Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:17:50 (1693893): wrapper (7.7.26015): starting
14:17:50 (1693893): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 14:17:50] Arguments: --nthreads 4
[2025-06-06 14:17:50] Threads: 4
[2025-06-06 14:17:50] Checking for CVMFS
[2025-06-06 14:17:50] No cvmfs_config command found, will try listing directly
[2025-06-06 14:17:50] CVMFS is ok
[2025-06-06 14:17:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 14:17:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 14:17:50] Further information can be found at the LHC@home message board.
[2025-06-06 14:17:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 14:17:50] Checking for apptainer binary...
[2025-06-06 14:17:50] which: no apptainer in ((null))
[2025-06-06 14:17:50] apptainer is not installed, using version from CVMFS
[2025-06-06 14:17:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 14:17:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-06 14:17:50] apptainer works
[2025-06-06 14:17:50] Set ATHENA_PROC_NUMBER=4
[2025-06-06 14:17:50] Set ATHENA_CORE_NUMBER=4
[2025-06-06 14:17:50] Starting ATLAS job with PandaID=6677379003
[2025-06-06 14:17:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 16:03:27]  *** The last 200 lines of the pilot log: ***
[2025-06-06 16:03:27] 2025-06-06 14:03:10,588 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1417101/.job.ad'
[2025-06-06 16:03:27] 2025-06-06 14:03:10,588 | INFO     | total number of processed events: 400 (read)
[2025-06-06 16:03:27] 2025-06-06 14:03:10,592 | INFO     | executing command: lscpu
[2025-06-06 16:03:27] 2025-06-06 14:03:10,661 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 16:03:27] 2025-06-06 14:03:10,841 | INFO     | monitor loop #470: job 0:6677379003 is in state 'finished'
[2025-06-06 16:03:27] 2025-06-06 14:03:10,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 16:03:27] 2025-06-06 14:03:13,343 | INFO     | monitor loop #471: job 0:6677379003 is in state 'finished'
[2025-06-06 16:03:27] 2025-06-06 14:03:13,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 16:03:27] 2025-06-06 14:03:13,906 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 16:03:27] 2025-06-06 14:03:13,906 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6677379003/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 16:03:27] 2025-06-06 14:03:13,908 | INFO     | extracted standard info from prmon json
[2025-06-06 16:03:27] 2025-06-06 14:03:13,908 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 16:03:27] 2025-06-06 14:03:13,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 16:03:27] 2025-06-06 14:03:13,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 16:03:27] 2025-06-06 14:03:13,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 16:03:27] 2025-06-06 14:03:13,911 | INFO     | fitting pss+swap vs Time
[2025-06-06 16:03:27] 2025-06-06 14:03:13,911 | INFO     | sum of square deviations: 338804492.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,912 | INFO     | sum of deviations: 5992405211.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,912 | INFO     | mean x: 1749215413.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,912 | INFO     | mean y: 2322648.86407767
[2025-06-06 16:03:27] 2025-06-06 14:03:13,912 | INFO     | -- intersect: -30935896304.923336
[2025-06-06 16:03:27] 2025-06-06 14:03:13,912 | INFO     | intersect: -30935896304.923336
[2025-06-06 16:03:27] 2025-06-06 14:03:13,912 | INFO     | chi2: 1.4903043452483005
[2025-06-06 16:03:27] 2025-06-06 14:03:13,912 | INFO     | sum of square deviations: 291817564.5
[2025-06-06 16:03:27] 2025-06-06 14:03:13,913 | INFO     | sum of deviations: 5853972695.499999
[2025-06-06 16:03:27] 2025-06-06 14:03:13,913 | INFO     | mean x: 1749215260.5
[2025-06-06 16:03:27] 2025-06-06 14:03:13,913 | INFO     | mean y: 2322200.6836734693
[2025-06-06 16:03:27] 2025-06-06 14:03:13,913 | INFO     | -- intersect: -35087609384.01681
[2025-06-06 16:03:27] 2025-06-06 14:03:13,913 | INFO     | intersect: -35087609384.01681
[2025-06-06 16:03:27] 2025-06-06 14:03:13,913 | INFO     | chi2: 1.493819431771583
[2025-06-06 16:03:27] 2025-06-06 14:03:13,913 | INFO     | current chi2=1.493819431771583 (change=-0.23586367002753542 %)
[2025-06-06 16:03:27] 2025-06-06 14:03:13,914 | INFO     | right removable region: 97
[2025-06-06 16:03:27] 2025-06-06 14:03:13,914 | INFO     | sum of square deviations: 291817564.5
[2025-06-06 16:03:27] 2025-06-06 14:03:13,914 | INFO     | sum of deviations: -7236219916.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,914 | INFO     | mean x: 1749215565.5
[2025-06-06 16:03:27] 2025-06-06 14:03:13,914 | INFO     | mean y: 2364460.8571428573
[2025-06-06 16:03:27] 2025-06-06 14:03:13,914 | INFO     | -- intersect: 43377781338.64519
[2025-06-06 16:03:27] 2025-06-06 14:03:13,915 | INFO     | intersect: 43377781338.64519
[2025-06-06 16:03:27] 2025-06-06 14:03:13,915 | INFO     | chi2: 0.04427580298325278
[2025-06-06 16:03:27] 2025-06-06 14:03:13,915 | INFO     | current chi2=0.04427580298325278 (change=97.0290764349965 %)
[2025-06-06 16:03:27] 2025-06-06 14:03:13,915 | INFO     | sum of square deviations: 249388862.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,915 | INFO     | sum of deviations: -4977558642.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | mean x: 1749215718.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | mean y: 2356317.806451613
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | -- intersect: 34914997339.65423
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | intersect: 34914997339.65423
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | chi2: 0.03747394825687915
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | current chi2=0.03747394825687915 (change=15.362464976516444 %)
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | left removable region: 20
[2025-06-06 16:03:27] 2025-06-06 14:03:13,916 | INFO     | sum of square deviations: 141539398.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | sum of deviations: -568062134.0000002
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | mean x: 1749215840.0
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | mean y: 2338985.2077922076
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | -- intersect: 7022739643.524871
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | intersect: 7022739643.524871
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | chi2: 0.0003364820854033147
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | -- intersect: 7022739643.524871
[2025-06-06 16:03:27] 2025-06-06 14:03:13,917 | INFO     | current memory leak: -4.01 B/s (using 77 data points, chi2=0.00)
[2025-06-06 16:03:27] 2025-06-06 14:03:13,918 | INFO     | ..............................
[2025-06-06 16:03:27] 2025-06-06 14:03:13,918 | INFO     | . Timing measurements:
[2025-06-06 16:03:27] 2025-06-06 14:03:13,918 | INFO     | . get job = 0 s
[2025-06-06 16:03:27] 2025-06-06 14:03:13,918 | INFO     | . initial setup = 1 s
[2025-06-06 16:03:27] 2025-06-06 14:03:13,918 | INFO     | . payload setup = 4 s
[2025-06-06 16:03:27] 2025-06-06 14:03:13,918 | INFO     | . stage-in = 0 s
[2025-06-06 16:03:27] 2025-06-06 14:03:13,919 | INFO     | . payload execution = 6285 s
[2025-06-06 16:03:27] 2025-06-06 14:03:13,919 | INFO     | . stage-out = 0 s
[2025-06-06 16:03:27] 2025-06-06 14:03:13,919 | INFO     | . log creation = 0 s
[2025-06-06 16:03:27] 2025-06-06 14:03:13,919 | INFO     | ..............................
[2025-06-06 16:03:27] 2025-06-06 14:03:14,016 | INFO     | 
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | job summary report
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | --------------------------------------------------
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | PanDA job id: 6677379003
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | task id: 45006595
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | errors: (none)
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | pilot state: finished 
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | transexitcode: 0
[2025-06-06 16:03:27] 2025-06-06 14:03:14,017 | INFO     | exeerrorcode: 0
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | exeerrordiag: 
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | exitcode: 0
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | exitmsg: OK
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | cpuconsumptiontime: 24051 s
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | nevents: 400
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | neventsw: 0
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | pid: 1715999
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | pgrp: 1715999
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | corecount: 4
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | event service: False
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | sizes: {0: 2397345, 3: 2397551, 11: 2397579, 6293: 2424545, 6294: 2433563, 6297: 2433563, 6300: 2433861}
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | --------------------------------------------------
[2025-06-06 16:03:27] 2025-06-06 14:03:14,018 | INFO     | 
[2025-06-06 16:03:27] 2025-06-06 14:03:14,019 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-06 16:03:27] 2025-06-06 14:03:14,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,038 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | job 6677379003 has completed (purged errors)
[2025-06-06 16:03:27] 2025-06-06 14:03:14,040 | INFO     | overall cleanup function is called
[2025-06-06 16:03:27] 2025-06-06 14:03:15,048 | INFO     | --- collectZombieJob: --- 10, [1715999]
[2025-06-06 16:03:27] 2025-06-06 14:03:15,048 | INFO     | zombie collector waiting for pid 1715999
[2025-06-06 16:03:27] 2025-06-06 14:03:15,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 16:03:27] 2025-06-06 14:03:15,049 | INFO     | collected zombie processes
[2025-06-06 16:03:27] 2025-06-06 14:03:15,049 | INFO     | will attempt to kill all subprocesses of pid=1715999
[2025-06-06 16:03:27] 2025-06-06 14:03:15,362 | INFO     | process IDs to be killed: [1715999] (in reverse order)
[2025-06-06 16:03:27] 2025-06-06 14:03:15,457 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 16:03:27] 2025-06-06 14:03:15,457 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 16:03:27] 2025-06-06 14:03:15,467 | INFO     | did not find any defunct processes belonging to 1715999
[2025-06-06 16:03:27] 2025-06-06 14:03:15,475 | INFO     | did not find any defunct processes belonging to 1715999
[2025-06-06 16:03:27] 2025-06-06 14:03:15,476 | INFO     | ready for new job
[2025-06-06 16:03:27] 2025-06-06 14:03:15,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 16:03:27] 2025-06-06 14:03:15,477 | INFO     | **************************************
[2025-06-06 16:03:27] 2025-06-06 14:03:15,478 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 16:03:27] 2025-06-06 14:03:15,478 | INFO     | **************************************
[2025-06-06 16:03:27] 2025-06-06 14:03:15,478 | INFO     | 
[2025-06-06 16:03:27] 2025-06-06 14:03:15,482 | INFO     | architecture information:
[2025-06-06 16:03:27] 2025-06-06 14:03:15,482 | INFO     | executing command: cat /etc/os-release
[2025-06-06 16:03:27] 2025-06-06 14:03:15,497 | INFO     | cat /etc/os-release:
[2025-06-06 16:03:27] NAME="CentOS Linux"
[2025-06-06 16:03:27] VERSION="7 (Core)"
[2025-06-06 16:03:27] ID="centos"
[2025-06-06 16:03:27] ID_LIKE="rhel fedora"
[2025-06-06 16:03:27] VERSION_ID="7"
[2025-06-06 16:03:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 16:03:27] ANSI_COLOR="0;31"
[2025-06-06 16:03:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 16:03:27] HOME_URL="https://www.centos.org/"
[2025-06-06 16:03:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 16:03:27] 
[2025-06-06 16:03:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 16:03:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 16:03:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 16:03:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 16:03:27] 
[2025-06-06 16:03:27] 2025-06-06 14:03:15,497 | INFO     | **************************************
[2025-06-06 16:03:27] 2025-06-06 14:03:16,000 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-06 16:03:27] 2025-06-06 14:03:16,017 | INFO     | sufficient remaining disk space (685791772672 B)
[2025-06-06 16:03:27] 2025-06-06 14:03:16,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 16:03:27] 2025-06-06 14:03:16,017 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 16:03:27] 2025-06-06 14:03:16,017 | INFO     | update_server=False
[2025-06-06 16:03:27] 2025-06-06 14:03:16,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 16:03:27] 2025-06-06 14:03:16,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:03:27] 2025-06-06 14:03:16,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 16:03:27] 2025-06-06 14:03:16,535 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 16:03:27] 2025-06-06 14:03:16,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 16:03:27] 2025-06-06 14:03:16,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 16:03:27] 2025-06-06 14:03:16,537 | INFO     | all payload control threads have been joined
[2025-06-06 16:03:27] 2025-06-06 14:03:16,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 16:03:27] 2025-06-06 14:03:16,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 16:03:27] 2025-06-06 14:03:16,852 | INFO     | aborting loop
[2025-06-06 16:03:27] 2025-06-06 14:03:17,023 | INFO     | [job] retrieve thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:17,023 | INFO     | [job] queue monitor thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:17,111 | INFO     | all data control threads have been joined
[2025-06-06 16:03:27] 2025-06-06 14:03:17,287 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:17,333 | INFO     | all job control threads have been joined
[2025-06-06 16:03:27] 2025-06-06 14:03:17,542 | INFO     | [payload] control thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:17,856 | INFO     | [job] validate thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:17,858 | INFO     | [job] job monitor thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,007 | INFO     | [payload] validate_post thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,052 | INFO     | [payload] failed_post thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,066 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,076 | INFO     | [data] copytool_in thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,078 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,113 | INFO     | [data] control thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,338 | INFO     | [job] control thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:18,341 | INFO     | [data] copytool_out thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:20,596 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 16:03:27] 2025-06-06 14:03:21,906 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22722864068416)>', '<ExcThread(monitor, started 22722625107712)>']
[2025-06-06 16:03:27] 2025-06-06 14:03:22,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 16:03:27] 2025-06-06 14:03:22,556 | INFO     | [monitor] control thread has ended
[2025-06-06 16:03:27] 2025-06-06 14:03:26,931 | INFO     | all workflow threads have been joined
[2025-06-06 16:03:27] 2025-06-06 14:03:26,932 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 16:03:27] 2025-06-06 14:03:26,932 | INFO     | traces error code: 0
[2025-06-06 16:03:27] 2025-06-06 14:03:26,932 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 16:03:27] 2025-06-06 14:03:27,063 [wrapper] ==== pilot stdout END ====
[2025-06-06 16:03:27] 2025-06-06 14:03:27,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 16:03:27] 2025-06-06 14:03:27,068 [wrapper] pilotpid: 1701948
[2025-06-06 16:03:27] 2025-06-06 14:03:27,071 [wrapper] Pilot exit status: 0
[2025-06-06 16:03:27] 2025-06-06 14:03:27,081 [wrapper] pandaids: 6677379003
[2025-06-06 16:03:27] 2025-06-06 14:03:27,139 [wrapper] cleanup supervisor_pilot 1980738 1701949
[2025-06-06 16:03:27] 2025-06-06 14:03:27,142 [wrapper] Test setup, not cleaning
[2025-06-06 16:03:27] 2025-06-06 14:03:27,145 [wrapper] apfmon messages muted
[2025-06-06 16:03:27] 2025-06-06 14:03:27,147 [wrapper] ==== wrapper stdout END ====
[2025-06-06 16:03:27] 2025-06-06 14:03:27,150 [wrapper] ==== wrapper stderr END ====
[2025-06-06 16:03:27]  *** Error codes and diagnostics ***
[2025-06-06 16:03:27]     "exeErrorCode": 0,
[2025-06-06 16:03:27]     "exeErrorDiag": "",
[2025-06-06 16:03:27]     "pilotErrorCode": 0,
[2025-06-06 16:03:27]     "pilotErrorDiag": "",
[2025-06-06 16:03:27]  *** Listing of results directory ***
[2025-06-06 16:03:27] total 389220
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-06 16:03:27] -rwx------ 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc       100 Jun  6 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 16:03:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 14:17 run_atlas
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc       105 Jun  6 14:17 job.xml
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc      6635 Jun  6 14:17 init_data.xml
[2025-06-06 16:03:27] -rw-r--r-- 2 boinc boinc 213833604 Jun  6 14:17 EVNT.45006593._000057.pool.root.1
[2025-06-06 16:03:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:17 start_atlas.sh
[2025-06-06 16:03:27] drwxrwx--x 2 boinc boinc      4096 Jun  6 14:17 shared
[2025-06-06 16:03:27] -rw-r--r-- 2 boinc boinc    508874 Jun  6 14:17 input.tar.gz
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc         0 Jun  6 14:17 boinc_lockfile
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc      2521 Jun  6 14:17 pandaJob.out
[2025-06-06 16:03:27] -rw------- 1 boinc boinc    985741 Jun  6 14:17 agis_schedconf.cvmfs.json
[2025-06-06 16:03:27] -rw------- 1 boinc boinc   1598969 Jun  6 14:17 agis_ddmendpoints.agis.ALL.json
[2025-06-06 16:03:27] drwx------ 4 boinc boinc      4096 Jun  6 14:17 pilot3
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc       529 Jun  6 16:02 boinc_task_state.xml
[2025-06-06 16:03:27] -rw------- 1 boinc boinc 179130126 Jun  6 16:02 HITS.45006595._001423.pool.root.1
[2025-06-06 16:03:27] -rw------- 1 boinc boinc        95 Jun  6 16:02 pilot_heartbeat.json
[2025-06-06 16:03:27] -rw------- 1 boinc boinc      1037 Jun  6 16:03 memory_monitor_summary.json
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc      8192 Jun  6 16:03 boinc_mmap_file
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc        27 Jun  6 16:03 wrapper_checkpoint.txt
[2025-06-06 16:03:27] -rw------- 1 boinc boinc    270877 Jun  6 16:03 log.45006595._001423.job.log.tgz.1
[2025-06-06 16:03:27] -rw------- 1 boinc boinc      7734 Jun  6 16:03 heartbeat.json
[2025-06-06 16:03:27] -rw------- 1 boinc boinc      4363 Jun  6 16:03 pilotlog.txt
[2025-06-06 16:03:27] -rw------- 1 boinc boinc    614257 Jun  6 16:03 log.45006595._001423.job.log.1
[2025-06-06 16:03:27] -rw------- 1 boinc boinc       357 Jun  6 16:03 output.list
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc       620 Jun  6 16:03 runtime_log
[2025-06-06 16:03:27] -rw------- 1 boinc boinc    901120 Jun  6 16:03 result.tar.gz
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc      9025 Jun  6 16:03 runtime_log.err
[2025-06-06 16:03:27] -rw------- 1 boinc boinc       661 Jun  6 16:03 HRENDmubMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlbVKDm7gl5qn.diag
[2025-06-06 16:03:27] -rw-r--r-- 1 boinc boinc     20937 Jun  6 16:03 stderr.txt
[2025-06-06 16:03:27] HITS file was successfully produced:
[2025-06-06 16:03:27] -rw------- 1 boinc boinc 179130126 Jun  6 16:02 shared/HITS.pool.root.1
[2025-06-06 16:03:27]  *** Contents of shared directory: ***
[2025-06-06 16:03:27] total 385160
[2025-06-06 16:03:27] -rw-r--r-- 2 boinc boinc 213833604 Jun  6 14:17 ATLAS.root_0
[2025-06-06 16:03:27] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:17 start_atlas.sh
[2025-06-06 16:03:27] -rw-r--r-- 2 boinc boinc    508874 Jun  6 14:17 input.tar.gz
[2025-06-06 16:03:27] -rw------- 1 boinc boinc 179130126 Jun  6 16:02 HITS.pool.root.1
[2025-06-06 16:03:27] -rw------- 1 boinc boinc    901120 Jun  6 16:03 result.tar.gz
16:03:28 (1693893): run_atlas exited; CPU time 24254.060900
16:03:28 (1693893): called boinc_finish(0)

</stderr_txt>
]]>

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