Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:12:48 (31030): wrapper (7.7.26015): starting
18:12:48 (31030): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 18:12:48] Arguments: --nthreads 8
[2025-06-02 18:12:48] Threads: 8
[2025-06-02 18:12:48] Checking for CVMFS
[2025-06-02 18:12:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 18:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 18:12:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 18:12:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 18:12:50] 2.11.2.0 18345 30648 97412 146710 3 170 14158367 25165824 4632 130560 0 15556082 99.834 17632590 1920 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 18:12:50] CVMFS is ok
[2025-06-02 18:12:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 18:12:50] Checking for apptainer binary...
[2025-06-02 18:12:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 18:12:50] Running /usr/bin/apptainer --version
[2025-06-02 18:12:50] apptainer version 1.3.2-1.el7
[2025-06-02 18:12:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 18:25:54] cg-vwn239.simple-grid.lan
[2025-06-02 18:25:54] apptainer works
[2025-06-02 18:25:54] Set ATHENA_PROC_NUMBER=8
[2025-06-02 18:25:54] Set ATHENA_CORE_NUMBER=8
[2025-06-02 18:25:54] Starting ATLAS job with PandaID=6665989662
[2025-06-02 18:25:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 00:54:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 00:54:29] 2025-06-02 21:42:41,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:54:29] 2025-06-02 21:42:41,751 | INFO     | fitting pss+swap vs Time
[2025-06-03 00:54:29] 2025-06-02 21:42:41,752 | INFO     | sum of square deviations: 9148487810.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,755 | INFO     | sum of deviations: 47604283978.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,756 | INFO     | mean x: 1748891032.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,756 | INFO     | mean y: 2480924.5501618125
[2025-06-03 00:54:29] 2025-06-02 21:42:41,756 | INFO     | -- intersect: -9097897964.614635
[2025-06-03 00:54:29] 2025-06-02 21:42:41,756 | INFO     | intersect: -9097897964.614635
[2025-06-03 00:54:29] 2025-06-02 21:42:41,757 | INFO     | chi2: 2.3589109525507035
[2025-06-03 00:54:29] 2025-06-02 21:42:41,757 | INFO     | sum of square deviations: 8711530780.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,760 | INFO     | sum of deviations: 67170189711.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,764 | INFO     | mean x: 1748890879.5
[2025-06-03 00:54:29] 2025-06-02 21:42:41,764 | INFO     | mean y: 2487659.0460526315
[2025-06-03 00:54:29] 2025-06-02 21:42:41,764 | INFO     | -- intersect: -13482321742.023714
[2025-06-03 00:54:29] 2025-06-02 21:42:41,764 | INFO     | intersect: -13482321742.023714
[2025-06-03 00:54:29] 2025-06-02 21:42:41,765 | INFO     | chi2: 1.58350948120256
[2025-06-03 00:54:29] 2025-06-02 21:42:41,765 | INFO     | current chi2=1.58350948120256 (change=32.87116330142507 %)
[2025-06-03 00:54:29] 2025-06-02 21:42:41,765 | INFO     | sum of square deviations: 8288713550.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,768 | INFO     | sum of deviations: 65850600806.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,769 | INFO     | mean x: 1748890727.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,769 | INFO     | mean y: 2487183.060200669
[2025-06-03 00:54:29] 2025-06-02 21:42:41,769 | INFO     | -- intersect: -13891768472.20878
[2025-06-03 00:54:29] 2025-06-02 21:42:41,769 | INFO     | intersect: -13891768472.20878
[2025-06-03 00:54:29] 2025-06-02 21:42:41,769 | INFO     | chi2: 1.5836983764388013
[2025-06-03 00:54:29] 2025-06-02 21:42:41,770 | INFO     | current chi2=1.5836983764388013 (change=-0.01192889834153461 %)
[2025-06-03 00:54:29] 2025-06-02 21:42:41,770 | INFO     | right removable region: 298
[2025-06-03 00:54:29] 2025-06-02 21:42:41,770 | INFO     | sum of square deviations: 8711530780.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,773 | INFO     | sum of deviations: -2051785782.5
[2025-06-03 00:54:29] 2025-06-02 21:42:41,774 | INFO     | mean x: 1748891184.5
[2025-06-03 00:54:29] 2025-06-02 21:42:41,774 | INFO     | mean y: 2498137.0361842103
[2025-06-03 00:54:29] 2025-06-02 21:42:41,774 | INFO     | -- intersect: 414406234.26002073
[2025-06-03 00:54:29] 2025-06-02 21:42:41,774 | INFO     | intersect: 414406234.26002073
[2025-06-03 00:54:29] 2025-06-02 21:42:41,774 | INFO     | chi2: 0.8709163223266954
[2025-06-03 00:54:29] 2025-06-02 21:42:41,774 | INFO     | current chi2=0.8709163223266954 (change=63.079728745802434 %)
[2025-06-03 00:54:29] 2025-06-02 21:42:41,775 | INFO     | sum of square deviations: 8288713550.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,778 | INFO     | sum of deviations: -14516130716.000002
[2025-06-03 00:54:29] 2025-06-02 21:42:41,778 | INFO     | mean x: 1748891337.0
[2025-06-03 00:54:29] 2025-06-02 21:42:41,778 | INFO     | mean y: 2502633.4882943146
[2025-06-03 00:54:29] 2025-06-02 21:42:41,778 | INFO     | -- intersect: 3065358540.237781
[2025-06-03 00:54:29] 2025-06-02 21:42:41,778 | INFO     | intersect: 3065358540.237781
[2025-06-03 00:54:29] 2025-06-02 21:42:41,779 | INFO     | chi2: 0.7971377985554464
[2025-06-03 00:54:29] 2025-06-02 21:42:41,779 | INFO     | current chi2=0.7971377985554464 (change=8.471367671023323 %)
[2025-06-03 00:54:29] 2025-06-02 21:42:41,779 | INFO     | left removable region: 20
[2025-06-03 00:54:29] 2025-06-02 21:42:41,780 | INFO     | sum of square deviations: 6662039329.5
[2025-06-03 00:54:29] 2025-06-02 21:42:41,782 | INFO     | sum of deviations: 2555592499.000002
[2025-06-03 00:54:29] 2025-06-02 21:42:41,782 | INFO     | mean x: 1748891306.5
[2025-06-03 00:54:29] 2025-06-02 21:42:41,782 | INFO     | mean y: 2510862.2086330936
[2025-06-03 00:54:29] 2025-06-02 21:42:41,783 | INFO     | -- intersect: -668372824.2125269
[2025-06-03 00:54:29] 2025-06-02 21:42:41,783 | INFO     | intersect: -668372824.2125269
[2025-06-03 00:54:29] 2025-06-02 21:42:41,783 | INFO     | chi2: 0.006924588819908875
[2025-06-03 00:54:29] 2025-06-02 21:42:41,783 | INFO     | -- intersect: -668372824.2125269
[2025-06-03 00:54:29] 2025-06-02 21:42:41,783 | INFO     | current memory leak: 0.38 B/s (using 278 data points, chi2=0.01)
[2025-06-03 00:54:29] 2025-06-02 21:42:41,784 | INFO     | ..............................
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . Timing measurements:
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . get job = 0 s
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . initial setup = 2 s
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . payload setup = 14 s
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . stage-in = 0 s
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . payload execution = 18841 s
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . stage-out = 4 s
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | . log creation = 1 s
[2025-06-03 00:54:29] 2025-06-02 21:42:41,785 | INFO     | ..............................
[2025-06-03 00:54:29] 2025-06-02 21:42:41,853 | INFO     | PID=7539 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 00:54:29] 2025-06-02 21:42:41,853 | INFO     | .. there are 9 such processes running
[2025-06-03 00:54:29] 2025-06-02 21:42:42,332 | INFO     | 
[2025-06-03 00:54:29] 2025-06-02 21:42:42,332 | INFO     | job summary report
[2025-06-03 00:54:29] 2025-06-02 21:42:42,332 | INFO     | --------------------------------------------------
[2025-06-03 00:54:29] 2025-06-02 21:42:42,332 | INFO     | PanDA job id: 6665989662
[2025-06-03 00:54:29] 2025-06-02 21:42:42,332 | INFO     | task id: 44871837
[2025-06-03 00:54:29] 2025-06-02 21:42:42,332 | INFO     | errors: (none)
[2025-06-03 00:54:29] 2025-06-02 21:42:42,332 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | pilot state: finished 
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | transexitcode: 0
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | exeerrorcode: 0
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | exeerrordiag: 
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | exitcode: 0
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | exitmsg: OK
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | cpuconsumptiontime: 71692 s
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | nevents: 400
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | neventsw: 0
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | pid: 16100
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | pgrp: 16100
[2025-06-03 00:54:29] 2025-06-02 21:42:42,333 | INFO     | corecount: 8
[2025-06-03 00:54:29] 2025-06-02 21:42:42,334 | INFO     | event service: False
[2025-06-03 00:54:29] 2025-06-02 21:42:42,334 | INFO     | sizes: {0: 2405234, 1: 2405234, 11: 2405468, 12: 2405496, 18860: 2437231, 18864: 2446172, 18867: 2446356, 18959: 2446526}
[2025-06-03 00:54:29] 2025-06-02 21:42:42,334 | INFO     | --------------------------------------------------
[2025-06-03 00:54:29] 2025-06-02 21:42:42,334 | INFO     | 
[2025-06-03 00:54:29] 2025-06-02 21:42:42,334 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 00:54:29] 2025-06-02 21:42:42,813 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 00:54:29] 2025-06-02 21:42:42,815 | INFO     | job 6665989662 has completed (purged errors)
[2025-06-03 00:54:29] 2025-06-02 21:42:42,816 | INFO     | overall cleanup function is called
[2025-06-03 00:54:29] 2025-06-02 21:42:43,825 | INFO     | --- collectZombieJob: --- 10, [16100]
[2025-06-03 00:54:29] 2025-06-02 21:42:43,825 | INFO     | zombie collector waiting for pid 16100
[2025-06-03 00:54:29] 2025-06-02 21:42:43,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 00:54:29] 2025-06-02 21:42:43,825 | INFO     | collected zombie processes
[2025-06-03 00:54:29] 2025-06-02 21:42:43,825 | INFO     | will attempt to kill all subprocesses of pid=16100
[2025-06-03 00:54:29] 2025-06-02 21:42:43,928 | INFO     | process IDs to be killed: [16100] (in reverse order)
[2025-06-03 00:54:29] 2025-06-02 21:42:44,512 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 00:54:29] 2025-06-02 21:42:44,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 00:54:29] 2025-06-02 21:42:44,515 | INFO     | did not find any defunct processes belonging to 16100
[2025-06-03 00:54:29] 2025-06-02 21:42:44,518 | INFO     | did not find any defunct processes belonging to 16100
[2025-06-03 00:54:29] 2025-06-02 21:42:44,518 | INFO     | ready for new job
[2025-06-03 00:54:29] 2025-06-02 21:42:44,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 00:54:29] 2025-06-02 21:42:44,521 | INFO     | **************************************
[2025-06-03 00:54:29] 2025-06-02 21:42:44,521 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 00:54:29] 2025-06-02 21:42:44,521 | INFO     | **************************************
[2025-06-03 00:54:29] 2025-06-02 21:42:44,521 | INFO     | 
[2025-06-03 00:54:29] 2025-06-02 21:42:44,522 | INFO     | pilot is running in a VM
[2025-06-03 00:54:29] 2025-06-02 21:42:44,522 | INFO     | architecture information:
[2025-06-03 00:54:29] 2025-06-02 21:42:44,536 | INFO     | executing command: cat /etc/os-release
[2025-06-03 00:54:29] 2025-06-02 21:42:44,763 | INFO     | cat /etc/os-release:
[2025-06-03 00:54:29] NAME="CentOS Linux"
[2025-06-03 00:54:29] VERSION="7 (Core)"
[2025-06-03 00:54:29] ID="centos"
[2025-06-03 00:54:29] ID_LIKE="rhel fedora"
[2025-06-03 00:54:29] VERSION_ID="7"
[2025-06-03 00:54:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 00:54:29] ANSI_COLOR="0;31"
[2025-06-03 00:54:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 00:54:29] HOME_URL="https://www.centos.org/"
[2025-06-03 00:54:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 00:54:29] 
[2025-06-03 00:54:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 00:54:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 00:54:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 00:54:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 00:54:29] 
[2025-06-03 00:54:29] 2025-06-02 21:42:44,763 | INFO     | **************************************
[2025-06-03 00:54:29] 2025-06-02 21:42:44,867 | INFO     | 18987s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 00:54:29] 2025-06-02 21:42:45,267 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 00:54:29] 2025-06-02 21:42:45,487 | INFO     | sufficient remaining disk space (496995663872 B)
[2025-06-03 00:54:29] 2025-06-02 21:42:45,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 00:54:29] 2025-06-02 21:42:45,487 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 00:54:29] 2025-06-02 21:42:45,487 | INFO     | update_server=False
[2025-06-03 00:54:29] 2025-06-02 21:42:45,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 00:54:29] 2025-06-02 21:42:45,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 00:54:29] 2025-06-02 21:42:45,729 | INFO     | all job control threads have been joined
[2025-06-03 00:54:29] 2025-06-02 21:42:45,873 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 00:54:29] 2025-06-02 21:42:45,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 00:54:29] 2025-06-02 21:42:45,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 00:54:29] 2025-06-02 21:42:45,975 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 00:54:29] 2025-06-02 21:42:45,975 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 00:54:29] 2025-06-02 21:42:45,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:54:29] 2025-06-02 21:42:45,975 | INFO     | will abort loop
[2025-06-03 00:54:29] 2025-06-02 21:42:45,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 00:54:29] 2025-06-02 21:42:46,337 | INFO     | all data control threads have been joined
[2025-06-03 00:54:29] 2025-06-02 21:42:46,390 | INFO     | all payload control threads have been joined
[2025-06-03 00:54:29] 2025-06-02 21:42:46,494 | INFO     | [job] retrieve thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:46,515 | INFO     | [payload] validate_post thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:46,612 | INFO     | [payload] failed_post thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:46,734 | INFO     | [job] control thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:46,924 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:46,951 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:46,981 | INFO     | [job] job monitor thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:46,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:54:29] 2025-06-02 21:42:47,077 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:47,279 | INFO     | [data] copytool_in thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:47,343 | INFO     | [data] control thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:47,396 | INFO     | [payload] control thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:47,462 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:47,496 | INFO     | [data] copytool_out thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:47,579 | INFO     | [job] validate thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:47,997 | INFO     | [job] queue monitor thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:49,992 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 00:54:29] 2025-06-02 21:42:51,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585897396032)>', '<ExcThread(monitor, started 140585075730176)>']
[2025-06-03 00:54:29] 2025-06-02 21:42:51,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 00:54:29] 2025-06-02 21:42:51,909 | INFO     | [monitor] control thread has ended
[2025-06-03 00:54:29] 2025-06-02 21:42:56,271 | INFO     | all workflow threads have been joined
[2025-06-03 00:54:29] 2025-06-02 21:42:56,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 00:54:29] 2025-06-02 21:42:56,271 | INFO     | traces error code: 0
[2025-06-03 00:54:29] 2025-06-02 21:42:56,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 00:54:29] 2025-06-02 21:42:56,491 [wrapper] ==== pilot stdout END ====
[2025-06-03 00:54:29] 2025-06-02 21:42:56,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 00:54:29] 2025-06-02 21:42:56,557 [wrapper] pilotpid: 7539
[2025-06-03 00:54:29] 2025-06-02 21:42:56,601 [wrapper] Pilot exit status: 0
[2025-06-03 00:54:29] 2025-06-02 21:42:57,070 [wrapper] pandaids: 6665989662
[2025-06-03 00:54:29] 2025-06-02 21:42:58,240 [wrapper] cleanup supervisor_pilot 11616 7540
[2025-06-03 00:54:29] 2025-06-02 21:42:58,292 [wrapper] Test setup, not cleaning
[2025-06-03 00:54:29] 2025-06-02 21:42:58,310 [wrapper] apfmon messages muted
[2025-06-03 00:54:29] 2025-06-02 21:42:58,372 [wrapper] ==== wrapper stdout END ====
[2025-06-03 00:54:29] 2025-06-02 21:42:58,443 [wrapper] ==== wrapper stderr END ====
[2025-06-03 00:54:29]  *** Error codes and diagnostics ***
[2025-06-03 00:54:29]     "exeErrorCode": 0,
[2025-06-03 00:54:29]     "exeErrorDiag": "",
[2025-06-03 00:54:29]     "pilotErrorCode": 0,
[2025-06-03 00:54:29]     "pilotErrorDiag": "",
[2025-06-03 00:54:29]  *** Listing of results directory ***
[2025-06-03 00:54:29] total 423348
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc    495897 May 26 15:12 pilot3.tar.gz
[2025-06-03 00:54:29] -rwx------. 1 boinc boinc     37140 May 26 15:21 runpilot2-wrapper.sh
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc      5111 May 26 15:21 queuedata.json
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc       100 Jun  2 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 00:54:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 18:12 run_atlas
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc       105 Jun  2 18:12 job.xml
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc      6392 Jun  2 18:12 init_data.xml
[2025-06-03 00:54:29] -rw-r--r--. 2 boinc boinc 222925574 Jun  2 18:12 EVNT.44871834._002041.pool.root.1
[2025-06-03 00:54:29] drwxrwx--x. 2 boinc boinc        68 Jun  2 18:12 shared
[2025-06-03 00:54:29] -rw-r--r--. 2 boinc boinc    508876 Jun  2 18:12 input.tar.gz
[2025-06-03 00:54:29] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:12 start_atlas.sh
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc         0 Jun  2 18:12 boinc_lockfile
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc      2559 Jun  2 18:25 pandaJob.out
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc    988242 Jun  2 18:26 agis_schedconf.cvmfs.json
[2025-06-03 00:54:29] drwx------. 4 boinc boinc      4096 Jun  2 18:26 pilot3
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc 202656233 Jun  2 23:39 HITS.44871837._051289.pool.root.1
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc       530 Jun  2 23:39 boinc_task_state.xml
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc      1019 Jun  2 23:40 memory_monitor_summary.json
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc   1603667 Jun  2 23:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc    429531 Jun  2 23:41 log.44871837._051289.job.log.tgz.1
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc        95 Jun  2 23:41 pilot_heartbeat.json
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc      7690 Jun  2 23:42 heartbeat.json
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc      4718 Jun  2 23:42 pilotlog.txt
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc   1622278 Jun  2 23:42 log.44871837._051289.job.log.1
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc       357 Jun  2 23:43 output.list
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:43 runtime_log
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc   2068480 Jun  2 23:43 result.tar.gz
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc       657 Jun  2 23:43 r4xLDmzwmd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPrWKDmTqONWo.diag
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc      8659 Jun  2 23:43 runtime_log.err
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc      8192 Jun  3 00:54 boinc_mmap_file
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc        28 Jun  3 00:54 wrapper_checkpoint.txt
[2025-06-03 00:54:29] -rw-r--r--. 1 boinc boinc     20600 Jun  3 00:54 stderr.txt
[2025-06-03 00:54:29] HITS file was successfully produced:
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc 202656233 Jun  2 23:39 shared/HITS.pool.root.1
[2025-06-03 00:54:29]  *** Contents of shared directory: ***
[2025-06-03 00:54:29] total 418148
[2025-06-03 00:54:29] -rw-r--r--. 2 boinc boinc 222925574 Jun  2 18:12 ATLAS.root_0
[2025-06-03 00:54:29] -rw-r--r--. 2 boinc boinc    508876 Jun  2 18:12 input.tar.gz
[2025-06-03 00:54:29] -rw-r--r--. 2 boinc boinc     15093 Jun  2 18:12 start_atlas.sh
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc 202656233 Jun  2 23:39 HITS.pool.root.1
[2025-06-03 00:54:29] -rw-------. 1 boinc boinc   2068480 Jun  2 23:43 result.tar.gz
00:54:31 (31030): run_atlas exited; CPU time 71926.983181
00:54:31 (31030): called boinc_finish(0)

</stderr_txt>
]]>

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