Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:54:36 (21814): wrapper (7.7.26015): starting
00:54:36 (21814): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:54:36] Arguments: --nthreads 8
[2025-06-03 00:54:36] Threads: 8
[2025-06-03 00:54:36] Checking for CVMFS
[2025-06-03 00:54:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:54:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:54:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:33:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:33:08] 2.11.2.0 18345 31050 97124 146722 2 16 14546279 25165825 4634 130560 0 15757722 99.836 17806306 1928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 04:33:08] CVMFS is ok
[2025-06-03 04:33:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:33:09] Checking for apptainer binary...
[2025-06-03 04:33:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:33:09] Running /usr/bin/apptainer --version
[2025-06-03 04:33:09] apptainer version 1.3.2-1.el7
[2025-06-03 04:33:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:33:10] cg-vwn239.simple-grid.lan
[2025-06-03 04:33:10] apptainer works
[2025-06-03 04:33:10] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:33:10] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:33:10] Starting ATLAS job with PandaID=6677379097
[2025-06-03 04:33:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:35:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:35:32] 2025-06-03 06:13:14,209 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6677379097/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,210 | INFO     | extracted standard info from prmon json
[2025-06-03 08:35:32] 2025-06-03 06:13:14,210 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:35:32] 2025-06-03 06:13:14,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:35:32] 2025-06-03 06:13:14,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:35:32] 2025-06-03 06:13:14,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:35:32] 2025-06-03 06:13:14,215 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:35:32] 2025-06-03 06:13:14,216 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 08:35:32] 2025-06-03 06:13:14,218 | INFO     | sum of deviations: -59582603359.50001
[2025-06-03 08:35:32] 2025-06-03 06:13:14,218 | INFO     | mean x: 1748924589.5
[2025-06-03 08:35:32] 2025-06-03 06:13:14,218 | INFO     | mean y: 2576721.2196261683
[2025-06-03 08:35:32] 2025-06-03 06:13:14,218 | INFO     | -- intersect: 34293588405.350418
[2025-06-03 08:35:32] 2025-06-03 06:13:14,218 | INFO     | intersect: 34293588405.350418
[2025-06-03 08:35:32] 2025-06-03 06:13:14,219 | INFO     | chi2: 2.919551876111942
[2025-06-03 08:35:32] 2025-06-03 06:13:14,219 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,221 | INFO     | sum of deviations: -42423917781.99993
[2025-06-03 08:35:32] 2025-06-03 06:13:14,221 | INFO     | mean x: 1748924437.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,221 | INFO     | mean y: 2589101.866028708
[2025-06-03 08:35:32] 2025-06-03 06:13:14,221 | INFO     | -- intersect: 26213039185.24794
[2025-06-03 08:35:32] 2025-06-03 06:13:14,221 | INFO     | intersect: 26213039185.24794
[2025-06-03 08:35:32] 2025-06-03 06:13:14,222 | INFO     | chi2: 2.158501535483588
[2025-06-03 08:35:32] 2025-06-03 06:13:14,222 | INFO     | current chi2=2.158501535483588 (change=26.067368312765467 %)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,222 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,224 | INFO     | sum of deviations: -39641293439.5
[2025-06-03 08:35:32] 2025-06-03 06:13:14,224 | INFO     | mean x: 1748924284.5
[2025-06-03 08:35:32] 2025-06-03 06:13:14,224 | INFO     | mean y: 2591241.6911764704
[2025-06-03 08:35:32] 2025-06-03 06:13:14,224 | INFO     | -- intersect: 26339229234.13051
[2025-06-03 08:35:32] 2025-06-03 06:13:14,225 | INFO     | intersect: 26339229234.13051
[2025-06-03 08:35:32] 2025-06-03 06:13:14,225 | INFO     | chi2: 2.158027527366071
[2025-06-03 08:35:32] 2025-06-03 06:13:14,225 | INFO     | current chi2=2.158027527366071 (change=0.021960054682600455 %)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,225 | INFO     | right removable region: 203
[2025-06-03 08:35:32] 2025-06-03 06:13:14,226 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,227 | INFO     | sum of deviations: -101258423027.99997
[2025-06-03 08:35:32] 2025-06-03 06:13:14,228 | INFO     | mean x: 1748924742.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,228 | INFO     | mean y: 2607014.100478469
[2025-06-03 08:35:32] 2025-06-03 06:13:14,228 | INFO     | -- intersect: 62562347931.45683
[2025-06-03 08:35:32] 2025-06-03 06:13:14,228 | INFO     | intersect: 62562347931.45683
[2025-06-03 08:35:32] 2025-06-03 06:13:14,228 | INFO     | chi2: 0.997230495216224
[2025-06-03 08:35:32] 2025-06-03 06:13:14,228 | INFO     | current chi2=0.997230495216224 (change=65.84302874096325 %)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,229 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,230 | INFO     | sum of deviations: -100035173863.00005
[2025-06-03 08:35:32] 2025-06-03 06:13:14,230 | INFO     | mean x: 1748924894.5
[2025-06-03 08:35:32] 2025-06-03 06:13:14,231 | INFO     | mean y: 2606043.9509803923
[2025-06-03 08:35:32] 2025-06-03 06:13:14,231 | INFO     | -- intersect: 66463380929.340164
[2025-06-03 08:35:32] 2025-06-03 06:13:14,231 | INFO     | intersect: 66463380929.340164
[2025-06-03 08:35:32] 2025-06-03 06:13:14,231 | INFO     | chi2: 0.9707213600508321
[2025-06-03 08:35:32] 2025-06-03 06:13:14,231 | INFO     | current chi2=0.9707213600508321 (change=2.6582756235953307 %)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,231 | INFO     | left removable region: 20
[2025-06-03 08:35:32] 2025-06-03 06:13:14,232 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,233 | INFO     | sum of deviations: -71396744901.00003
[2025-06-03 08:35:32] 2025-06-03 06:13:14,233 | INFO     | mean x: 1748924864.0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,233 | INFO     | mean y: 2616884.12568306
[2025-06-03 08:35:32] 2025-06-03 06:13:14,233 | INFO     | -- intersect: 65712521890.11043
[2025-06-03 08:35:32] 2025-06-03 06:13:14,234 | INFO     | intersect: 65712521890.11043
[2025-06-03 08:35:32] 2025-06-03 06:13:14,234 | INFO     | chi2: 0.1622632775719484
[2025-06-03 08:35:32] 2025-06-03 06:13:14,234 | INFO     | -- intersect: 65712521890.11043
[2025-06-03 08:35:32] 2025-06-03 06:13:14,234 | INFO     | current memory leak: -37.57 B/s (using 183 data points, chi2=0.16)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,235 | INFO     | ..............................
[2025-06-03 08:35:32] 2025-06-03 06:13:14,235 | INFO     | . Timing measurements:
[2025-06-03 08:35:32] 2025-06-03 06:13:14,235 | INFO     | . get job = 0 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,235 | INFO     | . initial setup = 2 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,236 | INFO     | . payload setup = 17 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,236 | INFO     | . stage-in = 0 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,236 | INFO     | . payload execution = 13018 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,236 | INFO     | . stage-out = 6 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,236 | INFO     | . log creation = 1 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,236 | INFO     | ..............................
[2025-06-03 08:35:32] 2025-06-03 06:13:14,367 | INFO     | 
[2025-06-03 08:35:32] 2025-06-03 06:13:14,367 | INFO     | job summary report
[2025-06-03 08:35:32] 2025-06-03 06:13:14,367 | INFO     | --------------------------------------------------
[2025-06-03 08:35:32] 2025-06-03 06:13:14,367 | INFO     | PanDA job id: 6677379097
[2025-06-03 08:35:32] 2025-06-03 06:13:14,367 | INFO     | task id: 45006595
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | errors: (none)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | pilot state: finished 
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | transexitcode: 0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | exeerrorcode: 0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | exeerrordiag: 
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | exitcode: 0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | exitmsg: OK
[2025-06-03 08:35:32] 2025-06-03 06:13:14,368 | INFO     | cpuconsumptiontime: 49076 s
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | nevents: 400
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | neventsw: 0
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | pid: 25380
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | pgrp: 25380
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | corecount: 8
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | event service: False
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | sizes: {0: 2405005, 1: 2405204, 12: 2405204, 14: 2405438, 23: 2405466, 13040: 2434914, 13041: 2435041, 13047: 2444038, 13050: 2444094, 13143: 2444264}
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | --------------------------------------------------
[2025-06-03 08:35:32] 2025-06-03 06:13:14,369 | INFO     | 
[2025-06-03 08:35:32] 2025-06-03 06:13:14,370 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 08:35:32] 2025-06-03 06:13:14,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:35:32] 2025-06-03 06:13:14,780 | INFO     | job 6677379097 has completed (purged errors)
[2025-06-03 08:35:32] 2025-06-03 06:13:14,780 | INFO     | overall cleanup function is called
[2025-06-03 08:35:32] 2025-06-03 06:13:15,791 | INFO     | --- collectZombieJob: --- 10, [25380]
[2025-06-03 08:35:32] 2025-06-03 06:13:15,791 | INFO     | zombie collector waiting for pid 25380
[2025-06-03 08:35:32] 2025-06-03 06:13:15,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:35:32] 2025-06-03 06:13:15,791 | INFO     | collected zombie processes
[2025-06-03 08:35:32] 2025-06-03 06:13:15,791 | INFO     | will attempt to kill all subprocesses of pid=25380
[2025-06-03 08:35:32] 2025-06-03 06:13:15,910 | INFO     | process IDs to be killed: [25380] (in reverse order)
[2025-06-03 08:35:32] 2025-06-03 06:13:16,765 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:35:32] 2025-06-03 06:13:16,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:35:32] 2025-06-03 06:13:16,769 | INFO     | did not find any defunct processes belonging to 25380
[2025-06-03 08:35:32] 2025-06-03 06:13:16,772 | INFO     | did not find any defunct processes belonging to 25380
[2025-06-03 08:35:32] 2025-06-03 06:13:16,772 | INFO     | ready for new job
[2025-06-03 08:35:32] 2025-06-03 06:13:16,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:35:32] 2025-06-03 06:13:16,775 | INFO     | **************************************
[2025-06-03 08:35:32] 2025-06-03 06:13:16,775 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:35:32] 2025-06-03 06:13:16,775 | INFO     | **************************************
[2025-06-03 08:35:32] 2025-06-03 06:13:16,775 | INFO     | 
[2025-06-03 08:35:32] 2025-06-03 06:13:16,776 | INFO     | pilot is running in a VM
[2025-06-03 08:35:32] 2025-06-03 06:13:16,776 | INFO     | architecture information:
[2025-06-03 08:35:32] 2025-06-03 06:13:16,779 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:35:32] 2025-06-03 06:13:16,966 | INFO     | cat /etc/os-release:
[2025-06-03 08:35:32] NAME="CentOS Linux"
[2025-06-03 08:35:32] VERSION="7 (Core)"
[2025-06-03 08:35:32] ID="centos"
[2025-06-03 08:35:32] ID_LIKE="rhel fedora"
[2025-06-03 08:35:32] VERSION_ID="7"
[2025-06-03 08:35:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:35:32] ANSI_COLOR="0;31"
[2025-06-03 08:35:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:35:32] HOME_URL="https://www.centos.org/"
[2025-06-03 08:35:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:35:32] 
[2025-06-03 08:35:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:35:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:35:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:35:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:35:32] 
[2025-06-03 08:35:32] 2025-06-03 06:13:16,967 | INFO     | **************************************
[2025-06-03 08:35:32] 2025-06-03 06:13:17,471 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 08:35:32] 2025-06-03 06:13:17,656 | INFO     | sufficient remaining disk space (496818454528 B)
[2025-06-03 08:35:32] 2025-06-03 06:13:17,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:35:32] 2025-06-03 06:13:17,656 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:35:32] 2025-06-03 06:13:17,657 | INFO     | update_server=False
[2025-06-03 08:35:32] 2025-06-03 06:13:17,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:35:32] 2025-06-03 06:13:17,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:35:32] 2025-06-03 06:13:17,658 | INFO     | aborting loop
[2025-06-03 08:35:32] 2025-06-03 06:13:17,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:35:32] 2025-06-03 06:13:17,685 | INFO     | all job control threads have been joined
[2025-06-03 08:35:32] 2025-06-03 06:13:17,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:35:32] 2025-06-03 06:13:18,064 | INFO     | all payload control threads have been joined
[2025-06-03 08:35:32] 2025-06-03 06:13:18,301 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:35:32] 2025-06-03 06:13:18,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:35:32] 2025-06-03 06:13:18,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:35:32] 2025-06-03 06:13:18,343 | INFO     | all data control threads have been joined
[2025-06-03 08:35:32] 2025-06-03 06:13:18,663 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:18,664 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:18,691 | INFO     | [job] control thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:18,871 | INFO     | [job] validate thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:18,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:18,901 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:19,070 | INFO     | [payload] control thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:19,349 | INFO     | [data] control thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:19,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:35:32] 2025-06-03 06:13:19,634 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:19,666 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:19,691 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:19,853 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:20,015 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:20,107 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:20,395 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:21,713 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:35:32] 2025-06-03 06:13:23,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236493526848)>', '<ExcThread(monitor, started 140235874739968)>']
[2025-06-03 08:35:32] 2025-06-03 06:13:23,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:35:32] 2025-06-03 06:13:23,331 | INFO     | [monitor] control thread has ended
[2025-06-03 08:35:32] 2025-06-03 06:13:28,199 | INFO     | all workflow threads have been joined
[2025-06-03 08:35:32] 2025-06-03 06:13:28,199 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:35:32] 2025-06-03 06:13:28,199 | INFO     | traces error code: 0
[2025-06-03 08:35:32] 2025-06-03 06:13:28,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:35:32] 2025-06-03 06:13:28,535 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:35:32] 2025-06-03 06:13:28,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:35:32] 2025-06-03 06:13:28,748 [wrapper] pilotpid: 15484
[2025-06-03 08:35:32] 2025-06-03 06:13:28,848 [wrapper] Pilot exit status: 0
[2025-06-03 08:35:32] 2025-06-03 06:13:29,315 [wrapper] pandaids: 6677379097
[2025-06-03 08:35:32] 2025-06-03 06:13:30,046 [wrapper] cleanup supervisor_pilot 29026 15485
[2025-06-03 08:35:32] 2025-06-03 06:13:30,102 [wrapper] Test setup, not cleaning
[2025-06-03 08:35:32] 2025-06-03 06:13:30,222 [wrapper] apfmon messages muted
[2025-06-03 08:35:32] 2025-06-03 06:13:30,268 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:35:32] 2025-06-03 06:13:30,347 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:35:32]  *** Error codes and diagnostics ***
[2025-06-03 08:35:32]     "exeErrorCode": 0,
[2025-06-03 08:35:32]     "exeErrorDiag": "",
[2025-06-03 08:35:32]     "pilotErrorCode": 0,
[2025-06-03 08:35:32]     "pilotErrorDiag": "",
[2025-06-03 08:35:32]  *** Listing of results directory ***
[2025-06-03 08:35:32] total 390740
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 08:35:32] -rwx------. 1 boinc boinc     37140 Jun  2 17:50 runpilot2-wrapper.sh
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:35:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:54 run_atlas
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:54 job.xml
[2025-06-03 08:35:32] -rw-r--r--. 2 boinc boinc 216139002 Jun  3 00:54 EVNT.45006593._000061.pool.root.1
[2025-06-03 08:35:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:54 start_atlas.sh
[2025-06-03 08:35:32] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:54 shared
[2025-06-03 08:35:32] -rw-r--r--. 2 boinc boinc    508873 Jun  3 00:54 input.tar.gz
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc      6392 Jun  3 00:54 init_data.xml
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:54 boinc_lockfile
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc      2521 Jun  3 04:33 pandaJob.out
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc    988073 Jun  3 04:33 agis_schedconf.cvmfs.json
[2025-06-03 08:35:32] drwx------. 4 boinc boinc      4096 Jun  3 04:33 pilot3
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc 177113298 Jun  3 08:10 HITS.45006595._001517.pool.root.1
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc       531 Jun  3 08:10 boinc_task_state.xml
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc      1019 Jun  3 08:11 memory_monitor_summary.json
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc   1603667 Jun  3 08:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc    379260 Jun  3 08:11 log.45006595._001517.job.log.tgz.1
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc        95 Jun  3 08:13 pilot_heartbeat.json
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc      7688 Jun  3 08:13 heartbeat.json
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc      4416 Jun  3 08:13 pilotlog.txt
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc   1141826 Jun  3 08:13 log.45006595._001517.job.log.1
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc       357 Jun  3 08:13 output.list
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc       620 Jun  3 08:13 runtime_log
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc   1536000 Jun  3 08:13 result.tar.gz
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc      8659 Jun  3 08:13 runtime_log.err
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc       656 Jun  3 08:13 IKDLDmjbMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdaVKDmkEEqim.diag
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:35 boinc_mmap_file
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:35 wrapper_checkpoint.txt
[2025-06-03 08:35:32] -rw-r--r--. 1 boinc boinc     20515 Jun  3 08:35 stderr.txt
[2025-06-03 08:35:32] HITS file was successfully produced:
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc 177113298 Jun  3 08:10 shared/HITS.pool.root.1
[2025-06-03 08:35:32]  *** Contents of shared directory: ***
[2025-06-03 08:35:32] total 386056
[2025-06-03 08:35:32] -rw-r--r--. 2 boinc boinc 216139002 Jun  3 00:54 ATLAS.root_0
[2025-06-03 08:35:32] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:54 start_atlas.sh
[2025-06-03 08:35:32] -rw-r--r--. 2 boinc boinc    508873 Jun  3 00:54 input.tar.gz
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc 177113298 Jun  3 08:10 HITS.pool.root.1
[2025-06-03 08:35:32] -rw-------. 1 boinc boinc   1536000 Jun  3 08:13 result.tar.gz
08:35:34 (21814): run_atlas exited; CPU time 49238.823030
08:35:34 (21814): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN