Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:26:21 (4107314): wrapper (7.7.26015): starting
03:26:21 (4107314): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 03:26:21] Arguments: --nthreads 4
[2025-06-03 03:26:21] Threads: 4
[2025-06-03 03:26:21] Checking for CVMFS
[2025-06-03 03:26:21] No cvmfs_config command found, will try listing directly
[2025-06-03 03:26:21] CVMFS is ok
[2025-06-03 03:26:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 03:26:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 03:26:21] Further information can be found at the LHC@home message board.
[2025-06-03 03:26:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:26:21] Checking for apptainer binary...
[2025-06-03 03:26:21] which: no apptainer in ((null))
[2025-06-03 03:26:21] apptainer is not installed, using version from CVMFS
[2025-06-03 03:26:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:26:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-03 03:26:21] apptainer works
[2025-06-03 03:26:21] Set ATHENA_PROC_NUMBER=4
[2025-06-03 03:26:21] Set ATHENA_CORE_NUMBER=4
[2025-06-03 03:26:21] Starting ATLAS job with PandaID=6677378310
[2025-06-03 03:26:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:30:02]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:30:02] 2025-06-03 04:22:29,095 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6677378310/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,096 | INFO     | extracted standard info from prmon json
[2025-06-03 06:30:02] 2025-06-03 04:22:29,096 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:30:02] 2025-06-03 04:22:29,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:30:02] 2025-06-03 04:22:29,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:30:02] 2025-06-03 04:22:29,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:30:02] 2025-06-03 04:22:29,102 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:30:02] 2025-06-03 04:22:29,102 | INFO     | sum of square deviations: 1605470102.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,104 | INFO     | sum of deviations: -18393535082.000004
[2025-06-03 06:30:02] 2025-06-03 04:22:29,104 | INFO     | sufficient remaining disk space (3448385830912 B)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,104 | INFO     | mean x: 1748919262.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,104 | INFO     | mean y: 2398581.3352601156
[2025-06-03 06:30:02] 2025-06-03 04:22:29,104 | INFO     | -- intersect: 20039400678.79478
[2025-06-03 06:30:02] 2025-06-03 04:22:29,105 | INFO     | intersect: 20039400678.79478
[2025-06-03 06:30:02] 2025-06-03 04:22:29,105 | INFO     | chi2: 1.8335554923398312
[2025-06-03 06:30:02] 2025-06-03 04:22:29,105 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,106 | INFO     | sum of deviations: -17176681858.499998
[2025-06-03 06:30:02] 2025-06-03 04:22:29,106 | INFO     | mean x: 1748919109.5
[2025-06-03 06:30:02] 2025-06-03 04:22:29,107 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,107 | INFO     | mean y: 2399954.089285714
[2025-06-03 06:30:02] 2025-06-03 04:22:29,107 | INFO     | -- intersect: 20434740269.615128
[2025-06-03 06:30:02] 2025-06-03 04:22:29,107 | INFO     | intersect: 20434740269.615128
[2025-06-03 06:30:02] 2025-06-03 04:22:29,108 | INFO     | chi2: 1.8323492681884035
[2025-06-03 06:30:02] 2025-06-03 04:22:29,108 | INFO     | current chi2=1.8323492681884035 (change=0.06578607282228467 %)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,108 | INFO     | right removable region: 167
[2025-06-03 06:30:02] 2025-06-03 04:22:29,108 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,109 | INFO     | sum of deviations: -44588237859.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,109 | INFO     | mean x: 1748919414.5
[2025-06-03 06:30:02] 2025-06-03 04:22:29,109 | INFO     | mean y: 2427747.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,110 | INFO     | -- intersect: 53041903961.87864
[2025-06-03 06:30:02] 2025-06-03 04:22:29,110 | INFO     | intersect: 53041903961.87864
[2025-06-03 06:30:02] 2025-06-03 04:22:29,110 | INFO     | chi2: 0.25667491656476044
[2025-06-03 06:30:02] 2025-06-03 04:22:29,110 | INFO     | current chi2=0.25667491656476044 (change=86.00124634148851 %)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,110 | INFO     | sum of square deviations: 1342841922.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,111 | INFO     | sum of deviations: -39660366645.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,112 | INFO     | mean x: 1748919567.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,112 | INFO     | mean y: 2421814.63803681
[2025-06-03 06:30:02] 2025-06-03 04:22:29,112 | INFO     | -- intersect: 51656149720.69505
[2025-06-03 06:30:02] 2025-06-03 04:22:29,112 | INFO     | intersect: 51656149720.69505
[2025-06-03 06:30:02] 2025-06-03 04:22:29,112 | INFO     | chi2: 0.2512460019660696
[2025-06-03 06:30:02] 2025-06-03 04:22:29,112 | INFO     | current chi2=0.2512460019660696 (change=2.11509354764749 %)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,113 | INFO     | left removable region: 20
[2025-06-03 06:30:02] 2025-06-03 04:22:29,113 | INFO     | sum of square deviations: 984941258.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,114 | INFO     | sum of deviations: -24169632707.000004
[2025-06-03 06:30:02] 2025-06-03 04:22:29,114 | INFO     | mean x: 1748919689.0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,114 | INFO     | mean y: 2405376.285714286
[2025-06-03 06:30:02] 2025-06-03 04:22:29,114 | INFO     | -- intersect: 42919428268.59984
[2025-06-03 06:30:02] 2025-06-03 04:22:29,114 | INFO     | intersect: 42919428268.59984
[2025-06-03 06:30:02] 2025-06-03 04:22:29,115 | INFO     | chi2: 0.20660124981114905
[2025-06-03 06:30:02] 2025-06-03 04:22:29,115 | INFO     | -- intersect: 42919428268.59984
[2025-06-03 06:30:02] 2025-06-03 04:22:29,115 | INFO     | current memory leak: -24.54 B/s (using 147 data points, chi2=0.21)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,116 | INFO     | ..............................
[2025-06-03 06:30:02] 2025-06-03 04:22:29,116 | INFO     | . Timing measurements:
[2025-06-03 06:30:02] 2025-06-03 04:22:29,116 | INFO     | . get job = 0 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,116 | INFO     | . initial setup = 1 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,116 | INFO     | . payload setup = 6 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,116 | INFO     | . stage-in = 0 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,117 | INFO     | . payload execution = 10523 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,117 | INFO     | . stage-out = 1 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,117 | INFO     | . log creation = 0 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,117 | INFO     | ..............................
[2025-06-03 06:30:02] 2025-06-03 04:22:29,159 | INFO     | size of work directory /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6677378310: 2421787 B (within 2537553920 B limit)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,180 | INFO     | pfn file=/scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6677378310/HITS.45006595._001031.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,196 | INFO     | total size of present files: 0 B (workdir size: 2421787 B)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,217 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6677378310/HITS.45006595._001031.pool.root.1 since it does not exist
[2025-06-03 06:30:02] 2025-06-03 04:22:29,227 | INFO     | 
[2025-06-03 06:30:02] 2025-06-03 04:22:29,227 | INFO     | job summary report
[2025-06-03 06:30:02] 2025-06-03 04:22:29,227 | INFO     | --------------------------------------------------
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | PanDA job id: 6677378310
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | task id: 45006595
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | errors: (none)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | pilot state: finished 
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | transexitcode: 0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | exeerrorcode: 0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,228 | INFO     | exeerrordiag: 
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | exitcode: 0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | exitmsg: OK
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | cpuconsumptiontime: 40457 s
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | nevents: 400
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | neventsw: 0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | pid: 4117575
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | pgrp: 4117575
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | corecount: 4
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | event service: False
[2025-06-03 06:30:02] 2025-06-03 04:22:29,229 | INFO     | sizes: {0: 2405016, 1: 2405215, 5: 2405421, 11: 2405477, 10534: 2434291, 10535: 2443254, 10538: 2443438, 10544: 2443636}
[2025-06-03 06:30:02] 2025-06-03 04:22:29,230 | INFO     | --------------------------------------------------
[2025-06-03 06:30:02] 2025-06-03 04:22:29,230 | INFO     | 
[2025-06-03 06:30:02] 2025-06-03 04:22:29,230 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-06-03 06:30:02] 2025-06-03 04:22:29,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:30:02] 2025-06-03 04:22:29,249 | INFO     | job 6677378310 has completed (purged errors)
[2025-06-03 06:30:02] 2025-06-03 04:22:29,250 | INFO     | overall cleanup function is called
[2025-06-03 06:30:02] 2025-06-03 04:22:29,450 | INFO     | number of running child processes to parent process 4117575: 1
[2025-06-03 06:30:02] 2025-06-03 04:22:29,450 | INFO     | maximum number of monitored processes: 6
[2025-06-03 06:30:02] 2025-06-03 04:22:29,451 | INFO     | aborting job monitoring since job object (job id=6677378310) has expired
[2025-06-03 06:30:02] 2025-06-03 04:22:30,258 | INFO     | --- collectZombieJob: --- 10, [4117575]
[2025-06-03 06:30:02] 2025-06-03 04:22:30,258 | INFO     | zombie collector waiting for pid 4117575
[2025-06-03 06:30:02] 2025-06-03 04:22:30,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:30:02] 2025-06-03 04:22:30,259 | INFO     | collected zombie processes
[2025-06-03 06:30:02] 2025-06-03 04:22:30,259 | INFO     | will attempt to kill all subprocesses of pid=4117575
[2025-06-03 06:30:02] 2025-06-03 04:22:30,465 | INFO     | process IDs to be killed: [4117575] (in reverse order)
[2025-06-03 06:30:02] 2025-06-03 04:22:30,526 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:30:02] 2025-06-03 04:22:30,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:30:02] 2025-06-03 04:22:30,533 | INFO     | did not find any defunct processes belonging to 4117575
[2025-06-03 06:30:02] 2025-06-03 04:22:30,538 | INFO     | did not find any defunct processes belonging to 4117575
[2025-06-03 06:30:02] 2025-06-03 04:22:30,538 | INFO     | ready for new job
[2025-06-03 06:30:02] 2025-06-03 04:22:30,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:30:02] 2025-06-03 04:22:30,540 | INFO     | **************************************
[2025-06-03 06:30:02] 2025-06-03 04:22:30,541 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:30:02] 2025-06-03 04:22:30,541 | INFO     | **************************************
[2025-06-03 06:30:02] 2025-06-03 04:22:30,541 | INFO     | 
[2025-06-03 06:30:02] 2025-06-03 04:22:30,543 | INFO     | architecture information:
[2025-06-03 06:30:02] 2025-06-03 04:22:30,543 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:30:02] 2025-06-03 04:22:30,556 | INFO     | cat /etc/os-release:
[2025-06-03 06:30:02] NAME="CentOS Linux"
[2025-06-03 06:30:02] VERSION="7 (Core)"
[2025-06-03 06:30:02] ID="centos"
[2025-06-03 06:30:02] ID_LIKE="rhel fedora"
[2025-06-03 06:30:02] VERSION_ID="7"
[2025-06-03 06:30:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:30:02] ANSI_COLOR="0;31"
[2025-06-03 06:30:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:30:02] HOME_URL="https://www.centos.org/"
[2025-06-03 06:30:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:30:02] 
[2025-06-03 06:30:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:30:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:30:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:30:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:30:02] 
[2025-06-03 06:30:02] 2025-06-03 04:22:30,556 | INFO     | **************************************
[2025-06-03 06:30:02] 2025-06-03 04:22:31,059 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-06-03 06:30:02] 2025-06-03 04:22:31,073 | INFO     | sufficient remaining disk space (3448390025216 B)
[2025-06-03 06:30:02] 2025-06-03 04:22:31,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:30:02] 2025-06-03 04:22:31,073 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:30:02] 2025-06-03 04:22:31,074 | INFO     | update_server=False
[2025-06-03 06:30:02] 2025-06-03 04:22:31,074 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:30:02] 2025-06-03 04:22:31,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:30:02] 2025-06-03 04:22:31,074 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:30:02] 2025-06-03 04:22:31,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:30:02] 2025-06-03 04:22:31,074 | INFO     | aborting loop
[2025-06-03 06:30:02] 2025-06-03 04:22:31,444 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:30:02] 2025-06-03 04:22:31,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:30:02] 2025-06-03 04:22:31,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:30:02] 2025-06-03 04:22:31,494 | INFO     | all payload control threads have been joined
[2025-06-03 06:30:02] 2025-06-03 04:22:31,799 | INFO     | all data control threads have been joined
[2025-06-03 06:30:02] 2025-06-03 04:22:31,907 | INFO     | all job control threads have been joined
[2025-06-03 06:30:02] 2025-06-03 04:22:32,079 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,079 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,079 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,168 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,342 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,500 | INFO     | [payload] control thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,748 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,804 | INFO     | [data] control thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,853 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:32,912 | INFO     | [job] control thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:33,076 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:33,084 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:33,112 | INFO     | [job] validate thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:33,338 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:34,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:30:02] 2025-06-03 04:22:38,248 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:30:02] 2025-06-03 04:22:38,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22611200223040)>', '<ExcThread(monitor, started 22610955949824)>']
[2025-06-03 06:30:02] 2025-06-03 04:22:39,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:30:02] 2025-06-03 04:22:39,480 | INFO     | [monitor] control thread has ended
[2025-06-03 06:30:02] 2025-06-03 04:22:43,919 | INFO     | all workflow threads have been joined
[2025-06-03 06:30:02] 2025-06-03 04:22:43,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:30:02] 2025-06-03 04:22:43,920 | INFO     | traces error code: 0
[2025-06-03 06:30:02] 2025-06-03 04:22:43,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:30:02] 2025-06-03 04:22:44,033 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:30:02] 2025-06-03 04:22:44,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:30:02] 2025-06-03 04:22:44,037 [wrapper] pilotpid: 4110860
[2025-06-03 06:30:02] 2025-06-03 04:22:44,039 [wrapper] Pilot exit status: 0
[2025-06-03 06:30:02] 2025-06-03 04:22:44,047 [wrapper] pandaids: 6677378310
[2025-06-03 06:30:02] 2025-06-03 04:22:44,086 [wrapper] cleanup supervisor_pilot   79500 4110861
[2025-06-03 06:30:02] 2025-06-03 04:22:44,088 [wrapper] Test setup, not cleaning
[2025-06-03 06:30:02] 2025-06-03 04:22:44,091 [wrapper] apfmon messages muted
[2025-06-03 06:30:02] 2025-06-03 04:22:44,093 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:30:02] 2025-06-03 04:22:44,095 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:30:02]  *** Error codes and diagnostics ***
[2025-06-03 06:30:02]     "exeErrorCode": 0,
[2025-06-03 06:30:02]     "exeErrorDiag": "",
[2025-06-03 06:30:02]     "pilotErrorCode": 0,
[2025-06-03 06:30:02]     "pilotErrorDiag": "",
[2025-06-03 06:30:02]  *** Listing of results directory ***
[2025-06-03 06:30:02] total 391488
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 06:30:02] -rwx------ 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc       100 Jun  3 03:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:30:02] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 03:26 run_atlas
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc       105 Jun  3 03:26 job.xml
[2025-06-03 06:30:02] -rw-r--r-- 2 boinc boinc 214712507 Jun  3 03:26 EVNT.45006593._000042.pool.root.1
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc      6419 Jun  3 03:26 init_data.xml
[2025-06-03 06:30:02] -rw-r--r-- 2 boinc boinc     15093 Jun  3 03:26 start_atlas.sh
[2025-06-03 06:30:02] drwxrwx--x 2 boinc boinc      4096 Jun  3 03:26 shared
[2025-06-03 06:30:02] -rw-r--r-- 2 boinc boinc    508876 Jun  3 03:26 input.tar.gz
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc         0 Jun  3 03:26 boinc_lockfile
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc      2521 Jun  3 03:26 pandaJob.out
[2025-06-03 06:30:02] -rw------- 1 boinc boinc    988081 Jun  3 03:26 agis_schedconf.cvmfs.json
[2025-06-03 06:30:02] -rw------- 1 boinc boinc   1603667 Jun  3 03:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:30:02] drwx------ 4 boinc boinc      4096 Jun  3 03:26 pilot3
[2025-06-03 06:30:02] -rw------- 1 boinc boinc 179751531 Jun  3 06:21 HITS.45006595._001031.pool.root.1
[2025-06-03 06:30:02] -rw------- 1 boinc boinc        95 Jun  3 06:22 pilot_heartbeat.json
[2025-06-03 06:30:02] -rw------- 1 boinc boinc      1034 Jun  3 06:22 memory_monitor_summary.json
[2025-06-03 06:30:02] -rw------- 1 boinc boinc    288696 Jun  3 06:22 log.45006595._001031.job.log.tgz.1
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc       528 Jun  3 06:22 boinc_task_state.xml
[2025-06-03 06:30:02] -rw------- 1 boinc boinc      7722 Jun  3 06:22 heartbeat.json
[2025-06-03 06:30:02] -rw------- 1 boinc boinc      4364 Jun  3 06:22 pilotlog.txt
[2025-06-03 06:30:02] -rw------- 1 boinc boinc   1002761 Jun  3 06:22 log.45006595._001031.job.log.1
[2025-06-03 06:30:02] -rw------- 1 boinc boinc       357 Jun  3 06:22 output.list
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc       620 Jun  3 06:22 runtime_log
[2025-06-03 06:30:02] -rw------- 1 boinc boinc   1310720 Jun  3 06:22 result.tar.gz
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc      9021 Jun  3 06:22 runtime_log.err
[2025-06-03 06:30:02] -rw------- 1 boinc boinc       663 Jun  3 06:22 XndNDm6aMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmu3eKDm0UDdBn.diag
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc        26 Jun  3 06:29 wrapper_checkpoint.txt
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc      8192 Jun  3 06:30 boinc_mmap_file
[2025-06-03 06:30:02] -rw-r--r-- 1 boinc boinc     21091 Jun  3 06:30 stderr.txt
[2025-06-03 06:30:02] HITS file was successfully produced:
[2025-06-03 06:30:02] -rw------- 1 boinc boinc 179751531 Jun  3 06:21 shared/HITS.pool.root.1
[2025-06-03 06:30:02]  *** Contents of shared directory: ***
[2025-06-03 06:30:02] total 387024
[2025-06-03 06:30:02] -rw-r--r-- 2 boinc boinc 214712507 Jun  3 03:26 ATLAS.root_0
[2025-06-03 06:30:02] -rw-r--r-- 2 boinc boinc     15093 Jun  3 03:26 start_atlas.sh
[2025-06-03 06:30:02] -rw-r--r-- 2 boinc boinc    508876 Jun  3 03:26 input.tar.gz
[2025-06-03 06:30:02] -rw------- 1 boinc boinc 179751531 Jun  3 06:21 HITS.pool.root.1
[2025-06-03 06:30:02] -rw------- 1 boinc boinc   1310720 Jun  3 06:22 result.tar.gz
06:30:04 (4107314): run_atlas exited; CPU time 40737.805490
06:30:04 (4107314): called boinc_finish(0)

</stderr_txt>
]]>

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