Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:45:54 (1599): wrapper (7.7.26015): starting
22:45:54 (1599): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 22:45:54] Arguments: --nthreads 8
[2025-06-02 22:45:54] Threads: 8
[2025-06-02 22:45:54] Checking for CVMFS
[2025-06-02 22:45:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 22:45:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 22:45:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 22:45:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 22:45:56] 2.11.2.0 4277 30814 95892 146718 0 59 13334536 25165825 4634 130560 0 15048985 99.791 16555996 2066 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 22:45:56] CVMFS is ok
[2025-06-02 22:45:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 22:45:56] Checking for apptainer binary...
[2025-06-02 22:45:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 22:45:56] Running /usr/bin/apptainer --version
[2025-06-02 22:45:56] apptainer version 1.3.2-1.el7
[2025-06-02 22:45:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:46:14] cg-vwn279.simple-grid.lan
[2025-06-02 22:46:14] apptainer works
[2025-06-02 22:46:14] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:46:14] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:46:14] Starting ATLAS job with PandaID=6677377673
[2025-06-02 22:46:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:51:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:51:13] 2025-06-03 00:31:30,277 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6677377673/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,278 | INFO     | extracted standard info from prmon json
[2025-06-03 02:51:13] 2025-06-03 00:31:30,278 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:51:13] 2025-06-03 00:31:30,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:51:13] 2025-06-03 00:31:30,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:51:13] 2025-06-03 00:31:30,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:51:13] 2025-06-03 00:31:30,283 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:51:13] 2025-06-03 00:31:30,284 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,286 | INFO     | sum of deviations: -43194552985.99997
[2025-06-03 02:51:13] 2025-06-03 00:31:30,286 | INFO     | mean x: 1748904066.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,286 | INFO     | mean y: 2603868.046948357
[2025-06-03 02:51:13] 2025-06-03 00:31:30,286 | INFO     | -- intersect: 25213443489.939167
[2025-06-03 02:51:13] 2025-06-03 00:31:30,286 | INFO     | intersect: 25213443489.939167
[2025-06-03 02:51:13] 2025-06-03 00:31:30,287 | INFO     | chi2: 1.957565540882787
[2025-06-03 02:51:13] 2025-06-03 00:31:30,287 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,289 | INFO     | sum of deviations: -40094283374.00001
[2025-06-03 02:51:13] 2025-06-03 00:31:30,289 | INFO     | mean x: 1748903913.5
[2025-06-03 02:51:13] 2025-06-03 00:31:30,289 | INFO     | mean y: 2606164.3846153845
[2025-06-03 02:51:13] 2025-06-03 00:31:30,289 | INFO     | -- intersect: 25132463008.271294
[2025-06-03 02:51:13] 2025-06-03 00:31:30,289 | INFO     | intersect: 25132463008.271294
[2025-06-03 02:51:13] 2025-06-03 00:31:30,290 | INFO     | chi2: 1.957728584942635
[2025-06-03 02:51:13] 2025-06-03 00:31:30,290 | INFO     | current chi2=1.957728584942635 (change=-0.008328919591339908 %)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,290 | INFO     | right removable region: 207
[2025-06-03 02:51:13] 2025-06-03 00:31:30,291 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,292 | INFO     | sum of deviations: -82121105887.50005
[2025-06-03 02:51:13] 2025-06-03 00:31:30,292 | INFO     | mean x: 1748904218.5
[2025-06-03 02:51:13] 2025-06-03 00:31:30,293 | INFO     | mean y: 2632429.485576923
[2025-06-03 02:51:13] 2025-06-03 00:31:30,293 | INFO     | -- intersect: 51473610859.54694
[2025-06-03 02:51:13] 2025-06-03 00:31:30,293 | INFO     | intersect: 51473610859.54694
[2025-06-03 02:51:13] 2025-06-03 00:31:30,293 | INFO     | chi2: 0.2450543675607225
[2025-06-03 02:51:13] 2025-06-03 00:31:30,293 | INFO     | current chi2=0.2450543675607225 (change=87.48167749978822 %)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,294 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,295 | INFO     | sum of deviations: -85356001310.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,295 | INFO     | mean x: 1748904371.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,295 | INFO     | mean y: 2634900.9556650245
[2025-06-03 02:51:13] 2025-06-03 00:31:30,296 | INFO     | -- intersect: 57552475601.32031
[2025-06-03 02:51:13] 2025-06-03 00:31:30,296 | INFO     | intersect: 57552475601.32031
[2025-06-03 02:51:13] 2025-06-03 00:31:30,296 | INFO     | chi2: 0.17603579438559963
[2025-06-03 02:51:13] 2025-06-03 00:31:30,296 | INFO     | current chi2=0.17603579438559963 (change=28.164596233127988 %)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,300 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 02:51:13] 2025-06-03 00:31:30,301 | INFO     | sum of deviations: -82574079839.99998
[2025-06-03 02:51:13] 2025-06-03 00:31:30,301 | INFO     | mean x: 1748904523.5
[2025-06-03 02:51:13] 2025-06-03 00:31:30,302 | INFO     | mean y: 2632629.1919191917
[2025-06-03 02:51:13] 2025-06-03 00:31:30,302 | INFO     | -- intersect: 60002035347.271805
[2025-06-03 02:51:13] 2025-06-03 00:31:30,302 | INFO     | intersect: 60002035347.271805
[2025-06-03 02:51:13] 2025-06-03 00:31:30,302 | INFO     | chi2: 0.16760751452442912
[2025-06-03 02:51:13] 2025-06-03 00:31:30,302 | INFO     | current chi2=0.16760751452442912 (change=4.787821641948957 %)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,302 | INFO     | left removable region: 30
[2025-06-03 02:51:13] 2025-06-03 00:31:30,303 | INFO     | sum of square deviations: 1719429448.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,304 | INFO     | sum of deviations: -66897820440.99999
[2025-06-03 02:51:13] 2025-06-03 00:31:30,304 | INFO     | mean x: 1748904798.0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,304 | INFO     | mean y: 2625733.0564971752
[2025-06-03 02:51:13] 2025-06-03 00:31:30,304 | INFO     | -- intersect: 68047243254.93075
[2025-06-03 02:51:13] 2025-06-03 00:31:30,304 | INFO     | intersect: 68047243254.93075
[2025-06-03 02:51:13] 2025-06-03 00:31:30,305 | INFO     | chi2: 0.1493478457117958
[2025-06-03 02:51:13] 2025-06-03 00:31:30,305 | INFO     | -- intersect: 68047243254.93075
[2025-06-03 02:51:13] 2025-06-03 00:31:30,305 | INFO     | current memory leak: -38.91 B/s (using 177 data points, chi2=0.15)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,306 | INFO     | ..............................
[2025-06-03 02:51:13] 2025-06-03 00:31:30,306 | INFO     | . Timing measurements:
[2025-06-03 02:51:13] 2025-06-03 00:31:30,306 | INFO     | . get job = 0 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,306 | INFO     | . initial setup = 6 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,306 | INFO     | . payload setup = 30 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,306 | INFO     | . stage-in = 0 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,307 | INFO     | . payload execution = 13010 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,307 | INFO     | . stage-out = 3 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,307 | INFO     | . log creation = 1 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,307 | INFO     | ..............................
[2025-06-03 02:51:13] 2025-06-03 00:31:30,458 | INFO     | 
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | job summary report
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | --------------------------------------------------
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | PanDA job id: 6677377673
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | task id: 45006595
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | errors: (none)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | pilot state: finished 
[2025-06-03 02:51:13] 2025-06-03 00:31:30,459 | INFO     | transexitcode: 0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | exeerrorcode: 0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | exeerrordiag: 
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | exitcode: 0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | exitmsg: OK
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | cpuconsumptiontime: 48857 s
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | nevents: 400
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | neventsw: 0
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | pid: 20432
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | pgrp: 20432
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | corecount: 8
[2025-06-03 02:51:13] 2025-06-03 00:31:30,460 | INFO     | event service: False
[2025-06-03 02:51:13] 2025-06-03 00:31:30,461 | INFO     | sizes: {0: 2405002, 1: 2405201, 12: 2405201, 23: 2405229, 33: 2405257, 44: 2405313, 55: 2405469, 66: 2405497, 76: 2405525, 87: 2405581, 93: 2405815, 98: 2406123, 1
[2025-06-03 02:51:13] 2025-06-03 00:31:30,461 | INFO     | --------------------------------------------------
[2025-06-03 02:51:13] 2025-06-03 00:31:30,461 | INFO     | 
[2025-06-03 02:51:13] 2025-06-03 00:31:30,461 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-03 02:51:13] 2025-06-03 00:31:30,942 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,942 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,942 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,942 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | job 6677377673 has completed (purged errors)
[2025-06-03 02:51:13] 2025-06-03 00:31:30,944 | INFO     | overall cleanup function is called
[2025-06-03 02:51:13] 2025-06-03 00:31:31,953 | INFO     | --- collectZombieJob: --- 10, [20432]
[2025-06-03 02:51:13] 2025-06-03 00:31:31,953 | INFO     | zombie collector waiting for pid 20432
[2025-06-03 02:51:13] 2025-06-03 00:31:31,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:51:13] 2025-06-03 00:31:31,953 | INFO     | collected zombie processes
[2025-06-03 02:51:13] 2025-06-03 00:31:31,953 | INFO     | will attempt to kill all subprocesses of pid=20432
[2025-06-03 02:51:13] 2025-06-03 00:31:32,063 | INFO     | process IDs to be killed: [20432] (in reverse order)
[2025-06-03 02:51:13] 2025-06-03 00:31:32,503 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:51:13] 2025-06-03 00:31:32,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:51:13] 2025-06-03 00:31:32,507 | INFO     | did not find any defunct processes belonging to 20432
[2025-06-03 02:51:13] 2025-06-03 00:31:32,510 | INFO     | did not find any defunct processes belonging to 20432
[2025-06-03 02:51:13] 2025-06-03 00:31:32,511 | INFO     | ready for new job
[2025-06-03 02:51:13] 2025-06-03 00:31:32,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:51:13] 2025-06-03 00:31:32,513 | INFO     | **************************************
[2025-06-03 02:51:13] 2025-06-03 00:31:32,513 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:51:13] 2025-06-03 00:31:32,513 | INFO     | **************************************
[2025-06-03 02:51:13] 2025-06-03 00:31:32,513 | INFO     | 
[2025-06-03 02:51:13] 2025-06-03 00:31:32,514 | INFO     | pilot is running in a VM
[2025-06-03 02:51:13] 2025-06-03 00:31:32,514 | INFO     | architecture information:
[2025-06-03 02:51:13] 2025-06-03 00:31:32,520 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:51:13] 2025-06-03 00:31:32,557 | INFO     | cat /etc/os-release:
[2025-06-03 02:51:13] NAME="CentOS Linux"
[2025-06-03 02:51:13] VERSION="7 (Core)"
[2025-06-03 02:51:13] ID="centos"
[2025-06-03 02:51:13] ID_LIKE="rhel fedora"
[2025-06-03 02:51:13] VERSION_ID="7"
[2025-06-03 02:51:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:51:13] ANSI_COLOR="0;31"
[2025-06-03 02:51:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:51:13] HOME_URL="https://www.centos.org/"
[2025-06-03 02:51:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:51:13] 
[2025-06-03 02:51:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:51:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:51:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:51:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:51:13] 
[2025-06-03 02:51:13] 2025-06-03 00:31:32,557 | INFO     | **************************************
[2025-06-03 02:51:13] 2025-06-03 00:31:33,061 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-03 02:51:13] 2025-06-03 00:31:33,362 | INFO     | sufficient remaining disk space (496754491392 B)
[2025-06-03 02:51:13] 2025-06-03 00:31:33,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:51:13] 2025-06-03 00:31:33,363 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:51:13] 2025-06-03 00:31:33,363 | INFO     | update_server=False
[2025-06-03 02:51:13] 2025-06-03 00:31:33,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:51:13] 2025-06-03 00:31:33,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:51:13] 2025-06-03 00:31:33,613 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:51:13] 2025-06-03 00:31:33,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:51:13] 2025-06-03 00:31:33,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:51:13] 2025-06-03 00:31:33,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:51:13] 2025-06-03 00:31:33,921 | INFO     | aborting loop
[2025-06-03 02:51:13] 2025-06-03 00:31:34,041 | INFO     | all payload control threads have been joined
[2025-06-03 02:51:13] 2025-06-03 00:31:34,053 | INFO     | all data control threads have been joined
[2025-06-03 02:51:13] 2025-06-03 00:31:34,370 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:34,447 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:34,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:51:13] 2025-06-03 00:31:34,852 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:34,927 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:34,947 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:34,950 | INFO     | all job control threads have been joined
[2025-06-03 02:51:13] 2025-06-03 00:31:35,047 | INFO     | [payload] control thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:35,059 | INFO     | [data] control thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:35,227 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:35,270 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:35,333 | INFO     | [job] validate thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:35,343 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:35,353 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:35,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:51:13] 2025-06-03 00:31:35,957 | INFO     | [job] control thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:36,481 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:36,787 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:37,374 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:51:13] 2025-06-03 00:31:38,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898063914816)>', '<ExcThread(monitor, started 139897478309632)>']
[2025-06-03 02:51:13] 2025-06-03 00:31:38,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:51:13] 2025-06-03 00:31:38,643 | INFO     | [monitor] control thread has ended
[2025-06-03 02:51:13] 2025-06-03 00:31:43,562 | INFO     | all workflow threads have been joined
[2025-06-03 02:51:13] 2025-06-03 00:31:43,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:51:13] 2025-06-03 00:31:43,562 | INFO     | traces error code: 0
[2025-06-03 02:51:13] 2025-06-03 00:31:43,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:51:13] 2025-06-03 00:31:43,924 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:51:13] 2025-06-03 00:31:43,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:51:13] 2025-06-03 00:31:44,055 [wrapper] pilotpid: 9861
[2025-06-03 02:51:13] 2025-06-03 00:31:44,091 [wrapper] Pilot exit status: 0
[2025-06-03 02:51:13] 2025-06-03 00:31:44,155 [wrapper] pandaids: 6677377673
[2025-06-03 02:51:13] 2025-06-03 00:31:44,212 [wrapper] cleanup supervisor_pilot  6364 9862
[2025-06-03 02:51:13] 2025-06-03 00:31:44,226 [wrapper] Test setup, not cleaning
[2025-06-03 02:51:13] 2025-06-03 00:31:44,230 [wrapper] apfmon messages muted
[2025-06-03 02:51:13] 2025-06-03 00:31:44,252 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:51:13] 2025-06-03 00:31:44,331 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:51:13]  *** Error codes and diagnostics ***
[2025-06-03 02:51:13]     "exeErrorCode": 0,
[2025-06-03 02:51:13]     "exeErrorDiag": "",
[2025-06-03 02:51:13]     "pilotErrorCode": 0,
[2025-06-03 02:51:13]     "pilotErrorDiag": "",
[2025-06-03 02:51:13]  *** Listing of results directory ***
[2025-06-03 02:51:13] total 392472
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 02:51:13] -rwx------. 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc       100 Jun  2 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:51:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 22:45 run_atlas
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc       105 Jun  2 22:45 job.xml
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc      6392 Jun  2 22:45 init_data.xml
[2025-06-03 02:51:13] -rw-r--r--. 2 boinc boinc 215241769 Jun  2 22:45 EVNT.45006593._000030.pool.root.1
[2025-06-03 02:51:13] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:45 start_atlas.sh
[2025-06-03 02:51:13] drwxrwx--x. 2 boinc boinc        68 Jun  2 22:45 shared
[2025-06-03 02:51:13] -rw-r--r--. 2 boinc boinc    508872 Jun  2 22:45 input.tar.gz
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc         0 Jun  2 22:45 boinc_lockfile
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc      2519 Jun  2 22:46 pandaJob.out
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc    987975 Jun  2 22:49 agis_schedconf.cvmfs.json
[2025-06-03 02:51:13] drwx------. 4 boinc boinc      4096 Jun  2 22:49 pilot3
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc 179745580 Jun  3 02:28 HITS.45006595._000745.pool.root.1
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:28 boinc_task_state.xml
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc      1030 Jun  3 02:29 memory_monitor_summary.json
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc   1603667 Jun  3 02:29 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc    385051 Jun  3 02:29 log.45006595._000745.job.log.tgz.1
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc        95 Jun  3 02:30 pilot_heartbeat.json
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc      7690 Jun  3 02:31 heartbeat.json
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc      4417 Jun  3 02:31 pilotlog.txt
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc   1152930 Jun  3 02:31 log.45006595._000745.job.log.1
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc       357 Jun  3 02:31 output.list
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:31 runtime_log
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc   1556480 Jun  3 02:31 result.tar.gz
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc      8673 Jun  3 02:31 runtime_log.err
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc       656 Jun  3 02:31 pbeLDmxaMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP2eKDmcpawDo.diag
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc      8192 Jun  3 02:51 boinc_mmap_file
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc        28 Jun  3 02:51 wrapper_checkpoint.txt
[2025-06-03 02:51:13] -rw-r--r--. 1 boinc boinc     20537 Jun  3 02:51 stderr.txt
[2025-06-03 02:51:13] HITS file was successfully produced:
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc 179745580 Jun  3 02:28 shared/HITS.pool.root.1
[2025-06-03 02:51:13]  *** Contents of shared directory: ***
[2025-06-03 02:51:13] total 387772
[2025-06-03 02:51:13] -rw-r--r--. 2 boinc boinc 215241769 Jun  2 22:45 ATLAS.root_0
[2025-06-03 02:51:13] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:45 start_atlas.sh
[2025-06-03 02:51:13] -rw-r--r--. 2 boinc boinc    508872 Jun  2 22:45 input.tar.gz
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc 179745580 Jun  3 02:28 HITS.pool.root.1
[2025-06-03 02:51:13] -rw-------. 1 boinc boinc   1556480 Jun  3 02:31 result.tar.gz
02:51:15 (1599): run_atlas exited; CPU time 49029.846440
02:51:15 (1599): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN