Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:34:22 (2829287): wrapper (7.7.26015): starting
15:34:22 (2829287): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 15:34:22] Arguments: --nthreads 4
[2025-06-04 15:34:22] Threads: 4
[2025-06-04 15:34:22] Checking for CVMFS
[2025-06-04 15:34:22] No cvmfs_config command found, will try listing directly
[2025-06-04 15:34:22] CVMFS is ok
[2025-06-04 15:34:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:34:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:34:22] Further information can be found at the LHC@home message board.
[2025-06-04 15:34:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:34:22] Checking for apptainer binary...
[2025-06-04 15:34:22] which: no apptainer in ((null))
[2025-06-04 15:34:22] apptainer is not installed, using version from CVMFS
[2025-06-04 15:34:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:34:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-04 15:34:22] apptainer works
[2025-06-04 15:34:22] Set ATHENA_PROC_NUMBER=4
[2025-06-04 15:34:22] Set ATHENA_CORE_NUMBER=4
[2025-06-04 15:34:22] Starting ATLAS job with PandaID=6677377638
[2025-06-04 15:34:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:48:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:48:39] 2025-06-04 15:46:24,146 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:48:39] 2025-06-04 15:46:27,059 | WARNING  | process 2866724 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 17:48:39] 2025-06-04 15:46:27,059 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6677377638/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:48:39] 2025-06-04 15:46:27,793 | INFO     | number of running child processes to parent process 2866724: 1
[2025-06-04 17:48:39] 2025-06-04 15:46:27,794 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:48:39] 2025-06-04 15:46:30,298 | INFO     | monitor loop #550: job 0:6677377638 is in state 'finished'
[2025-06-04 17:48:39] 2025-06-04 15:46:30,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,584 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:48:39] 2025-06-04 15:46:30,585 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6677377638/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,586 | INFO     | extracted standard info from prmon json
[2025-06-04 17:48:39] 2025-06-04 15:46:30,586 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:48:39] 2025-06-04 15:46:30,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:48:39] 2025-06-04 15:46:30,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:48:39] 2025-06-04 15:46:30,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:48:39] 2025-06-04 15:46:30,590 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:48:39] 2025-06-04 15:46:30,590 | INFO     | sum of square deviations: 665612480.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,591 | INFO     | sum of deviations: 8893100757.000002
[2025-06-04 17:48:39] 2025-06-04 15:46:30,591 | INFO     | mean x: 1749048016.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,591 | INFO     | mean y: 2327369.7596899224
[2025-06-04 17:48:39] 2025-06-04 15:46:30,591 | INFO     | -- intersect: -23366315350.27908
[2025-06-04 17:48:39] 2025-06-04 15:46:30,591 | INFO     | intersect: -23366315350.27908
[2025-06-04 17:48:39] 2025-06-04 15:46:30,592 | INFO     | chi2: 1.6298560163988727
[2025-06-04 17:48:39] 2025-06-04 15:46:30,592 | INFO     | sum of square deviations: 591173875.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | sum of deviations: 8862395309.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | mean x: 1749047863.5
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | mean y: 2327306.8225806453
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | -- intersect: -26217968000.88003
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | intersect: -26217968000.88003
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | chi2: 1.632377078165327
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | current chi2=1.632377078165327 (change=-0.1546800294681622 %)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,593 | INFO     | right removable region: 123
[2025-06-04 17:48:39] 2025-06-04 15:46:30,594 | INFO     | sum of square deviations: 591173875.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,594 | INFO     | sum of deviations: -10724674953.499998
[2025-06-04 17:48:39] 2025-06-04 15:46:30,594 | INFO     | mean x: 1749048168.5
[2025-06-04 17:48:39] 2025-06-04 15:46:30,594 | INFO     | mean y: 2366883.1370967743
[2025-06-04 17:48:39] 2025-06-04 15:46:30,594 | INFO     | -- intersect: 31732410916.59002
[2025-06-04 17:48:39] 2025-06-04 15:46:30,595 | INFO     | intersect: 31732410916.59002
[2025-06-04 17:48:39] 2025-06-04 15:46:30,595 | INFO     | chi2: 0.022427842822076313
[2025-06-04 17:48:39] 2025-06-04 15:46:30,595 | INFO     | current chi2=0.022427842822076313 (change=98.6239371701293 %)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,595 | INFO     | sum of square deviations: 522502820.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | sum of deviations: -10117615671.999996
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | mean x: 1749048321.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | mean y: 2365533.050420168
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | -- intersect: 33870505620.093163
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | intersect: 33870505620.093163
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | chi2: 0.021098900691746778
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | current chi2=0.021098900691746778 (change=5.925412180173755 %)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,596 | INFO     | left removable region: 20
[2025-06-04 17:48:39] 2025-06-04 15:46:30,597 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,597 | INFO     | sum of deviations: -8063180994.999999
[2025-06-04 17:48:39] 2025-06-04 15:46:30,597 | INFO     | mean x: 1749048443.0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,597 | INFO     | mean y: 2363906.1165048545
[2025-06-04 17:48:39] 2025-06-04 15:46:30,597 | INFO     | -- intersect: 41627827847.52122
[2025-06-04 17:48:39] 2025-06-04 15:46:30,598 | INFO     | intersect: 41627827847.52122
[2025-06-04 17:48:39] 2025-06-04 15:46:30,598 | INFO     | chi2: 0.01768525904140298
[2025-06-04 17:48:39] 2025-06-04 15:46:30,598 | INFO     | -- intersect: 41627827847.52122
[2025-06-04 17:48:39] 2025-06-04 15:46:30,598 | INFO     | current memory leak: -23.80 B/s (using 103 data points, chi2=0.02)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,598 | INFO     | ..............................
[2025-06-04 17:48:39] 2025-06-04 15:46:30,598 | INFO     | . Timing measurements:
[2025-06-04 17:48:39] 2025-06-04 15:46:30,598 | INFO     | . get job = 0 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,599 | INFO     | . initial setup = 1 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,599 | INFO     | . payload setup = 10 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,599 | INFO     | . stage-in = 0 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,599 | INFO     | . payload execution = 7873 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,599 | INFO     | . stage-out = 0 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,599 | INFO     | . log creation = 0 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,599 | INFO     | ..............................
[2025-06-04 17:48:39] 2025-06-04 15:46:30,816 | INFO     | 
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | job summary report
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | --------------------------------------------------
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | PanDA job id: 6677377638
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | task id: 45006595
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | errors: (none)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | pilot state: finished 
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | transexitcode: 0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | exeerrorcode: 0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,817 | INFO     | exeerrordiag: 
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | exitcode: 0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | exitmsg: OK
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | cpuconsumptiontime: 29928 s
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | nevents: 400
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | neventsw: 0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | pid: 2866724
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | pgrp: 2866724
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | corecount: 4
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | event service: False
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | sizes: {0: 2397342, 7: 2397548, 11: 2397576, 7887: 2425285, 7888: 2434250, 7889: 2434306, 7896: 2434604}
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | --------------------------------------------------
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | 
[2025-06-04 17:48:39] 2025-06-04 15:46:30,818 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-06-04 17:48:39] 2025-06-04 15:46:30,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | job 6677377638 has completed (purged errors)
[2025-06-04 17:48:39] 2025-06-04 15:46:30,852 | INFO     | overall cleanup function is called
[2025-06-04 17:48:39] 2025-06-04 15:46:31,861 | INFO     | --- collectZombieJob: --- 10, [2866724]
[2025-06-04 17:48:39] 2025-06-04 15:46:31,861 | INFO     | zombie collector waiting for pid 2866724
[2025-06-04 17:48:39] 2025-06-04 15:46:31,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:48:39] 2025-06-04 15:46:31,861 | INFO     | collected zombie processes
[2025-06-04 17:48:39] 2025-06-04 15:46:31,861 | INFO     | will attempt to kill all subprocesses of pid=2866724
[2025-06-04 17:48:39] 2025-06-04 15:46:32,527 | INFO     | process IDs to be killed: [2866724] (in reverse order)
[2025-06-04 17:48:39] 2025-06-04 15:46:32,774 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:48:39] 2025-06-04 15:46:32,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:48:39] 2025-06-04 15:46:32,804 | INFO     | did not find any defunct processes belonging to 2866724
[2025-06-04 17:48:39] 2025-06-04 15:46:32,828 | INFO     | did not find any defunct processes belonging to 2866724
[2025-06-04 17:48:39] 2025-06-04 15:46:32,828 | INFO     | ready for new job
[2025-06-04 17:48:39] 2025-06-04 15:46:32,829 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:48:39] 2025-06-04 15:46:32,831 | INFO     | **************************************
[2025-06-04 17:48:39] 2025-06-04 15:46:32,833 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:48:39] 2025-06-04 15:46:32,833 | INFO     | **************************************
[2025-06-04 17:48:39] 2025-06-04 15:46:32,833 | INFO     | 
[2025-06-04 17:48:39] 2025-06-04 15:46:32,842 | INFO     | architecture information:
[2025-06-04 17:48:39] 2025-06-04 15:46:32,843 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:48:39] 2025-06-04 15:46:32,869 | INFO     | cat /etc/os-release:
[2025-06-04 17:48:39] NAME="CentOS Linux"
[2025-06-04 17:48:39] VERSION="7 (Core)"
[2025-06-04 17:48:39] ID="centos"
[2025-06-04 17:48:39] ID_LIKE="rhel fedora"
[2025-06-04 17:48:39] VERSION_ID="7"
[2025-06-04 17:48:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:48:39] ANSI_COLOR="0;31"
[2025-06-04 17:48:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:48:39] HOME_URL="https://www.centos.org/"
[2025-06-04 17:48:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:48:39] 
[2025-06-04 17:48:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:48:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:48:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:48:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:48:39] 
[2025-06-04 17:48:39] 2025-06-04 15:46:32,869 | INFO     | **************************************
[2025-06-04 17:48:39] 2025-06-04 15:46:33,372 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-06-04 17:48:39] 2025-06-04 15:46:33,402 | INFO     | sufficient remaining disk space (3234405023744 B)
[2025-06-04 17:48:39] 2025-06-04 15:46:33,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:48:39] 2025-06-04 15:46:33,403 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:48:39] 2025-06-04 15:46:33,403 | INFO     | update_server=False
[2025-06-04 17:48:39] 2025-06-04 15:46:33,403 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:48:39] 2025-06-04 15:46:33,404 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:48:39] 2025-06-04 15:46:33,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:48:39] 2025-06-04 15:46:33,405 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:48:39] 2025-06-04 15:46:33,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:48:39] 2025-06-04 15:46:33,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:48:39] 2025-06-04 15:46:33,613 | INFO     | all job control threads have been joined
[2025-06-04 17:48:39] 2025-06-04 15:46:33,693 | INFO     | all payload control threads have been joined
[2025-06-04 17:48:39] 2025-06-04 15:46:33,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:48:39] 2025-06-04 15:46:33,806 | INFO     | aborting loop
[2025-06-04 17:48:39] 2025-06-04 15:46:34,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:48:39] 2025-06-04 15:46:34,390 | INFO     | all data control threads have been joined
[2025-06-04 17:48:39] 2025-06-04 15:46:34,409 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:34,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:34,618 | INFO     | [job] control thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:34,698 | INFO     | [payload] control thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:34,811 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,017 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,111 | INFO     | [job] validate thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,171 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,250 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,396 | INFO     | [data] control thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,410 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,479 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,658 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:35,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:48:39] 2025-06-04 15:46:35,856 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:36,713 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:38,164 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:48:39] 2025-06-04 15:46:39,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23205157685056)>', '<ExcThread(monitor, started 23204919740160)>']
[2025-06-04 17:48:39] 2025-06-04 15:46:40,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:48:39] 2025-06-04 15:46:40,438 | INFO     | [monitor] control thread has ended
[2025-06-04 17:48:39] 2025-06-04 15:46:44,978 | INFO     | all workflow threads have been joined
[2025-06-04 17:48:39] 2025-06-04 15:46:44,978 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:48:39] 2025-06-04 15:46:44,978 | INFO     | traces error code: 0
[2025-06-04 17:48:39] 2025-06-04 15:46:44,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:48:39] 2025-06-04 15:46:45,207 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:48:39] 2025-06-04 15:46:45,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:48:39] 2025-06-04 15:46:45,215 [wrapper] pilotpid: 2838973
[2025-06-04 17:48:39] 2025-06-04 15:46:45,222 [wrapper] Pilot exit status: 0
[2025-06-04 17:48:39] 2025-06-04 15:46:45,240 [wrapper] pandaids: 6677377638
[2025-06-04 17:48:39] 2025-06-04 15:46:45,402 [wrapper] cleanup supervisor_pilot 3340486 2838974
[2025-06-04 17:48:39] 2025-06-04 15:46:45,407 [wrapper] Test setup, not cleaning
[2025-06-04 17:48:39] 2025-06-04 15:46:45,410 [wrapper] apfmon messages muted
[2025-06-04 17:48:39] 2025-06-04 15:46:45,415 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:48:39] 2025-06-04 15:46:45,419 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:48:39]  *** Error codes and diagnostics ***
[2025-06-04 17:48:39]     "exeErrorCode": 0,
[2025-06-04 17:48:39]     "exeErrorDiag": "",
[2025-06-04 17:48:39]     "pilotErrorCode": 0,
[2025-06-04 17:48:39]     "pilotErrorDiag": "",
[2025-06-04 17:48:39]  *** Listing of results directory ***
[2025-06-04 17:48:39] total 391460
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 17:48:39] -rwx------ 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:48:39] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:34 run_atlas
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:34 job.xml
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc      6687 Jun  4 15:34 init_data.xml
[2025-06-04 17:48:39] -rw-r--r-- 2 boinc boinc 215846435 Jun  4 15:34 EVNT.45006593._000029.pool.root.1
[2025-06-04 17:48:39] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:34 start_atlas.sh
[2025-06-04 17:48:39] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:34 shared
[2025-06-04 17:48:39] -rw-r--r-- 2 boinc boinc    508872 Jun  4 15:34 input.tar.gz
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:34 boinc_lockfile
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc      2519 Jun  4 15:34 pandaJob.out
[2025-06-04 17:48:39] -rw------- 1 boinc boinc    986819 Jun  4 15:34 agis_schedconf.cvmfs.json
[2025-06-04 17:48:39] -rw------- 1 boinc boinc   1598969 Jun  4 15:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:48:39] drwx------ 4 boinc boinc      4096 Jun  4 15:34 pilot3
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc       528 Jun  4 17:45 boinc_task_state.xml
[2025-06-04 17:48:39] -rw------- 1 boinc boinc 179141264 Jun  4 17:45 HITS.45006595._000710.pool.root.1
[2025-06-04 17:48:39] -rw------- 1 boinc boinc        95 Jun  4 17:46 pilot_heartbeat.json
[2025-06-04 17:48:39] -rw------- 1 boinc boinc      1030 Jun  4 17:46 memory_monitor_summary.json
[2025-06-04 17:48:39] -rw------- 1 boinc boinc    271438 Jun  4 17:46 log.45006595._000710.job.log.tgz.1
[2025-06-04 17:48:39] -rw------- 1 boinc boinc      7700 Jun  4 17:46 heartbeat.json
[2025-06-04 17:48:39] -rw------- 1 boinc boinc      4488 Jun  4 17:46 pilotlog.txt
[2025-06-04 17:48:39] -rw------- 1 boinc boinc    747861 Jun  4 17:46 log.45006595._000710.job.log.1
[2025-06-04 17:48:39] -rw------- 1 boinc boinc       357 Jun  4 17:46 output.list
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:46 runtime_log
[2025-06-04 17:48:39] -rw------- 1 boinc boinc   1034240 Jun  4 17:46 result.tar.gz
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc      9040 Jun  4 17:46 runtime_log.err
[2025-06-04 17:48:39] -rw------- 1 boinc boinc       663 Jun  4 17:46 aO2KDmxaMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr1eKDmGejhim.diag
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc        26 Jun  4 17:48 wrapper_checkpoint.txt
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:48 boinc_mmap_file
[2025-06-04 17:48:39] -rw-r--r-- 1 boinc boinc     21014 Jun  4 17:48 stderr.txt
[2025-06-04 17:48:39] HITS file was successfully produced:
[2025-06-04 17:48:39] -rw------- 1 boinc boinc 179141264 Jun  4 17:45 shared/HITS.pool.root.1
[2025-06-04 17:48:39]  *** Contents of shared directory: ***
[2025-06-04 17:48:39] total 387268
[2025-06-04 17:48:39] -rw-r--r-- 2 boinc boinc 215846435 Jun  4 15:34 ATLAS.root_0
[2025-06-04 17:48:39] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:34 start_atlas.sh
[2025-06-04 17:48:39] -rw-r--r-- 2 boinc boinc    508872 Jun  4 15:34 input.tar.gz
[2025-06-04 17:48:39] -rw------- 1 boinc boinc 179141264 Jun  4 17:45 HITS.pool.root.1
[2025-06-04 17:48:39] -rw------- 1 boinc boinc   1034240 Jun  4 17:46 result.tar.gz
17:48:40 (2829287): run_atlas exited; CPU time 30340.428973
17:48:40 (2829287): called boinc_finish(0)

</stderr_txt>
]]>

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