Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:16:51 (2122): wrapper (7.7.26015): starting
23:16:51 (2122): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 23:16:51] Arguments: --nthreads 8
[2025-06-02 23:16:51] Threads: 8
[2025-06-02 23:16:51] Checking for CVMFS
[2025-06-02 23:16:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:16:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:16:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:16:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:16:52] 2.11.2.0 26867 30856 92208 146718 0 114 24958947 25165825 4353 130560 0 15607164 99.829 17169428 1933 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 23:16:52] CVMFS is ok
[2025-06-02 23:16:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:16:52] Checking for apptainer binary...
[2025-06-02 23:16:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:16:52] Running /usr/bin/apptainer --version
[2025-06-02 23:16:52] apptainer version 1.3.2-1.el7
[2025-06-02 23:16:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:16:54] cg-vwn435.simple-grid.lan
[2025-06-02 23:16:54] apptainer works
[2025-06-02 23:16:54] Set ATHENA_PROC_NUMBER=8
[2025-06-02 23:16:54] Set ATHENA_CORE_NUMBER=8
[2025-06-02 23:16:54] Starting ATLAS job with PandaID=6677379826
[2025-06-02 23:16:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:20:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:20:31] 2025-06-03 00:58:51,549 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677379826/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,550 | INFO     | extracted standard info from prmon json
[2025-06-03 03:20:31] 2025-06-03 00:58:51,550 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:20:31] 2025-06-03 00:58:51,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:20:31] 2025-06-03 00:58:51,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:20:31] 2025-06-03 00:58:51,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:20:31] 2025-06-03 00:58:51,555 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:20:31] 2025-06-03 00:58:51,556 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,558 | INFO     | sum of deviations: -48222105611.5
[2025-06-03 03:20:31] 2025-06-03 00:58:51,558 | INFO     | mean x: 1748905667.5
[2025-06-03 03:20:31] 2025-06-03 00:58:51,558 | INFO     | mean y: 2555808.4583333335
[2025-06-03 03:20:31] 2025-06-03 00:58:51,558 | INFO     | -- intersect: 26991269497.014687
[2025-06-03 03:20:31] 2025-06-03 00:58:51,558 | INFO     | intersect: 26991269497.014687
[2025-06-03 03:20:31] 2025-06-03 00:58:51,559 | INFO     | chi2: 2.950464240593902
[2025-06-03 03:20:31] 2025-06-03 00:58:51,559 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,561 | INFO     | sum of deviations: -31806143895.000004
[2025-06-03 03:20:31] 2025-06-03 00:58:51,561 | INFO     | mean x: 1748905515.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,561 | INFO     | mean y: 2567424.0236966824
[2025-06-03 03:20:31] 2025-06-03 00:58:51,561 | INFO     | -- intersect: 19099399610.20952
[2025-06-03 03:20:31] 2025-06-03 00:58:51,562 | INFO     | intersect: 19099399610.20952
[2025-06-03 03:20:31] 2025-06-03 00:58:51,562 | INFO     | chi2: 2.1901138310671833
[2025-06-03 03:20:31] 2025-06-03 00:58:51,562 | INFO     | current chi2=2.1901138310671833 (change=25.77053465232532 %)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,562 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 03:20:31] 2025-06-03 00:58:51,564 | INFO     | sum of deviations: -29845634364.500004
[2025-06-03 03:20:31] 2025-06-03 00:58:51,564 | INFO     | mean x: 1748905362.5
[2025-06-03 03:20:31] 2025-06-03 00:58:51,564 | INFO     | mean y: 2568902.859223301
[2025-06-03 03:20:31] 2025-06-03 00:58:51,564 | INFO     | -- intersect: 19259065299.90191
[2025-06-03 03:20:31] 2025-06-03 00:58:51,565 | INFO     | intersect: 19259065299.90191
[2025-06-03 03:20:31] 2025-06-03 00:58:51,565 | INFO     | chi2: 2.1894860939176546
[2025-06-03 03:20:31] 2025-06-03 00:58:51,565 | INFO     | current chi2=2.1894860939176546 (change=0.02866230698259209 %)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,565 | INFO     | right removable region: 205
[2025-06-03 03:20:31] 2025-06-03 00:58:51,566 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,567 | INFO     | sum of deviations: -91302212258.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,567 | INFO     | mean x: 1748905820.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,568 | INFO     | mean y: 2586557.962085308
[2025-06-03 03:20:31] 2025-06-03 00:58:51,568 | INFO     | -- intersect: 54821659739.1164
[2025-06-03 03:20:31] 2025-06-03 00:58:51,568 | INFO     | intersect: 54821659739.1164
[2025-06-03 03:20:31] 2025-06-03 00:58:51,568 | INFO     | chi2: 1.0126691856495635
[2025-06-03 03:20:31] 2025-06-03 00:58:51,568 | INFO     | current chi2=1.0126691856495635 (change=65.67763229539354 %)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,569 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 03:20:31] 2025-06-03 00:58:51,570 | INFO     | sum of deviations: -91411839780.5
[2025-06-03 03:20:31] 2025-06-03 00:58:51,570 | INFO     | mean x: 1748905972.5
[2025-06-03 03:20:31] 2025-06-03 00:58:51,570 | INFO     | mean y: 2586600.5970873786
[2025-06-03 03:20:31] 2025-06-03 00:58:51,571 | INFO     | -- intersect: 58981811362.47671
[2025-06-03 03:20:31] 2025-06-03 00:58:51,571 | INFO     | intersect: 58981811362.47671
[2025-06-03 03:20:31] 2025-06-03 00:58:51,571 | INFO     | chi2: 0.9782903879415217
[2025-06-03 03:20:31] 2025-06-03 00:58:51,571 | INFO     | current chi2=0.9782903879415217 (change=3.3948695383665726 %)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,571 | INFO     | left removable region: 20
[2025-06-03 03:20:31] 2025-06-03 00:58:51,572 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,573 | INFO     | sum of deviations: -63169606763.99999
[2025-06-03 03:20:31] 2025-06-03 00:58:51,573 | INFO     | mean x: 1748905942.0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,573 | INFO     | mean y: 2594969.108108108
[2025-06-03 03:20:31] 2025-06-03 00:58:51,573 | INFO     | -- intersect: 56274770680.65905
[2025-06-03 03:20:31] 2025-06-03 00:58:51,573 | INFO     | intersect: 56274770680.65905
[2025-06-03 03:20:31] 2025-06-03 00:58:51,574 | INFO     | chi2: 0.17595977823826284
[2025-06-03 03:20:31] 2025-06-03 00:58:51,574 | INFO     | -- intersect: 56274770680.65905
[2025-06-03 03:20:31] 2025-06-03 00:58:51,574 | INFO     | current memory leak: -32.18 B/s (using 185 data points, chi2=0.18)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | ..............................
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | . Timing measurements:
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | . get job = 0 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | . initial setup = 2 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | . payload setup = 15 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | . stage-in = 0 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | . payload execution = 13153 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,575 | INFO     | . stage-out = 4 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,576 | INFO     | . log creation = 1 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,576 | INFO     | ..............................
[2025-06-03 03:20:31] 2025-06-03 00:58:51,701 | INFO     | 
[2025-06-03 03:20:31] 2025-06-03 00:58:51,701 | INFO     | job summary report
[2025-06-03 03:20:31] 2025-06-03 00:58:51,701 | INFO     | --------------------------------------------------
[2025-06-03 03:20:31] 2025-06-03 00:58:51,701 | INFO     | PanDA job id: 6677379826
[2025-06-03 03:20:31] 2025-06-03 00:58:51,701 | INFO     | task id: 45006595
[2025-06-03 03:20:31] 2025-06-03 00:58:51,701 | INFO     | errors: (none)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | pilot state: finished 
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | transexitcode: 0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | exeerrorcode: 0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | exeerrordiag: 
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | exitcode: 0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | exitmsg: OK
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | cpuconsumptiontime: 49545 s
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | nevents: 400
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | neventsw: 0
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | pid: 14437
[2025-06-03 03:20:31] 2025-06-03 00:58:51,702 | INFO     | pgrp: 14437
[2025-06-03 03:20:31] 2025-06-03 00:58:51,703 | INFO     | corecount: 8
[2025-06-03 03:20:31] 2025-06-03 00:58:51,703 | INFO     | event service: False
[2025-06-03 03:20:31] 2025-06-03 00:58:51,703 | INFO     | sizes: {0: 2404348, 1: 2405204, 2: 2405204, 12: 2405232, 13: 2405466, 23: 2405522, 13172: 2435126, 13173: 2435125, 13177: 2444122, 13178: 2444178, 13265: 2444348}
[2025-06-03 03:20:31] 2025-06-03 00:58:51,703 | INFO     | --------------------------------------------------
[2025-06-03 03:20:31] 2025-06-03 00:58:51,703 | INFO     | 
[2025-06-03 03:20:31] 2025-06-03 00:58:51,703 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 03:20:31] 2025-06-03 00:58:51,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | job 6677379826 has completed (purged errors)
[2025-06-03 03:20:31] 2025-06-03 00:58:51,733 | INFO     | overall cleanup function is called
[2025-06-03 03:20:31] 2025-06-03 00:58:52,742 | INFO     | --- collectZombieJob: --- 10, [14437]
[2025-06-03 03:20:31] 2025-06-03 00:58:52,743 | INFO     | zombie collector waiting for pid 14437
[2025-06-03 03:20:31] 2025-06-03 00:58:52,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:20:31] 2025-06-03 00:58:52,743 | INFO     | collected zombie processes
[2025-06-03 03:20:31] 2025-06-03 00:58:52,743 | INFO     | will attempt to kill all subprocesses of pid=14437
[2025-06-03 03:20:31] 2025-06-03 00:58:52,852 | INFO     | process IDs to be killed: [14437] (in reverse order)
[2025-06-03 03:20:31] 2025-06-03 00:58:53,018 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:20:31] 2025-06-03 00:58:53,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:20:31] 2025-06-03 00:58:53,022 | INFO     | did not find any defunct processes belonging to 14437
[2025-06-03 03:20:31] 2025-06-03 00:58:53,026 | INFO     | did not find any defunct processes belonging to 14437
[2025-06-03 03:20:31] 2025-06-03 00:58:53,026 | INFO     | ready for new job
[2025-06-03 03:20:31] 2025-06-03 00:58:53,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:20:31] 2025-06-03 00:58:53,028 | INFO     | **************************************
[2025-06-03 03:20:31] 2025-06-03 00:58:53,029 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:20:31] 2025-06-03 00:58:53,029 | INFO     | **************************************
[2025-06-03 03:20:31] 2025-06-03 00:58:53,029 | INFO     | 
[2025-06-03 03:20:31] 2025-06-03 00:58:53,029 | INFO     | pilot is running in a VM
[2025-06-03 03:20:31] 2025-06-03 00:58:53,030 | INFO     | architecture information:
[2025-06-03 03:20:31] 2025-06-03 00:58:53,030 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:20:31] 2025-06-03 00:58:53,114 | INFO     | cat /etc/os-release:
[2025-06-03 03:20:31] NAME="CentOS Linux"
[2025-06-03 03:20:31] VERSION="7 (Core)"
[2025-06-03 03:20:31] ID="centos"
[2025-06-03 03:20:31] ID_LIKE="rhel fedora"
[2025-06-03 03:20:31] VERSION_ID="7"
[2025-06-03 03:20:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:20:31] ANSI_COLOR="0;31"
[2025-06-03 03:20:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:20:31] HOME_URL="https://www.centos.org/"
[2025-06-03 03:20:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:20:31] 
[2025-06-03 03:20:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:20:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:20:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:20:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:20:31] 
[2025-06-03 03:20:31] 2025-06-03 00:58:53,114 | INFO     | **************************************
[2025-06-03 03:20:31] 2025-06-03 00:58:53,618 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 03:20:31] 2025-06-03 00:58:53,925 | INFO     | sufficient remaining disk space (496375955456 B)
[2025-06-03 03:20:31] 2025-06-03 00:58:53,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:20:31] 2025-06-03 00:58:53,926 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:20:31] 2025-06-03 00:58:53,926 | INFO     | update_server=False
[2025-06-03 03:20:31] 2025-06-03 00:58:53,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:20:31] 2025-06-03 00:58:53,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:20:31] 2025-06-03 00:58:53,927 | INFO     | aborting loop
[2025-06-03 03:20:31] 2025-06-03 00:58:54,632 | INFO     | all payload control threads have been joined
[2025-06-03 03:20:31] 2025-06-03 00:58:54,744 | INFO     | all data control threads have been joined
[2025-06-03 03:20:31] 2025-06-03 00:58:54,823 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:20:31] 2025-06-03 00:58:54,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:20:31] 2025-06-03 00:58:54,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:20:31] 2025-06-03 00:58:54,849 | INFO     | all job control threads have been joined
[2025-06-03 03:20:31] 2025-06-03 00:58:54,932 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:54,933 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:54,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:20:31] 2025-06-03 00:58:55,156 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,275 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,330 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,415 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,621 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,637 | INFO     | [payload] control thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,646 | INFO     | [job] validate thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,750 | INFO     | [data] control thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,753 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,791 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:55,855 | INFO     | [job] control thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:56,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:20:31] 2025-06-03 00:58:56,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:20:31] 2025-06-03 00:58:57,003 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:58:57,723 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:59:00,182 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:20:31] 2025-06-03 00:59:01,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689623893824)>', '<ExcThread(monitor, started 139689397004032)>']
[2025-06-03 03:20:31] 2025-06-03 00:59:02,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:20:31] 2025-06-03 00:59:02,872 | INFO     | [monitor] control thread has ended
[2025-06-03 03:20:31] 2025-06-03 00:59:06,893 | INFO     | all workflow threads have been joined
[2025-06-03 03:20:31] 2025-06-03 00:59:06,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:20:31] 2025-06-03 00:59:06,894 | INFO     | traces error code: 0
[2025-06-03 03:20:31] 2025-06-03 00:59:06,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:20:31] 2025-06-03 00:59:07,237 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:20:31] 2025-06-03 00:59:07,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:20:31] 2025-06-03 00:59:07,425 [wrapper] pilotpid: 5816
[2025-06-03 03:20:31] 2025-06-03 00:59:07,516 [wrapper] Pilot exit status: 0
[2025-06-03 03:20:31] 2025-06-03 00:59:07,959 [wrapper] pandaids: 6677379826
[2025-06-03 03:20:31] 2025-06-03 00:59:08,997 [wrapper] cleanup supervisor_pilot 18175 5817
[2025-06-03 03:20:31] 2025-06-03 00:59:09,100 [wrapper] Test setup, not cleaning
[2025-06-03 03:20:31] 2025-06-03 00:59:09,208 [wrapper] apfmon messages muted
[2025-06-03 03:20:31] 2025-06-03 00:59:09,301 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:20:31] 2025-06-03 00:59:09,360 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:20:31]  *** Error codes and diagnostics ***
[2025-06-03 03:20:31]     "exeErrorCode": 0,
[2025-06-03 03:20:31]     "exeErrorDiag": "",
[2025-06-03 03:20:31]     "pilotErrorCode": 0,
[2025-06-03 03:20:31]     "pilotErrorDiag": "",
[2025-06-03 03:20:31]  *** Listing of results directory ***
[2025-06-03 03:20:31] total 393152
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 03:20:31] -rwx------. 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:52 queuedata.json
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:20:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:16 run_atlas
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:16 job.xml
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc      6391 Jun  2 23:16 init_data.xml
[2025-06-03 03:20:31] -rw-r--r--. 2 boinc boinc 214065004 Jun  2 23:16 EVNT.45006593._000076.pool.root.1
[2025-06-03 03:20:31] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:16 start_atlas.sh
[2025-06-03 03:20:31] drwxrwx--x. 2 boinc boinc        68 Jun  2 23:16 shared
[2025-06-03 03:20:31] -rw-r--r--. 2 boinc boinc    508873 Jun  2 23:16 input.tar.gz
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:16 boinc_lockfile
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc      2521 Jun  2 23:16 pandaJob.out
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc    987975 Jun  2 23:17 agis_schedconf.cvmfs.json
[2025-06-03 03:20:31] drwx------. 4 boinc boinc      4096 Jun  2 23:17 pilot3
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc 181648600 Jun  3 02:56 HITS.45006595._001884.pool.root.1
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:56 boinc_task_state.xml
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc      1029 Jun  3 02:57 memory_monitor_summary.json
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc   1603667 Jun  3 02:57 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc    370954 Jun  3 02:57 log.45006595._001884.job.log.tgz.1
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc        95 Jun  3 02:58 pilot_heartbeat.json
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc      7690 Jun  3 02:58 heartbeat.json
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc      4416 Jun  3 02:59 pilotlog.txt
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc   1152533 Jun  3 02:59 log.45006595._001884.job.log.1
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc       357 Jun  3 02:59 output.list
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:59 runtime_log
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc   1546240 Jun  3 02:59 result.tar.gz
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc      8659 Jun  3 02:59 runtime_log.err
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc       656 Jun  3 02:59 1sILDmCcMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8dVKDmxwFZMn.diag
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:20 boinc_mmap_file
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:20 wrapper_checkpoint.txt
[2025-06-03 03:20:31] -rw-r--r--. 1 boinc boinc     20518 Jun  3 03:20 stderr.txt
[2025-06-03 03:20:31] HITS file was successfully produced:
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc 181648600 Jun  3 02:56 shared/HITS.pool.root.1
[2025-06-03 03:20:31]  *** Contents of shared directory: ***
[2025-06-03 03:20:31] total 388468
[2025-06-03 03:20:31] -rw-r--r--. 2 boinc boinc 214065004 Jun  2 23:16 ATLAS.root_0
[2025-06-03 03:20:31] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:16 start_atlas.sh
[2025-06-03 03:20:31] -rw-r--r--. 2 boinc boinc    508873 Jun  2 23:16 input.tar.gz
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc 181648600 Jun  3 02:56 HITS.pool.root.1
[2025-06-03 03:20:31] -rw-------. 1 boinc boinc   1546240 Jun  3 02:59 result.tar.gz
03:20:33 (2122): run_atlas exited; CPU time 49715.237604
03:20:33 (2122): called boinc_finish(0)

</stderr_txt>
]]>

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