Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:37:42 (27403): wrapper (7.7.26015): starting
22:37:42 (27403): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 22:37:42] Arguments: --nthreads 8
[2025-06-02 22:37:42] Threads: 8
[2025-06-02 22:37:42] Checking for CVMFS
[2025-06-02 22:37:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 22:37:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 22:37:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 22:37:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 22:37:45] 2.11.2.0 11201 30830 90144 146718 0 59 14040212 25165825 4632 130560 0 15747901 99.793 18769701 2006 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 22:37:45] CVMFS is ok
[2025-06-02 22:37:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 22:37:45] Checking for apptainer binary...
[2025-06-02 22:37:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 22:37:45] Running /usr/bin/apptainer --version
[2025-06-02 22:37:45] apptainer version 1.3.2-1.el7
[2025-06-02 22:37:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:46:20] cg-vwn265.simple-grid.lan
[2025-06-02 22:46:20] apptainer works
[2025-06-02 22:46:20] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:46:20] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:46:20] Starting ATLAS job with PandaID=6677378585
[2025-06-02 22:46:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:08:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:08:13] 2025-06-03 00:36:33,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:08:13] 2025-06-03 00:36:33,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:08:13] 2025-06-03 00:36:33,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:08:13] 2025-06-03 00:36:33,670 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:08:13] 2025-06-03 00:36:33,671 | INFO     | sum of square deviations: 3485088600.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,673 | INFO     | sum of deviations: -66920142964.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,673 | INFO     | mean x: 1748904071.5
[2025-06-03 03:08:13] 2025-06-03 00:36:33,673 | INFO     | mean y: 2590905.1696428573
[2025-06-03 03:08:13] 2025-06-03 00:36:33,673 | INFO     | -- intersect: 33584781755.382652
[2025-06-03 03:08:13] 2025-06-03 00:36:33,673 | INFO     | intersect: 33584781755.382652
[2025-06-03 03:08:13] 2025-06-03 00:36:33,682 | INFO     | chi2: 2.645760340154642
[2025-06-03 03:08:13] 2025-06-03 00:36:33,683 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,684 | INFO     | sum of deviations: -48520576751.00001
[2025-06-03 03:08:13] 2025-06-03 00:36:33,684 | INFO     | mean x: 1748903919.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,685 | INFO     | mean y: 2603022.1735159815
[2025-06-03 03:08:13] 2025-06-03 00:36:33,685 | INFO     | -- intersect: 26057549913.09264
[2025-06-03 03:08:13] 2025-06-03 00:36:33,685 | INFO     | intersect: 26057549913.09264
[2025-06-03 03:08:13] 2025-06-03 00:36:33,685 | INFO     | chi2: 1.8782490776826661
[2025-06-03 03:08:13] 2025-06-03 00:36:33,685 | INFO     | current chi2=1.8782490776826661 (change=29.009099986248778 %)
[2025-06-03 03:08:13] 2025-06-03 00:36:33,686 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 03:08:13] 2025-06-03 00:36:33,687 | INFO     | sum of deviations: -45038327670.49999
[2025-06-03 03:08:13] 2025-06-03 00:36:33,687 | INFO     | mean x: 1748903766.5
[2025-06-03 03:08:13] 2025-06-03 00:36:33,687 | INFO     | mean y: 2605458.836448598
[2025-06-03 03:08:13] 2025-06-03 00:36:33,688 | INFO     | -- intersect: 25922779222.525402
[2025-06-03 03:08:13] 2025-06-03 00:36:33,688 | INFO     | intersect: 25922779222.525402
[2025-06-03 03:08:13] 2025-06-03 00:36:33,688 | INFO     | chi2: 1.8786148863042162
[2025-06-03 03:08:13] 2025-06-03 00:36:33,688 | INFO     | current chi2=1.8786148863042162 (change=-0.019476044252950582 %)
[2025-06-03 03:08:13] 2025-06-03 00:36:33,688 | INFO     | right removable region: 213
[2025-06-03 03:08:13] 2025-06-03 00:36:33,689 | INFO     | sum of square deviations: 3256879670.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,690 | INFO     | sum of deviations: -104845407308.9998
[2025-06-03 03:08:13] 2025-06-03 00:36:33,690 | INFO     | mean x: 1748904224.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,691 | INFO     | mean y: 2616021.4429223742
[2025-06-03 03:08:13] 2025-06-03 00:36:33,691 | INFO     | -- intersect: 56303306955.3853
[2025-06-03 03:08:13] 2025-06-03 00:36:33,691 | INFO     | intersect: 56303306955.3853
[2025-06-03 03:08:13] 2025-06-03 00:36:33,691 | INFO     | chi2: 1.042533769413878
[2025-06-03 03:08:13] 2025-06-03 00:36:33,691 | INFO     | current chi2=1.042533769413878 (change=60.5960617977612 %)
[2025-06-03 03:08:13] 2025-06-03 00:36:33,692 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 03:08:13] 2025-06-03 00:36:33,693 | INFO     | sum of deviations: -107822317627.49997
[2025-06-03 03:08:13] 2025-06-03 00:36:33,693 | INFO     | mean x: 1748904376.5
[2025-06-03 03:08:13] 2025-06-03 00:36:33,693 | INFO     | mean y: 2618068.070093458
[2025-06-03 03:08:13] 2025-06-03 00:36:33,693 | INFO     | -- intersect: 62055858671.13423
[2025-06-03 03:08:13] 2025-06-03 00:36:33,694 | INFO     | intersect: 62055858671.13423
[2025-06-03 03:08:13] 2025-06-03 00:36:33,694 | INFO     | chi2: 0.9760452989921694
[2025-06-03 03:08:13] 2025-06-03 00:36:33,694 | INFO     | current chi2=0.9760452989921694 (change=6.377584340417972 %)
[2025-06-03 03:08:13] 2025-06-03 00:36:33,694 | INFO     | left removable region: 20
[2025-06-03 03:08:13] 2025-06-03 00:36:33,694 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,696 | INFO     | sum of deviations: -78275103131.99998
[2025-06-03 03:08:13] 2025-06-03 00:36:33,696 | INFO     | mean x: 1748904346.0
[2025-06-03 03:08:13] 2025-06-03 00:36:33,696 | INFO     | mean y: 2630316.89119171
[2025-06-03 03:08:13] 2025-06-03 00:36:33,696 | INFO     | -- intersect: 61414315349.4984
[2025-06-03 03:08:13] 2025-06-03 00:36:33,696 | INFO     | intersect: 61414315349.4984
[2025-06-03 03:08:13] 2025-06-03 00:36:33,696 | INFO     | chi2: 0.1658608983342505
[2025-06-03 03:08:13] 2025-06-03 00:36:33,697 | INFO     | -- intersect: 61414315349.4984
[2025-06-03 03:08:13] 2025-06-03 00:36:33,697 | INFO     | current memory leak: -35.11 B/s (using 193 data points, chi2=0.17)
[2025-06-03 03:08:13] 2025-06-03 00:36:33,702 | INFO     | ..............................
[2025-06-03 03:08:13] 2025-06-03 00:36:33,702 | INFO     | . Timing measurements:
[2025-06-03 03:08:13] 2025-06-03 00:36:33,702 | INFO     | . get job = 0 s
[2025-06-03 03:08:13] 2025-06-03 00:36:33,702 | INFO     | . initial setup = 2 s
[2025-06-03 03:08:13] 2025-06-03 00:36:33,703 | INFO     | . payload setup = 13 s
[2025-06-03 03:08:13] 2025-06-03 00:36:33,703 | INFO     | . stage-in = 0 s
[2025-06-03 03:08:13] 2025-06-03 00:36:33,703 | INFO     | . payload execution = 13641 s
[2025-06-03 03:08:13] 2025-06-03 00:36:33,703 | INFO     | . stage-out = 5 s
[2025-06-03 03:08:13] 2025-06-03 00:36:33,703 | INFO     | . log creation = 1 s
[2025-06-03 03:08:13] 2025-06-03 00:36:33,703 | INFO     | ..............................
[2025-06-03 03:08:13] 2025-06-03 00:36:34,330 | INFO     | 
[2025-06-03 03:08:13] 2025-06-03 00:36:34,330 | INFO     | job summary report
[2025-06-03 03:08:13] 2025-06-03 00:36:34,330 | INFO     | --------------------------------------------------
[2025-06-03 03:08:13] 2025-06-03 00:36:34,330 | INFO     | PanDA job id: 6677378585
[2025-06-03 03:08:13] 2025-06-03 00:36:34,330 | INFO     | task id: 45006595
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | errors: (none)
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | pilot state: finished 
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | transexitcode: 0
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | exeerrorcode: 0
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | exeerrordiag: 
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | exitcode: 0
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | exitmsg: OK
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | cpuconsumptiontime: 50973 s
[2025-06-03 03:08:13] 2025-06-03 00:36:34,331 | INFO     | nevents: 400
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | neventsw: 0
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | pid: 13412
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | pgrp: 13412
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | corecount: 8
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | event service: False
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | sizes: {0: 2405176, 1: 2405204, 12: 2405204, 14: 2405438, 23: 2405466, 13659: 2435245, 13665: 2444186, 13666: 2444242, 13757: 2444412}
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | --------------------------------------------------
[2025-06-03 03:08:13] 2025-06-03 00:36:34,332 | INFO     | 
[2025-06-03 03:08:13] 2025-06-03 00:36:34,333 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 03:08:13] 2025-06-03 00:36:34,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:08:13] 2025-06-03 00:36:34,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:08:13] 2025-06-03 00:36:34,726 | INFO     | job 6677378585 has completed (purged errors)
[2025-06-03 03:08:13] 2025-06-03 00:36:34,726 | INFO     | overall cleanup function is called
[2025-06-03 03:08:13] 2025-06-03 00:36:35,735 | INFO     | --- collectZombieJob: --- 10, [13412]
[2025-06-03 03:08:13] 2025-06-03 00:36:35,735 | INFO     | zombie collector waiting for pid 13412
[2025-06-03 03:08:13] 2025-06-03 00:36:35,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:08:13] 2025-06-03 00:36:35,735 | INFO     | collected zombie processes
[2025-06-03 03:08:13] 2025-06-03 00:36:35,736 | INFO     | will attempt to kill all subprocesses of pid=13412
[2025-06-03 03:08:13] 2025-06-03 00:36:35,855 | INFO     | process IDs to be killed: [13412] (in reverse order)
[2025-06-03 03:08:13] 2025-06-03 00:36:35,991 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:08:13] 2025-06-03 00:36:35,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:08:13] 2025-06-03 00:36:35,995 | INFO     | did not find any defunct processes belonging to 13412
[2025-06-03 03:08:13] 2025-06-03 00:36:35,998 | INFO     | did not find any defunct processes belonging to 13412
[2025-06-03 03:08:13] 2025-06-03 00:36:35,998 | INFO     | ready for new job
[2025-06-03 03:08:13] 2025-06-03 00:36:35,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:08:13] 2025-06-03 00:36:36,000 | INFO     | **************************************
[2025-06-03 03:08:13] 2025-06-03 00:36:36,000 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:08:13] 2025-06-03 00:36:36,001 | INFO     | **************************************
[2025-06-03 03:08:13] 2025-06-03 00:36:36,001 | INFO     | 
[2025-06-03 03:08:13] 2025-06-03 00:36:36,001 | INFO     | pilot is running in a VM
[2025-06-03 03:08:13] 2025-06-03 00:36:36,001 | INFO     | architecture information:
[2025-06-03 03:08:13] 2025-06-03 00:36:36,002 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:08:13] 2025-06-03 00:36:36,026 | INFO     | cat /etc/os-release:
[2025-06-03 03:08:13] NAME="CentOS Linux"
[2025-06-03 03:08:13] VERSION="7 (Core)"
[2025-06-03 03:08:13] ID="centos"
[2025-06-03 03:08:13] ID_LIKE="rhel fedora"
[2025-06-03 03:08:13] VERSION_ID="7"
[2025-06-03 03:08:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:08:13] ANSI_COLOR="0;31"
[2025-06-03 03:08:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:08:13] HOME_URL="https://www.centos.org/"
[2025-06-03 03:08:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:08:13] 
[2025-06-03 03:08:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:08:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:08:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:08:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:08:13] 
[2025-06-03 03:08:13] 2025-06-03 00:36:36,026 | INFO     | **************************************
[2025-06-03 03:08:13] 2025-06-03 00:36:36,529 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 03:08:13] 2025-06-03 00:36:36,700 | INFO     | sufficient remaining disk space (496917020672 B)
[2025-06-03 03:08:13] 2025-06-03 00:36:36,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:08:13] 2025-06-03 00:36:36,701 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:08:13] 2025-06-03 00:36:36,701 | INFO     | update_server=False
[2025-06-03 03:08:13] 2025-06-03 00:36:36,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:08:13] 2025-06-03 00:36:36,702 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 03:08:13] 2025-06-03 00:36:36,702 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:08:13] 2025-06-03 00:36:36,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:08:13] 2025-06-03 00:36:36,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:08:13] 2025-06-03 00:36:36,938 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 03:08:13] 2025-06-03 00:36:36,938 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 03:08:13] 2025-06-03 00:36:36,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:08:13] 2025-06-03 00:36:36,938 | INFO     | will abort loop
[2025-06-03 03:08:13] 2025-06-03 00:36:37,183 | INFO     | all data control threads have been joined
[2025-06-03 03:08:13] 2025-06-03 00:36:37,275 | INFO     | all job control threads have been joined
[2025-06-03 03:08:13] 2025-06-03 00:36:37,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:08:13] 2025-06-03 00:36:37,376 | INFO     | all payload control threads have been joined
[2025-06-03 03:08:13] 2025-06-03 00:36:37,707 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:37,896 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:37,945 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,189 | INFO     | [data] control thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,280 | INFO     | [job] control thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,339 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,382 | INFO     | [payload] control thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,390 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,621 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:08:13] 2025-06-03 00:36:38,783 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,804 | INFO     | [job] validate thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,804 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:38,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:08:13] 2025-06-03 00:36:39,075 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:39,315 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:39,895 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:42,781 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:08:13] 2025-06-03 00:36:43,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662142617408)>', '<ExcThread(monitor, started 139661330609920)>']
[2025-06-03 03:08:13] 2025-06-03 00:36:44,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:08:13] 2025-06-03 00:36:44,751 | INFO     | [monitor] control thread has ended
[2025-06-03 03:08:13] 2025-06-03 00:36:48,928 | INFO     | all workflow threads have been joined
[2025-06-03 03:08:13] 2025-06-03 00:36:48,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:08:13] 2025-06-03 00:36:48,928 | INFO     | traces error code: 0
[2025-06-03 03:08:13] 2025-06-03 00:36:48,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:08:13] 2025-06-03 00:36:49,192 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:08:13] 2025-06-03 00:36:49,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:08:13] 2025-06-03 00:36:49,225 [wrapper] pilotpid: 4771
[2025-06-03 03:08:13] 2025-06-03 00:36:49,242 [wrapper] Pilot exit status: 0
[2025-06-03 03:08:13] 2025-06-03 00:36:49,779 [wrapper] pandaids: 6677378585
[2025-06-03 03:08:13] 2025-06-03 00:36:50,585 [wrapper] cleanup supervisor_pilot 10085 4772
[2025-06-03 03:08:13] 2025-06-03 00:36:50,664 [wrapper] Test setup, not cleaning
[2025-06-03 03:08:13] 2025-06-03 00:36:50,720 [wrapper] apfmon messages muted
[2025-06-03 03:08:13] 2025-06-03 00:36:50,809 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:08:13] 2025-06-03 00:36:50,916 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:08:13]  *** Error codes and diagnostics ***
[2025-06-03 03:08:13]     "exeErrorCode": 0,
[2025-06-03 03:08:13]     "exeErrorDiag": "",
[2025-06-03 03:08:13]     "pilotErrorCode": 0,
[2025-06-03 03:08:13]     "pilotErrorDiag": "",
[2025-06-03 03:08:13]  *** Listing of results directory ***
[2025-06-03 03:08:13] total 399168
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 03:08:13] -rwx------. 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc       100 Jun  2 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:08:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 22:37 run_atlas
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc       105 Jun  2 22:37 job.xml
[2025-06-03 03:08:13] -rw-r--r--. 2 boinc boinc 217391595 Jun  2 22:37 EVNT.45006593._000052.pool.root.1
[2025-06-03 03:08:13] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:37 start_atlas.sh
[2025-06-03 03:08:13] drwxrwx--x. 2 boinc boinc        68 Jun  2 22:37 shared
[2025-06-03 03:08:13] -rw-r--r--. 2 boinc boinc    508876 Jun  2 22:37 input.tar.gz
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc      6391 Jun  2 22:37 init_data.xml
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc         0 Jun  2 22:37 boinc_lockfile
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc      2521 Jun  2 22:46 pandaJob.out
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc    987975 Jun  2 22:46 agis_schedconf.cvmfs.json
[2025-06-03 03:08:13] drwx------. 4 boinc boinc      4096 Jun  2 22:46 pilot3
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc 184372327 Jun  3 02:33 HITS.45006595._001292.pool.root.1
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:34 boinc_task_state.xml
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc      1017 Jun  3 02:34 memory_monitor_summary.json
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc   1603667 Jun  3 02:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc    385871 Jun  3 02:35 log.45006595._001292.job.log.tgz.1
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc        95 Jun  3 02:36 pilot_heartbeat.json
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc      7687 Jun  3 02:36 heartbeat.json
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc      4725 Jun  3 02:36 pilotlog.txt
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc   1192622 Jun  3 02:36 log.45006595._001292.job.log.1
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc       357 Jun  3 02:36 output.list
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:36 runtime_log
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc   1597440 Jun  3 02:36 result.tar.gz
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc      8659 Jun  3 02:36 runtime_log.err
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc       656 Jun  3 02:36 QQNNDmmbMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT5eKDmpoYSRm.diag
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:08 boinc_mmap_file
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:08 wrapper_checkpoint.txt
[2025-06-03 03:08:13] -rw-r--r--. 1 boinc boinc     20500 Jun  3 03:08 stderr.txt
[2025-06-03 03:08:13] HITS file was successfully produced:
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc 184372327 Jun  3 02:33 shared/HITS.pool.root.1
[2025-06-03 03:08:13]  *** Contents of shared directory: ***
[2025-06-03 03:08:13] total 394428
[2025-06-03 03:08:13] -rw-r--r--. 2 boinc boinc 217391595 Jun  2 22:37 ATLAS.root_0
[2025-06-03 03:08:13] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:37 start_atlas.sh
[2025-06-03 03:08:13] -rw-r--r--. 2 boinc boinc    508876 Jun  2 22:37 input.tar.gz
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc 184372327 Jun  3 02:33 HITS.pool.root.1
[2025-06-03 03:08:13] -rw-------. 1 boinc boinc   1597440 Jun  3 02:36 result.tar.gz
03:08:15 (27403): run_atlas exited; CPU time 51148.469837
03:08:15 (27403): called boinc_finish(0)

</stderr_txt>
]]>

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