Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:34:26 (15557): wrapper (7.7.26015): starting
18:34:26 (15557): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 18:34:26] Arguments: --nthreads 8
[2025-06-02 18:34:26] Threads: 8
[2025-06-02 18:34:26] Checking for CVMFS
[2025-06-02 18:34:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:34:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:34:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:34:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:34:28] 2.11.2.0 14372 30562 97844 146713 2 13 21562073 25165825 4635 130560 0 15407900 99.826 17855526 2151 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 18:34:28] CVMFS is ok
[2025-06-02 18:34:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:34:28] Checking for apptainer binary...
[2025-06-02 18:34:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:34:28] Running /usr/bin/apptainer --version
[2025-06-02 18:34:28] apptainer version 1.3.2-1.el7
[2025-06-02 18:34:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:34:44] cg-vwn440.simple-grid.lan
[2025-06-02 18:34:44] apptainer works
[2025-06-02 18:34:44] Set ATHENA_PROC_NUMBER=8
[2025-06-02 18:34:44] Set ATHENA_CORE_NUMBER=8
[2025-06-02 18:34:44] Starting ATLAS job with PandaID=6677380379
[2025-06-02 18:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 22:29:32]  *** The last 200 lines of the pilot log: ***
[2025-06-02 22:29:32] 2025-06-02 20:29:11,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 22:29:32] 2025-06-02 20:29:13,535 | INFO     | PID=24560 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-02 22:29:32] 2025-06-02 20:29:13,536 | INFO     | .. there are 9 such processes running
[2025-06-02 22:29:32] 2025-06-02 20:29:13,912 | INFO     | monitor loop #993: job 0:6677380379 is in state 'finished'
[2025-06-02 22:29:32] 2025-06-02 20:29:13,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 22:29:32] 2025-06-02 20:29:16,419 | INFO     | monitor loop #994: job 0:6677380379 is in state 'finished'
[2025-06-02 22:29:32] 2025-06-02 20:29:16,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 22:29:32] 2025-06-02 20:29:16,929 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 22:29:32] 2025-06-02 20:29:16,930 | INFO     | using path: /var/lib/boinc/slots/31/PanDA_Pilot-6677380379/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 22:29:32] 2025-06-02 20:29:16,930 | INFO     | extracted standard info from prmon json
[2025-06-02 22:29:32] 2025-06-02 20:29:16,930 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 22:29:32] 2025-06-02 20:29:16,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 22:29:32] 2025-06-02 20:29:16,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 22:29:32] 2025-06-02 20:29:16,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 22:29:32] 2025-06-02 20:29:16,936 | INFO     | fitting pss+swap vs Time
[2025-06-02 22:29:32] 2025-06-02 20:29:16,937 | INFO     | sum of square deviations: 3301699115.0
[2025-06-02 22:29:32] 2025-06-02 20:29:16,938 | INFO     | sum of deviations: 10546603082.500046
[2025-06-02 22:29:32] 2025-06-02 20:29:16,938 | INFO     | mean x: 1748889451.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,939 | INFO     | mean y: 2471799.904545455
[2025-06-02 22:29:32] 2025-06-02 20:29:16,939 | INFO     | -- intersect: -5583998147.143223
[2025-06-02 22:29:32] 2025-06-02 20:29:16,939 | INFO     | intersect: -5583998147.143223
[2025-06-02 22:29:32] 2025-06-02 20:29:16,940 | INFO     | chi2: 4.6624810431903985
[2025-06-02 22:29:32] 2025-06-02 20:29:16,940 | INFO     | sum of square deviations: 3081657780.0
[2025-06-02 22:29:32] 2025-06-02 20:29:16,942 | INFO     | sum of deviations: 24885392677.000008
[2025-06-02 22:29:32] 2025-06-02 20:29:16,942 | INFO     | mean x: 1748889299.0
[2025-06-02 22:29:32] 2025-06-02 20:29:16,942 | INFO     | mean y: 2481552.88372093
[2025-06-02 22:29:32] 2025-06-02 20:29:16,942 | INFO     | -- intersect: -14120370516.114763
[2025-06-02 22:29:32] 2025-06-02 20:29:16,943 | INFO     | intersect: -14120370516.114763
[2025-06-02 22:29:32] 2025-06-02 20:29:16,943 | INFO     | chi2: 3.9291365761182817
[2025-06-02 22:29:32] 2025-06-02 20:29:16,943 | INFO     | current chi2=3.9291365761182817 (change=15.728631607911284 %)
[2025-06-02 22:29:32] 2025-06-02 20:29:16,943 | INFO     | right removable region: 214
[2025-06-02 22:29:32] 2025-06-02 20:29:16,944 | INFO     | sum of square deviations: 3081657780.0
[2025-06-02 22:29:32] 2025-06-02 20:29:16,945 | INFO     | sum of deviations: -53497028303.99999
[2025-06-02 22:29:32] 2025-06-02 20:29:16,945 | INFO     | mean x: 1748889604.0
[2025-06-02 22:29:32] 2025-06-02 20:29:16,945 | INFO     | mean y: 2516004.2976744184
[2025-06-02 22:29:32] 2025-06-02 20:29:16,946 | INFO     | -- intersect: 30362926966.529613
[2025-06-02 22:29:32] 2025-06-02 20:29:16,946 | INFO     | intersect: 30362926966.529613
[2025-06-02 22:29:32] 2025-06-02 20:29:16,946 | INFO     | chi2: 1.0664419774754264
[2025-06-02 22:29:32] 2025-06-02 20:29:16,946 | INFO     | current chi2=1.0664419774754264 (change=77.12715681636978 %)
[2025-06-02 22:29:32] 2025-06-02 20:29:16,947 | INFO     | sum of square deviations: 2871616632.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,948 | INFO     | sum of deviations: -57679789916.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,948 | INFO     | mean x: 1748889756.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,948 | INFO     | mean y: 2518961.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,948 | INFO     | -- intersect: 35131022049.399155
[2025-06-02 22:29:32] 2025-06-02 20:29:16,948 | INFO     | intersect: 35131022049.399155
[2025-06-02 22:29:32] 2025-06-02 20:29:16,949 | INFO     | chi2: 0.9790876472141523
[2025-06-02 22:29:32] 2025-06-02 20:29:16,949 | INFO     | current chi2=0.9790876472141523 (change=8.191193905182423 %)
[2025-06-02 22:29:32] 2025-06-02 20:29:16,949 | INFO     | left removable region: 20
[2025-06-02 22:29:32] 2025-06-02 20:29:16,950 | INFO     | sum of square deviations: 2263977332.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,952 | INFO     | sum of deviations: -29769749327.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,952 | INFO     | mean x: 1748889878.5
[2025-06-02 22:29:32] 2025-06-02 20:29:16,952 | INFO     | mean y: 2520176.180412371
[2025-06-02 22:29:32] 2025-06-02 20:29:16,952 | INFO     | -- intersect: 22999222721.27841
[2025-06-02 22:29:32] 2025-06-02 20:29:16,952 | INFO     | intersect: 22999222721.27841
[2025-06-02 22:29:32] 2025-06-02 20:29:16,952 | INFO     | chi2: 0.16766524523720513
[2025-06-02 22:29:32] 2025-06-02 20:29:16,953 | INFO     | -- intersect: 22999222721.27841
[2025-06-02 22:29:32] 2025-06-02 20:29:16,953 | INFO     | current memory leak: -13.15 B/s (using 194 data points, chi2=0.17)
[2025-06-02 22:29:32] 2025-06-02 20:29:16,954 | INFO     | ..............................
[2025-06-02 22:29:32] 2025-06-02 20:29:16,954 | INFO     | . Timing measurements:
[2025-06-02 22:29:32] 2025-06-02 20:29:16,954 | INFO     | . get job = 0 s
[2025-06-02 22:29:32] 2025-06-02 20:29:16,954 | INFO     | . initial setup = 9 s
[2025-06-02 22:29:32] 2025-06-02 20:29:16,954 | INFO     | . payload setup = 150 s
[2025-06-02 22:29:32] 2025-06-02 20:29:16,954 | INFO     | . stage-in = 0 s
[2025-06-02 22:29:32] 2025-06-02 20:29:16,954 | INFO     | . payload execution = 13521 s
[2025-06-02 22:29:32] 2025-06-02 20:29:16,955 | INFO     | . stage-out = 1 s
[2025-06-02 22:29:32] 2025-06-02 20:29:16,955 | INFO     | . log creation = 0 s
[2025-06-02 22:29:32] 2025-06-02 20:29:16,955 | INFO     | ..............................
[2025-06-02 22:29:32] 2025-06-02 20:29:17,403 | INFO     | 
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | job summary report
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | --------------------------------------------------
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | PanDA job id: 6677380379
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | task id: 45006595
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | errors: (none)
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | pilot state: finished 
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | transexitcode: 0
[2025-06-02 22:29:32] 2025-06-02 20:29:17,404 | INFO     | exeerrorcode: 0
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | exeerrordiag: 
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | exitcode: 0
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | exitmsg: OK
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | cpuconsumptiontime: 49379 s
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | nevents: 400
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | neventsw: 0
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | pid: 31128
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | pgrp: 31128
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | corecount: 8
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | event service: False
[2025-06-02 22:29:32] 2025-06-02 20:29:17,405 | INFO     | sizes: {0: 2404348, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 56: 2405501, 66: 2405529, 77: 2405557, 88: 2405613, 93: 2406127, 98
[2025-06-02 22:29:32] 2025-06-02 20:29:17,406 | INFO     | --------------------------------------------------
[2025-06-02 22:29:32] 2025-06-02 20:29:17,406 | INFO     | 
[2025-06-02 22:29:32] 2025-06-02 20:29:17,406 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-06-02 22:29:32] 2025-06-02 20:29:17,438 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 22:29:32] 2025-06-02 20:29:17,441 | INFO     | job 6677380379 has completed (purged errors)
[2025-06-02 22:29:32] 2025-06-02 20:29:17,441 | INFO     | overall cleanup function is called
[2025-06-02 22:29:32] 2025-06-02 20:29:18,450 | INFO     | --- collectZombieJob: --- 10, [31128]
[2025-06-02 22:29:32] 2025-06-02 20:29:18,451 | INFO     | zombie collector waiting for pid 31128
[2025-06-02 22:29:32] 2025-06-02 20:29:18,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 22:29:32] 2025-06-02 20:29:18,451 | INFO     | collected zombie processes
[2025-06-02 22:29:32] 2025-06-02 20:29:18,451 | INFO     | will attempt to kill all subprocesses of pid=31128
[2025-06-02 22:29:32] 2025-06-02 20:29:18,554 | INFO     | process IDs to be killed: [31128] (in reverse order)
[2025-06-02 22:29:32] 2025-06-02 20:29:18,677 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 22:29:32] 2025-06-02 20:29:18,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 22:29:32] 2025-06-02 20:29:18,681 | INFO     | did not find any defunct processes belonging to 31128
[2025-06-02 22:29:32] 2025-06-02 20:29:18,685 | INFO     | did not find any defunct processes belonging to 31128
[2025-06-02 22:29:32] 2025-06-02 20:29:18,685 | INFO     | ready for new job
[2025-06-02 22:29:32] 2025-06-02 20:29:18,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 22:29:32] 2025-06-02 20:29:18,688 | INFO     | **************************************
[2025-06-02 22:29:32] 2025-06-02 20:29:18,688 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 22:29:32] 2025-06-02 20:29:18,688 | INFO     | **************************************
[2025-06-02 22:29:32] 2025-06-02 20:29:18,688 | INFO     | 
[2025-06-02 22:29:32] 2025-06-02 20:29:18,689 | INFO     | pilot is running in a VM
[2025-06-02 22:29:32] 2025-06-02 20:29:18,689 | INFO     | architecture information:
[2025-06-02 22:29:32] 2025-06-02 20:29:18,690 | INFO     | executing command: cat /etc/os-release
[2025-06-02 22:29:32] 2025-06-02 20:29:18,714 | INFO     | cat /etc/os-release:
[2025-06-02 22:29:32] NAME="CentOS Linux"
[2025-06-02 22:29:32] VERSION="7 (Core)"
[2025-06-02 22:29:32] ID="centos"
[2025-06-02 22:29:32] ID_LIKE="rhel fedora"
[2025-06-02 22:29:32] VERSION_ID="7"
[2025-06-02 22:29:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 22:29:32] ANSI_COLOR="0;31"
[2025-06-02 22:29:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 22:29:32] HOME_URL="https://www.centos.org/"
[2025-06-02 22:29:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 22:29:32] 
[2025-06-02 22:29:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 22:29:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 22:29:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 22:29:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 22:29:32] 
[2025-06-02 22:29:32] 2025-06-02 20:29:18,715 | INFO     | **************************************
[2025-06-02 22:29:32] 2025-06-02 20:29:19,218 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-06-02 22:29:32] 2025-06-02 20:29:19,323 | INFO     | sufficient remaining disk space (496744005632 B)
[2025-06-02 22:29:32] 2025-06-02 20:29:19,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 22:29:32] 2025-06-02 20:29:19,324 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 22:29:32] 2025-06-02 20:29:19,324 | INFO     | update_server=False
[2025-06-02 22:29:32] 2025-06-02 20:29:19,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 22:29:32] 2025-06-02 20:29:19,569 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 22:29:32] 2025-06-02 20:29:19,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 22:29:32] 2025-06-02 20:29:19,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 22:29:32] 2025-06-02 20:29:19,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:29:32] 2025-06-02 20:29:19,931 | INFO     | aborting loop
[2025-06-02 22:29:32] 2025-06-02 20:29:20,113 | INFO     | all data control threads have been joined
[2025-06-02 22:29:32] 2025-06-02 20:29:20,150 | INFO     | all job control threads have been joined
[2025-06-02 22:29:32] 2025-06-02 20:29:20,328 | INFO     | [job] retrieve thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:20,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:20,405 | INFO     | all payload control threads have been joined
[2025-06-02 22:29:32] 2025-06-02 20:29:20,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 22:29:32] 2025-06-02 20:29:20,887 | INFO     | [job] validate thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:20,936 | INFO     | [job] job monitor thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,006 | INFO     | [payload] failed_post thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,119 | INFO     | [data] control thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,150 | INFO     | [payload] validate_post thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,155 | INFO     | [job] control thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,173 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,253 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,329 | INFO     | [data] copytool_in thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,411 | INFO     | [payload] control thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:21,607 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:22,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 22:29:32] 2025-06-02 20:29:22,442 | INFO     | [data] copytool_out thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:22,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 22:29:32] 2025-06-02 20:29:23,097 | INFO     | [job] queue monitor thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:26,590 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 22:29:32] 2025-06-02 20:29:27,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553431369536)>', '<ExcThread(monitor, started 140552846690048)>']
[2025-06-02 22:29:32] 2025-06-02 20:29:27,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 22:29:32] 2025-06-02 20:29:27,614 | INFO     | [monitor] control thread has ended
[2025-06-02 22:29:32] 2025-06-02 20:29:32,098 | INFO     | all workflow threads have been joined
[2025-06-02 22:29:32] 2025-06-02 20:29:32,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 22:29:32] 2025-06-02 20:29:32,099 | INFO     | traces error code: 0
[2025-06-02 22:29:32] 2025-06-02 20:29:32,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 22:29:32] 2025-06-02 20:29:32,331 [wrapper] ==== pilot stdout END ====
[2025-06-02 22:29:32] 2025-06-02 20:29:32,396 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 22:29:32] 2025-06-02 20:29:32,427 [wrapper] pilotpid: 24560
[2025-06-02 22:29:32] 2025-06-02 20:29:32,447 [wrapper] Pilot exit status: 0
[2025-06-02 22:29:32] 2025-06-02 20:29:32,477 [wrapper] pandaids: 6677380379
[2025-06-02 22:29:32] 2025-06-02 20:29:32,522 [wrapper] cleanup supervisor_pilot 26366 24561
[2025-06-02 22:29:32] 2025-06-02 20:29:32,529 [wrapper] Test setup, not cleaning
[2025-06-02 22:29:32] 2025-06-02 20:29:32,542 [wrapper] apfmon messages muted
[2025-06-02 22:29:32] 2025-06-02 20:29:32,549 [wrapper] ==== wrapper stdout END ====
[2025-06-02 22:29:32] 2025-06-02 20:29:32,558 [wrapper] ==== wrapper stderr END ====
[2025-06-02 22:29:32]  *** Error codes and diagnostics ***
[2025-06-02 22:29:32]     "exeErrorCode": 0,
[2025-06-02 22:29:32]     "exeErrorDiag": "",
[2025-06-02 22:29:32]     "pilotErrorCode": 0,
[2025-06-02 22:29:32]     "pilotErrorDiag": "",
[2025-06-02 22:29:32]  *** Listing of results directory ***
[2025-06-02 22:29:32] total 391236
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-02 22:29:32] -rwx------. 1 boinc boinc     37140 Jun  2 17:51 runpilot2-wrapper.sh
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:53 queuedata.json
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 22:29:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:34 run_atlas
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:34 job.xml
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc      6393 Jun  2 18:34 init_data.xml
[2025-06-02 22:29:32] -rw-r--r--. 2 boinc boinc 214622947 Jun  2 18:34 EVNT.45006593._000085.pool.root.1
[2025-06-02 22:29:32] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:34 start_atlas.sh
[2025-06-02 22:29:32] drwxrwx--x. 2 boinc boinc        68 Jun  2 18:34 shared
[2025-06-02 22:29:32] -rw-r--r--. 2 boinc boinc    508878 Jun  2 18:34 input.tar.gz
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:34 boinc_lockfile
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc      2521 Jun  2 18:34 pandaJob.out
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc    988298 Jun  2 18:37 agis_schedconf.cvmfs.json
[2025-06-02 22:29:32] drwx------. 4 boinc boinc      4096 Jun  2 18:38 pilot3
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc 179032958 Jun  2 22:28 HITS.45006595._002120.pool.root.1
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc       531 Jun  2 22:28 boinc_task_state.xml
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc      1017 Jun  2 22:29 memory_monitor_summary.json
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc   1603667 Jun  2 22:29 agis_ddmendpoints.agis.ALL.json
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc    389180 Jun  2 22:29 log.45006595._002120.job.log.tgz.1
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc      7688 Jun  2 22:29 heartbeat.json
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc        95 Jun  2 22:29 pilot_heartbeat.json
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc      8192 Jun  2 22:29 boinc_mmap_file
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc        28 Jun  2 22:29 wrapper_checkpoint.txt
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc      4417 Jun  2 22:29 pilotlog.txt
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc   1182668 Jun  2 22:29 log.45006595._002120.job.log.1
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc       357 Jun  2 22:29 output.list
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc       620 Jun  2 22:29 runtime_log
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc   1587200 Jun  2 22:29 result.tar.gz
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc      8673 Jun  2 22:29 runtime_log.err
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc       657 Jun  2 22:29 BIdLDm2cMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYfVKDm7OUv1n.diag
[2025-06-02 22:29:32] -rw-r--r--. 1 boinc boinc     20852 Jun  2 22:29 stderr.txt
[2025-06-02 22:29:32] HITS file was successfully produced:
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc 179032958 Jun  2 22:28 shared/HITS.pool.root.1
[2025-06-02 22:29:32]  *** Contents of shared directory: ***
[2025-06-02 22:29:32] total 386504
[2025-06-02 22:29:32] -rw-r--r--. 2 boinc boinc 214622947 Jun  2 18:34 ATLAS.root_0
[2025-06-02 22:29:32] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:34 start_atlas.sh
[2025-06-02 22:29:32] -rw-r--r--. 2 boinc boinc    508878 Jun  2 18:34 input.tar.gz
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc 179032958 Jun  2 22:28 HITS.pool.root.1
[2025-06-02 22:29:32] -rw-------. 1 boinc boinc   1587200 Jun  2 22:29 result.tar.gz
22:29:34 (15557): run_atlas exited; CPU time 49546.002220
22:29:34 (15557): called boinc_finish(0)

</stderr_txt>
]]>

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