37] 2025-06-02 20:26:08,129 | INFO     | current chi2=1.905865557350969 (change=45.97045507993718 %)
[2025-06-02 22:37:37] 2025-06-02 20:26:08,129 | INFO     | sum of square deviations: 2593916542.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,131 | INFO     | sum of deviations: -68498664669.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,131 | INFO     | mean x: 1748889704.0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,131 | INFO     | mean y: 2515456.6502463054
[2025-06-02 22:37:37] 2025-06-02 20:26:08,131 | INFO     | -- intersect: 46186194629.687675
[2025-06-02 22:37:37] 2025-06-02 20:26:08,131 | INFO     | intersect: 46186194629.687675
[2025-06-02 22:37:37] 2025-06-02 20:26:08,132 | INFO     | chi2: 1.8691469482281629
[2025-06-02 22:37:37] 2025-06-02 20:26:08,132 | INFO     | current chi2=1.8691469482281629 (change=1.9266106668007967 %)
[2025-06-02 22:37:37] 2025-06-02 20:26:08,132 | INFO     | left removable region: 30
[2025-06-02 22:37:37] 2025-06-02 20:26:08,132 | INFO     | sum of square deviations: 1869302025.5
[2025-06-02 22:37:37] 2025-06-02 20:26:08,133 | INFO     | sum of deviations: -20700058633.49999
[2025-06-02 22:37:37] 2025-06-02 20:26:08,134 | INFO     | mean x: 1748889978.5
[2025-06-02 22:37:37] 2025-06-02 20:26:08,134 | INFO     | mean y: 2521776.8296703296
[2025-06-02 22:37:37] 2025-06-02 20:26:08,134 | INFO     | -- intersect: 19369175535.63422
[2025-06-02 22:37:37] 2025-06-02 20:26:08,134 | INFO     | intersect: 19369175535.63422
[2025-06-02 22:37:37] 2025-06-02 20:26:08,134 | INFO     | chi2: 0.131622542768773
[2025-06-02 22:37:37] 2025-06-02 20:26:08,134 | INFO     | -- intersect: 19369175535.63422
[2025-06-02 22:37:37] 2025-06-02 20:26:08,135 | INFO     | current memory leak: -11.07 B/s (using 182 data points, chi2=0.13)
[2025-06-02 22:37:37] 2025-06-02 20:26:08,135 | INFO     | ..............................
[2025-06-02 22:37:37] 2025-06-02 20:26:08,135 | INFO     | . Timing measurements:
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | . get job = 0 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | . initial setup = 7 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | . payload setup = 168 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | . stage-in = 0 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | . payload execution = 13404 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | . stage-out = 5 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | . log creation = 1 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,136 | INFO     | ..............................
[2025-06-02 22:37:37] 2025-06-02 20:26:08,604 | INFO     | 
[2025-06-02 22:37:37] 2025-06-02 20:26:08,604 | INFO     | job summary report
[2025-06-02 22:37:37] 2025-06-02 20:26:08,604 | INFO     | --------------------------------------------------
[2025-06-02 22:37:37] 2025-06-02 20:26:08,604 | INFO     | PanDA job id: 6677379801
[2025-06-02 22:37:37] 2025-06-02 20:26:08,604 | INFO     | task id: 45006595
[2025-06-02 22:37:37] 2025-06-02 20:26:08,604 | INFO     | errors: (none)
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | pilot state: finished 
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | transexitcode: 0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | exeerrorcode: 0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | exeerrordiag: 
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | exitcode: 0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | exitmsg: OK
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | cpuconsumptiontime: 49458 s
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | nevents: 400
[2025-06-02 22:37:37] 2025-06-02 20:26:08,605 | INFO     | neventsw: 0
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | pid: 5225
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | pgrp: 5225
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | corecount: 8
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | event service: False
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | sizes: {0: 2405005, 1: 2405204, 12: 2405204, 23: 2405232, 34: 2405260, 44: 2405288, 55: 2405444, 66: 2405472, 77: 2405500, 87: 2405556, 95: 2405790, 98: 2406098, 1
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | --------------------------------------------------
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | 
[2025-06-02 22:37:37] 2025-06-02 20:26:08,606 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-02 22:37:37] 2025-06-02 20:26:09,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 22:37:37] 2025-06-02 20:26:09,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 22:37:37] 2025-06-02 20:26:09,070 | INFO     | job 6677379801 has completed (purged errors)
[2025-06-02 22:37:37] 2025-06-02 20:26:09,070 | INFO     | overall cleanup function is called
[2025-06-02 22:37:37] 2025-06-02 20:26:10,080 | INFO     | --- collectZombieJob: --- 10, [5225]
[2025-06-02 22:37:37] 2025-06-02 20:26:10,080 | INFO     | zombie collector waiting for pid 5225
[2025-06-02 22:37:37] 2025-06-02 20:26:10,080 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 22:37:37] 2025-06-02 20:26:10,080 | INFO     | collected zombie processes
[2025-06-02 22:37:37] 2025-06-02 20:26:10,080 | INFO     | will attempt to kill all subprocesses of pid=5225
[2025-06-02 22:37:37] 2025-06-02 20:26:10,210 | INFO     | process IDs to be killed: [5225] (in reverse order)
[2025-06-02 22:37:37] 2025-06-02 20:26:10,992 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 22:37:37] 2025-06-02 20:26:10,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 22:37:37] 2025-06-02 20:26:10,996 | INFO     | did not find any defunct processes belonging to 5225
[2025-06-02 22:37:37] 2025-06-02 20:26:10,999 | INFO     | did not find any defunct processes belonging to 5225
[2025-06-02 22:37:37] 2025-06-02 20:26:11,000 | INFO     | ready for new job
[2025-06-02 22:37:37] 2025-06-02 20:26:11,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 22:37:37] 2025-06-02 20:26:11,005 | INFO     | **************************************
[2025-06-02 22:37:37] 2025-06-02 20:26:11,006 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 22:37:37] 2025-06-02 20:26:11,006 | INFO     | **************************************
[2025-06-02 22:37:37] 2025-06-02 20:26:11,006 | INFO     | 
[2025-06-02 22:37:37] 2025-06-02 20:26:11,006 | INFO     | pilot is running in a VM
[2025-06-02 22:37:37] 2025-06-02 20:26:11,007 | INFO     | architecture information:
[2025-06-02 22:37:37] 2025-06-02 20:26:11,014 | INFO     | executing command: cat /etc/os-release
[2025-06-02 22:37:37] 2025-06-02 20:26:11,273 | INFO     | cat /etc/os-release:
[2025-06-02 22:37:37] NAME="CentOS Linux"
[2025-06-02 22:37:37] VERSION="7 (Core)"
[2025-06-02 22:37:37] ID="centos"
[2025-06-02 22:37:37] ID_LIKE="rhel fedora"
[2025-06-02 22:37:37] VERSION_ID="7"
[2025-06-02 22:37:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 22:37:37] ANSI_COLOR="0;31"
[2025-06-02 22:37:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 22:37:37] HOME_URL="https://www.centos.org/"
[2025-06-02 22:37:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 22:37:37] 
[2025-06-02 22:37:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 22:37:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 22:37:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 22:37:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 22:37:37] 
[2025-06-02 22:37:37] 2025-06-02 20:26:11,273 | INFO     | **************************************
[2025-06-02 22:37:37] 2025-06-02 20:26:11,777 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-02 22:37:37] 2025-06-02 20:26:12,063 | INFO     | sufficient remaining disk space (496802725888 B)
[2025-06-02 22:37:37] 2025-06-02 20:26:12,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 22:37:37] 2025-06-02 20:26:12,064 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 22:37:37] 2025-06-02 20:26:12,064 | INFO     | update_server=False
[2025-06-02 22:37:37] 2025-06-02 20:26:12,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 22:37:37] 2025-06-02 20:26:12,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:37:37] 2025-06-02 20:26:12,065 | INFO     | aborting loop
[2025-06-02 22:37:37] 2025-06-02 20:26:12,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 22:37:37] 2025-06-02 20:26:12,072 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-02 22:37:37] 2025-06-02 20:26:12,072 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 22:37:37] 2025-06-02 20:26:12,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 22:37:37] 2025-06-02 20:26:12,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 22:37:37] 2025-06-02 20:26:12,641 | INFO     | all payload control threads have been joined
[2025-06-02 22:37:37] 2025-06-02 20:26:13,021 | INFO     | all data control threads have been joined
[2025-06-02 22:37:37] 2025-06-02 20:26:13,070 | INFO     | [job] retrieve thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:13,071 | INFO     | [job] job monitor thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:13,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:37:37] 2025-06-02 20:26:13,401 | INFO     | [job] validate thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:13,565 | INFO     | [data] copytool_in thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:13,607 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:13,618 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:13,647 | INFO     | [payload] control thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:13,662 | INFO     | all job control threads have been joined
[2025-06-02 22:37:37] 2025-06-02 20:26:13,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 22:37:37] 2025-06-02 20:26:13,847 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:14,005 | INFO     | [payload] failed_post thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:14,027 | INFO     | [data] control thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:14,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:14,073 | INFO     | [data] copytool_out thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:14,185 | INFO     | [payload] validate_post thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:14,286 | INFO     | [job] queue monitor thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:14,668 | INFO     | [job] control thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:17,814 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 22:37:37] 2025-06-02 20:26:18,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233401935680)>', '<ExcThread(monitor, started 140232804517632)>']
[2025-06-02 22:37:37] 2025-06-02 20:26:18,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 22:37:37] 2025-06-02 20:26:18,108 | INFO     | [monitor] control thread has ended
[2025-06-02 22:37:37] 2025-06-02 20:26:23,113 | INFO     | all workflow threads have been joined
[2025-06-02 22:37:37] 2025-06-02 20:26:23,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 22:37:37] 2025-06-02 20:26:23,113 | INFO     | traces error code: 0
[2025-06-02 22:37:37] 2025-06-02 20:26:23,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 22:37:37] 2025-06-02 20:26:23,397 [wrapper] ==== pilot stdout END ====
[2025-06-02 22:37:37] 2025-06-02 20:26:23,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 22:37:37] 2025-06-02 20:26:23,597 [wrapper] pilotpid: 29715
[2025-06-02 22:37:37] 2025-06-02 20:26:23,667 [wrapper] Pilot exit status: 0
[2025-06-02 22:37:37] 2025-06-02 20:26:23,996 [wrapper] pandaids: 6677379801
[2025-06-02 22:37:37] 2025-06-02 20:26:24,996 [wrapper] cleanup supervisor_pilot 14979 29716
[2025-06-02 22:37:37] 2025-06-02 20:26:25,103 [wrapper] Test setup, not cleaning
[2025-06-02 22:37:37] 2025-06-02 20:26:25,159 [wrapper] apfmon messages muted
[2025-06-02 22:37:37] 2025-06-02 20:26:25,266 [wrapper] ==== wrapper stdout END ====
[2025-06-02 22:37:37] 2025-06-02 20:26:25,370 [wrapper] ==== wrapper stderr END ====
[2025-06-02 22:37:37]  *** Error codes and diagnostics ***
[2025-06-02 22:37:37]     "exeErrorCode": 0,
[2025-06-02 22:37:37]     "exeErrorDiag": "",
[2025-06-02 22:37:37]     "pilotErrorCode": 0,
[2025-06-02 22:37:37]     "pilotErrorDiag": "",
[2025-06-02 22:37:37]  *** Listing of results directory ***
[2025-06-02 22:37:37] total 394168
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-02 22:37:37] -rwx------. 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 22:37:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:26 run_atlas
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:26 job.xml
[2025-06-02 22:37:37] -rw-r--r--. 2 boinc boinc 215023899 Jun  2 18:26 EVNT.45006593._000075.pool.root.1
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc      6391 Jun  2 18:26 init_data.xml
[2025-06-02 22:37:37] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:26 start_atlas.sh
[2025-06-02 22:37:37] drwxrwx--x. 2 boinc boinc        68 Jun  2 18:26 shared
[2025-06-02 22:37:37] -rw-r--r--. 2 boinc boinc    508873 Jun  2 18:26 input.tar.gz
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:26 boinc_lockfile
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc      2521 Jun  2 18:31 pandaJob.out
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc    988298 Jun  2 18:34 agis_schedconf.cvmfs.json
[2025-06-02 22:37:37] drwx------. 4 boinc boinc      4096 Jun  2 18:35 pilot3
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc 181675101 Jun  2 22:23 HITS.45006595._001859.pool.root.1
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc       531 Jun  2 22:23 boinc_task_state.xml
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc      1014 Jun  2 22:24 memory_monitor_summary.json
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc   1603667 Jun  2 22:24 agis_ddmendpoints.agis.ALL.json
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc    373798 Jun  2 22:24 log.45006595._001859.job.log.tgz.1
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc        95 Jun  2 22:25 pilot_heartbeat.json
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc      7687 Jun  2 22:26 heartbeat.json
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc      4539 Jun  2 22:26 pilotlog.txt
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc   1175803 Jun  2 22:26 log.45006595._001859.job.log.1
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc       357 Jun  2 22:26 output.list
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc       620 Jun  2 22:26 runtime_log
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc   1566720 Jun  2 22:26 result.tar.gz
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc      8659 Jun  2 22:26 runtime_log.err
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc       657 Jun  2 22:26 JrUMDmsbMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw6eKDmJvMCun.diag
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc      8192 Jun  2 22:37 boinc_mmap_file
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc        28 Jun  2 22:37 wrapper_checkpoint.txt
[2025-06-02 22:37:37] -rw-r--r--. 1 boinc boinc     20499 Jun  2 22:37 stderr.txt
[2025-06-02 22:37:37] HITS file was successfully produced:
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc 181675101 Jun  2 22:23 shared/HITS.pool.root.1
[2025-06-02 22:37:37]  *** Contents of shared directory: ***
[2025-06-02 22:37:37] total 389456
[2025-06-02 22:37:37] -rw-r--r--. 2 boinc boinc 215023899 Jun  2 18:26 ATLAS.root_0
[2025-06-02 22:37:37] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:26 start_atlas.sh
[2025-06-02 22:37:37] -rw-r--r--. 2 boinc boinc    508873 Jun  2 18:26 input.tar.gz
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc 181675101 Jun  2 22:23 HITS.pool.root.1
[2025-06-02 22:37:37] -rw-------. 1 boinc boinc   1566720 Jun  2 22:26 result.tar.gz
22:37:39 (19317): run_atlas exited; CPU time 49632.249227
22:37:39 (19317): called boinc_finish(0)

</stderr_txt>
]]>

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