Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:48:49 (3363934): wrapper (7.7.26015): starting
17:48:49 (3363934): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 17:48:49] Arguments: --nthreads 4
[2025-06-04 17:48:49] Threads: 4
[2025-06-04 17:48:49] Checking for CVMFS
[2025-06-04 17:48:49] No cvmfs_config command found, will try listing directly
[2025-06-04 17:48:49] CVMFS is ok
[2025-06-04 17:48:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:48:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:48:49] Further information can be found at the LHC@home message board.
[2025-06-04 17:48:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:48:49] Checking for apptainer binary...
[2025-06-04 17:48:49] which: no apptainer in ((null))
[2025-06-04 17:48:49] apptainer is not installed, using version from CVMFS
[2025-06-04 17:48:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:48:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-04 17:48:49] apptainer works
[2025-06-04 17:48:49] Set ATHENA_PROC_NUMBER=4
[2025-06-04 17:48:49] Set ATHENA_CORE_NUMBER=4
[2025-06-04 17:48:49] Starting ATLAS job with PandaID=6677378663
[2025-06-04 17:48:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:11:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:11:50] 2025-06-04 18:10:55,096 | INFO     | PID=3367871 has CPU usage=21.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 20:11:50] 2025-06-04 18:10:55,096 | INFO     | .. there are 14 such processes running
[2025-06-04 20:11:50] 2025-06-04 18:10:57,091 | INFO     | monitor loop #590: job 0:6677378663 is in state 'finished'
[2025-06-04 20:11:50] 2025-06-04 18:10:57,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,118 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 20:11:50] 2025-06-04 18:10:59,119 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6677378663/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,120 | INFO     | extracted standard info from prmon json
[2025-06-04 20:11:50] 2025-06-04 18:10:59,120 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:11:50] 2025-06-04 18:10:59,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:11:50] 2025-06-04 18:10:59,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:11:50] 2025-06-04 18:10:59,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:11:50] 2025-06-04 18:10:59,123 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:11:50] 2025-06-04 18:10:59,124 | INFO     | sum of square deviations: 832722590.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,124 | INFO     | sum of deviations: 13385548725.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,124 | INFO     | mean x: 1749056388.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,125 | INFO     | mean y: 2307233.35971223
[2025-06-04 20:11:50] 2025-06-04 18:10:59,125 | INFO     | -- intersect: -28112793504.2659
[2025-06-04 20:11:50] 2025-06-04 18:10:59,125 | INFO     | intersect: -28112793504.2659
[2025-06-04 20:11:50] 2025-06-04 18:10:59,125 | INFO     | chi2: 1.530618023681762
[2025-06-04 20:11:50] 2025-06-04 18:10:59,125 | INFO     | sum of square deviations: 746051197.5
[2025-06-04 20:11:50] 2025-06-04 18:10:59,126 | INFO     | sum of deviations: 12805701055.5
[2025-06-04 20:11:50] 2025-06-04 18:10:59,126 | INFO     | mean x: 1749056235.5
[2025-06-04 20:11:50] 2025-06-04 18:10:59,126 | INFO     | mean y: 2306212.9776119404
[2025-06-04 20:11:50] 2025-06-04 18:10:59,126 | INFO     | -- intersect: -30019616352.29138
[2025-06-04 20:11:50] 2025-06-04 18:10:59,126 | INFO     | intersect: -30019616352.29138
[2025-06-04 20:11:50] 2025-06-04 18:10:59,126 | INFO     | chi2: 1.5327758450507833
[2025-06-04 20:11:50] 2025-06-04 18:10:59,127 | INFO     | current chi2=1.5327758450507833 (change=-0.14097713052084584 %)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,127 | INFO     | right removable region: 133
[2025-06-04 20:11:50] 2025-06-04 18:10:59,127 | INFO     | sum of square deviations: 746051197.5
[2025-06-04 20:11:50] 2025-06-04 18:10:59,127 | INFO     | sum of deviations: -6028653271.5
[2025-06-04 20:11:50] 2025-06-04 18:10:59,128 | INFO     | mean x: 1749056540.5
[2025-06-04 20:11:50] 2025-06-04 18:10:59,128 | INFO     | mean y: 2340792.231343284
[2025-06-04 20:11:50] 2025-06-04 18:10:59,128 | INFO     | -- intersect: 14136029566.216318
[2025-06-04 20:11:50] 2025-06-04 18:10:59,128 | INFO     | intersect: 14136029566.216318
[2025-06-04 20:11:50] 2025-06-04 18:10:59,128 | INFO     | chi2: 0.03197158663431487
[2025-06-04 20:11:50] 2025-06-04 18:10:59,128 | INFO     | current chi2=0.03197158663431487 (change=97.91119755944007 %)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,128 | INFO     | sum of square deviations: 665612480.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,129 | INFO     | sum of deviations: -4209114436.0000014
[2025-06-04 20:11:50] 2025-06-04 18:10:59,129 | INFO     | mean x: 1749056693.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,129 | INFO     | mean y: 2337324.8372093025
[2025-06-04 20:11:50] 2025-06-04 18:10:59,129 | INFO     | -- intersect: 11062796671.826502
[2025-06-04 20:11:50] 2025-06-04 18:10:59,130 | INFO     | intersect: 11062796671.826502
[2025-06-04 20:11:50] 2025-06-04 18:10:59,130 | INFO     | chi2: 0.02639124103740137
[2025-06-04 20:11:50] 2025-06-04 18:10:59,130 | INFO     | current chi2=0.02639124103740137 (change=17.454077774557973 %)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,130 | INFO     | left removable region: 20
[2025-06-04 20:11:50] 2025-06-04 18:10:59,130 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | sum of deviations: -150194566.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | mean x: 1749056815.0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | mean y: 2328032.530973451
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | -- intersect: 589517687.7540845
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | intersect: 589517687.7540845
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | chi2: 0.009047376315006876
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | -- intersect: 589517687.7540845
[2025-06-04 20:11:50] 2025-06-04 18:10:59,131 | INFO     | current memory leak: -0.34 B/s (using 113 data points, chi2=0.01)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | ..............................
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . Timing measurements:
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . get job = 0 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . initial setup = 1 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . payload setup = 10 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . stage-in = 0 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . payload execution = 8473 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . stage-out = 0 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | . log creation = 0 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,132 | INFO     | ..............................
[2025-06-04 20:11:50] 2025-06-04 18:10:59,229 | INFO     | 
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | job summary report
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | --------------------------------------------------
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | PanDA job id: 6677378663
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | task id: 45006595
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | errors: (none)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | pilot state: finished 
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | transexitcode: 0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | exeerrorcode: 0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | exeerrordiag: 
[2025-06-04 20:11:50] 2025-06-04 18:10:59,230 | INFO     | exitcode: 0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | exitmsg: OK
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | cpuconsumptiontime: 32082 s
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | nevents: 400
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | neventsw: 0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | pid: 3375240
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | pgrp: 3375240
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | corecount: 4
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | event service: False
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | sizes: {0: 2397175, 1: 2397374, 8: 2397580, 12: 2397608, 8488: 2425759, 8490: 2434908, 8498: 2435022}
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | --------------------------------------------------
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | 
[2025-06-04 20:11:50] 2025-06-04 18:10:59,231 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-06-04 20:11:50] 2025-06-04 18:10:59,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,260 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,261 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:11:50] 2025-06-04 18:10:59,261 | INFO     | job 6677378663 has completed (purged errors)
[2025-06-04 20:11:50] 2025-06-04 18:10:59,261 | INFO     | overall cleanup function is called
[2025-06-04 20:11:50] 2025-06-04 18:11:00,270 | INFO     | --- collectZombieJob: --- 10, [3375240]
[2025-06-04 20:11:50] 2025-06-04 18:11:00,270 | INFO     | zombie collector waiting for pid 3375240
[2025-06-04 20:11:50] 2025-06-04 18:11:00,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:11:50] 2025-06-04 18:11:00,271 | INFO     | collected zombie processes
[2025-06-04 20:11:50] 2025-06-04 18:11:00,271 | INFO     | will attempt to kill all subprocesses of pid=3375240
[2025-06-04 20:11:50] 2025-06-04 18:11:00,930 | INFO     | process IDs to be killed: [3375240] (in reverse order)
[2025-06-04 20:11:50] 2025-06-04 18:11:01,175 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:11:50] 2025-06-04 18:11:01,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:11:50] 2025-06-04 18:11:01,202 | INFO     | did not find any defunct processes belonging to 3375240
[2025-06-04 20:11:50] 2025-06-04 18:11:01,225 | INFO     | did not find any defunct processes belonging to 3375240
[2025-06-04 20:11:50] 2025-06-04 18:11:01,225 | INFO     | ready for new job
[2025-06-04 20:11:50] 2025-06-04 18:11:01,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:11:50] 2025-06-04 18:11:01,227 | INFO     | **************************************
[2025-06-04 20:11:50] 2025-06-04 18:11:01,228 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:11:50] 2025-06-04 18:11:01,228 | INFO     | **************************************
[2025-06-04 20:11:50] 2025-06-04 18:11:01,228 | INFO     | 
[2025-06-04 20:11:50] 2025-06-04 18:11:01,236 | INFO     | architecture information:
[2025-06-04 20:11:50] 2025-06-04 18:11:01,236 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:11:50] 2025-06-04 18:11:01,259 | INFO     | cat /etc/os-release:
[2025-06-04 20:11:50] NAME="CentOS Linux"
[2025-06-04 20:11:50] VERSION="7 (Core)"
[2025-06-04 20:11:50] ID="centos"
[2025-06-04 20:11:50] ID_LIKE="rhel fedora"
[2025-06-04 20:11:50] VERSION_ID="7"
[2025-06-04 20:11:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:11:50] ANSI_COLOR="0;31"
[2025-06-04 20:11:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:11:50] HOME_URL="https://www.centos.org/"
[2025-06-04 20:11:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:11:50] 
[2025-06-04 20:11:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:11:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:11:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:11:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:11:50] 
[2025-06-04 20:11:50] 2025-06-04 18:11:01,259 | INFO     | **************************************
[2025-06-04 20:11:50] 2025-06-04 18:11:01,762 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-06-04 20:11:50] 2025-06-04 18:11:01,785 | INFO     | sufficient remaining disk space (3230521098240 B)
[2025-06-04 20:11:50] 2025-06-04 18:11:01,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:11:50] 2025-06-04 18:11:01,785 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:11:50] 2025-06-04 18:11:01,785 | INFO     | update_server=False
[2025-06-04 20:11:50] 2025-06-04 18:11:01,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:11:50] 2025-06-04 18:11:01,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:11:50] 2025-06-04 18:11:01,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:11:50] 2025-06-04 18:11:01,786 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:11:50] 2025-06-04 18:11:01,787 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:11:50] 2025-06-04 18:11:01,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:11:50] 2025-06-04 18:11:01,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:11:50] 2025-06-04 18:11:01,855 | INFO     | all data control threads have been joined
[2025-06-04 20:11:50] 2025-06-04 18:11:02,104 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 20:11:50] 2025-06-04 18:11:02,104 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 20:11:50] 2025-06-04 18:11:02,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:11:50] 2025-06-04 18:11:02,104 | INFO     | will abort loop
[2025-06-04 20:11:50] 2025-06-04 18:11:02,376 | INFO     | all job control threads have been joined
[2025-06-04 20:11:50] 2025-06-04 18:11:02,791 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:02,806 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:02,807 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:02,807 | INFO     | [job] validate thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:02,844 | INFO     | all payload control threads have been joined
[2025-06-04 20:11:50] 2025-06-04 18:11:02,860 | INFO     | [data] control thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:03,090 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:03,109 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:03,205 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:03,381 | INFO     | [job] control thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:03,457 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:03,792 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:03,849 | INFO     | [payload] control thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:04,120 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:04,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:11:50] 2025-06-04 18:11:05,246 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:05,792 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:12,771 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:11:50] 2025-06-04 18:11:13,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:11:50] 2025-06-04 18:11:14,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23277899921216)>', '<ExcThread(monitor, started 23277663651584)>']
[2025-06-04 20:11:50] 2025-06-04 18:11:14,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:11:50] 2025-06-04 18:11:14,853 | INFO     | [monitor] control thread has ended
[2025-06-04 20:11:50] 2025-06-04 18:11:19,535 | INFO     | all workflow threads have been joined
[2025-06-04 20:11:50] 2025-06-04 18:11:19,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:11:50] 2025-06-04 18:11:19,535 | INFO     | traces error code: 0
[2025-06-04 20:11:50] 2025-06-04 18:11:19,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:11:50] 2025-06-04 18:11:19,678 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:11:50] 2025-06-04 18:11:19,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:11:50] 2025-06-04 18:11:19,687 [wrapper] pilotpid: 3367871
[2025-06-04 20:11:50] 2025-06-04 18:11:19,690 [wrapper] Pilot exit status: 0
[2025-06-04 20:11:50] 2025-06-04 18:11:19,708 [wrapper] pandaids: 6677378663
[2025-06-04 20:11:50] 2025-06-04 18:11:19,906 [wrapper] cleanup supervisor_pilot 3888245 3367872
[2025-06-04 20:11:50] 2025-06-04 18:11:19,910 [wrapper] Test setup, not cleaning
[2025-06-04 20:11:50] 2025-06-04 18:11:19,915 [wrapper] apfmon messages muted
[2025-06-04 20:11:50] 2025-06-04 18:11:19,919 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:11:50] 2025-06-04 18:11:19,923 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:11:50]  *** Error codes and diagnostics ***
[2025-06-04 20:11:50]     "exeErrorCode": 0,
[2025-06-04 20:11:50]     "exeErrorDiag": "",
[2025-06-04 20:11:50]     "pilotErrorCode": 0,
[2025-06-04 20:11:50]     "pilotErrorDiag": "",
[2025-06-04 20:11:50]  *** Listing of results directory ***
[2025-06-04 20:11:50] total 390380
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-04 20:11:50] -rwx------ 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:11:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:48 run_atlas
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:48 job.xml
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc      6687 Jun  4 17:48 init_data.xml
[2025-06-04 20:11:50] -rw-r--r-- 2 boinc boinc 213955563 Jun  4 17:48 EVNT.45006593._000055.pool.root.1
[2025-06-04 20:11:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:48 start_atlas.sh
[2025-06-04 20:11:50] drwxrwx--x 2 boinc boinc      4096 Jun  4 17:48 shared
[2025-06-04 20:11:50] -rw-r--r-- 2 boinc boinc    508876 Jun  4 17:48 input.tar.gz
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:48 boinc_lockfile
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc      2521 Jun  4 17:48 pandaJob.out
[2025-06-04 20:11:50] -rw------- 1 boinc boinc    990989 Jun  4 17:49 agis_schedconf.cvmfs.json
[2025-06-04 20:11:50] -rw------- 1 boinc boinc   1598969 Jun  4 17:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:11:50] drwx------ 4 boinc boinc      4096 Jun  4 17:49 pilot3
[2025-06-04 20:11:50] -rw------- 1 boinc boinc 179780362 Jun  4 20:10 HITS.45006595._001370.pool.root.1
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc       530 Jun  4 20:10 boinc_task_state.xml
[2025-06-04 20:11:50] -rw------- 1 boinc boinc        95 Jun  4 20:10 pilot_heartbeat.json
[2025-06-04 20:11:50] -rw------- 1 boinc boinc      1030 Jun  4 20:10 memory_monitor_summary.json
[2025-06-04 20:11:50] -rw------- 1 boinc boinc    287444 Jun  4 20:10 log.45006595._001370.job.log.tgz.1
[2025-06-04 20:11:50] -rw------- 1 boinc boinc      7693 Jun  4 20:10 heartbeat.json
[2025-06-04 20:11:50] -rw------- 1 boinc boinc      4746 Jun  4 20:11 pilotlog.txt
[2025-06-04 20:11:50] -rw------- 1 boinc boinc    801600 Jun  4 20:11 log.45006595._001370.job.log.1
[2025-06-04 20:11:50] -rw------- 1 boinc boinc       357 Jun  4 20:11 output.list
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc       620 Jun  4 20:11 runtime_log
[2025-06-04 20:11:50] -rw------- 1 boinc boinc   1105920 Jun  4 20:11 result.tar.gz
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc      9040 Jun  4 20:11 runtime_log.err
[2025-06-04 20:11:50] -rw------- 1 boinc boinc       663 Jun  4 20:11 5vUMDmubMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDbVKDmWP6dtm.diag
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc        26 Jun  4 20:11 wrapper_checkpoint.txt
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc      8192 Jun  4 20:11 boinc_mmap_file
[2025-06-04 20:11:50] -rw-r--r-- 1 boinc boinc     20883 Jun  4 20:11 stderr.txt
[2025-06-04 20:11:50] HITS file was successfully produced:
[2025-06-04 20:11:50] -rw------- 1 boinc boinc 179780362 Jun  4 20:10 shared/HITS.pool.root.1
[2025-06-04 20:11:50]  *** Contents of shared directory: ***
[2025-06-04 20:11:50] total 386116
[2025-06-04 20:11:50] -rw-r--r-- 2 boinc boinc 213955563 Jun  4 17:48 ATLAS.root_0
[2025-06-04 20:11:50] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:48 start_atlas.sh
[2025-06-04 20:11:50] -rw-r--r-- 2 boinc boinc    508876 Jun  4 17:48 input.tar.gz
[2025-06-04 20:11:50] -rw------- 1 boinc boinc 179780362 Jun  4 20:10 HITS.pool.root.1
[2025-06-04 20:11:50] -rw------- 1 boinc boinc   1105920 Jun  4 20:11 result.tar.gz
20:11:51 (3363934): run_atlas exited; CPU time 32585.929374
20:11:51 (3363934): called boinc_finish(0)

</stderr_txt>
]]>

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