Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:58:03 (17604): wrapper (7.7.26015): starting
22:58:03 (17604): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 22:58:03] Arguments: --nthreads 8
[2025-06-02 22:58:03] Threads: 8
[2025-06-02 22:58:03] Checking for CVMFS
[2025-06-02 22:58:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 22:58:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 22:58:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 22:58:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 22:58:07] 2.11.2.0 31392 30850 96576 146718 1 114 23131496 25165824 4353 130560 0 16049350 99.763 18766337 1992 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 22:58:07] CVMFS is ok
[2025-06-02 22:58:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 22:58:07] Checking for apptainer binary...
[2025-06-02 22:58:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 22:58:07] Running /usr/bin/apptainer --version
[2025-06-02 22:58:08] apptainer version 1.3.2-1.el7
[2025-06-02 22:58:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:58:19] cg-vwn267.simple-grid.lan
[2025-06-02 22:58:19] apptainer works
[2025-06-02 22:58:19] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:58:19] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:58:19] Starting ATLAS job with PandaID=6677377628
[2025-06-02 22:58:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:17:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:17:33] 2025-06-03 00:38:37,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:17:33] 2025-06-03 00:38:37,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:17:33] 2025-06-03 00:38:37,889 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:17:33] 2025-06-03 00:38:37,890 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,891 | INFO     | sum of deviations: -44750217746.999985
[2025-06-03 03:17:33] 2025-06-03 00:38:37,892 | INFO     | mean x: 1748904510.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,892 | INFO     | mean y: 2595893.730232558
[2025-06-03 03:17:33] 2025-06-03 00:38:37,892 | INFO     | -- intersect: 25399269771.38913
[2025-06-03 03:17:33] 2025-06-03 00:38:37,892 | INFO     | intersect: 25399269771.38913
[2025-06-03 03:17:33] 2025-06-03 00:38:37,892 | INFO     | chi2: 2.10450718530274
[2025-06-03 03:17:33] 2025-06-03 00:38:37,893 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 03:17:33] 2025-06-03 00:38:37,895 | INFO     | sum of deviations: -41832033684.00001
[2025-06-03 03:17:33] 2025-06-03 00:38:37,895 | INFO     | mean x: 1748904357.5
[2025-06-03 03:17:33] 2025-06-03 00:38:37,895 | INFO     | mean y: 2598012.8476190474
[2025-06-03 03:17:33] 2025-06-03 00:38:37,895 | INFO     | -- intersect: 25479615092.71522
[2025-06-03 03:17:33] 2025-06-03 00:38:37,895 | INFO     | intersect: 25479615092.71522
[2025-06-03 03:17:33] 2025-06-03 00:38:37,896 | INFO     | chi2: 2.1042123072345826
[2025-06-03 03:17:33] 2025-06-03 00:38:37,896 | INFO     | current chi2=2.1042123072345826 (change=0.014011739670782565 %)
[2025-06-03 03:17:33] 2025-06-03 00:38:37,896 | INFO     | right removable region: 209
[2025-06-03 03:17:33] 2025-06-03 00:38:37,896 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 03:17:33] 2025-06-03 00:38:37,898 | INFO     | sum of deviations: -87211015458.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,898 | INFO     | mean x: 1748904662.5
[2025-06-03 03:17:33] 2025-06-03 00:38:37,898 | INFO     | mean y: 2626485.3619047618
[2025-06-03 03:17:33] 2025-06-03 00:38:37,898 | INFO     | -- intersect: 53116872248.40799
[2025-06-03 03:17:33] 2025-06-03 00:38:37,899 | INFO     | intersect: 53116872248.40799
[2025-06-03 03:17:33] 2025-06-03 00:38:37,899 | INFO     | chi2: 0.21474458177087458
[2025-06-03 03:17:33] 2025-06-03 00:38:37,899 | INFO     | current chi2=0.21474458177087458 (change=89.79596823091944 %)
[2025-06-03 03:17:33] 2025-06-03 00:38:37,900 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,901 | INFO     | sum of deviations: -86607728995.99995
[2025-06-03 03:17:33] 2025-06-03 00:38:37,902 | INFO     | mean x: 1748904815.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,902 | INFO     | mean y: 2625996.5463414635
[2025-06-03 03:17:33] 2025-06-03 00:38:37,902 | INFO     | -- intersect: 56703943655.931335
[2025-06-03 03:17:33] 2025-06-03 00:38:37,902 | INFO     | intersect: 56703943655.931335
[2025-06-03 03:17:33] 2025-06-03 00:38:37,902 | INFO     | chi2: 0.1856918685976088
[2025-06-03 03:17:33] 2025-06-03 00:38:37,902 | INFO     | current chi2=0.1856918685976088 (change=13.528962143624215 %)
[2025-06-03 03:17:33] 2025-06-03 00:38:37,903 | INFO     | left removable region: 20
[2025-06-03 03:17:33] 2025-06-03 00:38:37,903 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,904 | INFO     | sum of deviations: -75371120540.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,905 | INFO     | mean x: 1748904937.0
[2025-06-03 03:17:33] 2025-06-03 00:38:37,905 | INFO     | mean y: 2623673.291005291
[2025-06-03 03:17:33] 2025-06-03 00:38:37,905 | INFO     | -- intersect: 62970565378.62967
[2025-06-03 03:17:33] 2025-06-03 00:38:37,905 | INFO     | intersect: 62970565378.62967
[2025-06-03 03:17:33] 2025-06-03 00:38:37,905 | INFO     | chi2: 0.16884627027359916
[2025-06-03 03:17:33] 2025-06-03 00:38:37,906 | INFO     | -- intersect: 62970565378.62967
[2025-06-03 03:17:33] 2025-06-03 00:38:37,906 | INFO     | current memory leak: -36.00 B/s (using 189 data points, chi2=0.17)
[2025-06-03 03:17:33] 2025-06-03 00:38:37,907 | INFO     | ..............................
[2025-06-03 03:17:33] 2025-06-03 00:38:37,907 | INFO     | . Timing measurements:
[2025-06-03 03:17:33] 2025-06-03 00:38:37,907 | INFO     | . get job = 0 s
[2025-06-03 03:17:33] 2025-06-03 00:38:37,907 | INFO     | . initial setup = 2 s
[2025-06-03 03:17:33] 2025-06-03 00:38:37,907 | INFO     | . payload setup = 13 s
[2025-06-03 03:17:33] 2025-06-03 00:38:37,908 | INFO     | . stage-in = 0 s
[2025-06-03 03:17:33] 2025-06-03 00:38:37,908 | INFO     | . payload execution = 13134 s
[2025-06-03 03:17:33] 2025-06-03 00:38:37,908 | INFO     | . stage-out = 2 s
[2025-06-03 03:17:33] 2025-06-03 00:38:37,908 | INFO     | . log creation = 0 s
[2025-06-03 03:17:33] 2025-06-03 00:38:37,908 | INFO     | ..............................
[2025-06-03 03:17:33] 2025-06-03 00:38:38,093 | INFO     | sufficient remaining disk space (497166581760 B)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,094 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,105 | INFO     | size of work directory /var/lib/boinc/slots/7/PanDA_Pilot-6677377628: 4052705 B (within 2537553920 B limit)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,108 | INFO     | pfn file=/var/lib/boinc/slots/7/PanDA_Pilot-6677377628/HITS.45006595._000700.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,108 | INFO     | total size of present files: 0 B (workdir size: 4052705 B)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,109 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/7/PanDA_Pilot-6677377628/HITS.45006595._000700.pool.root.1 since it does not exist
[2025-06-03 03:17:33] 2025-06-03 00:38:38,222 | INFO     | number of running child processes to parent process 30173: 1
[2025-06-03 03:17:33] 2025-06-03 00:38:38,222 | INFO     | maximum number of monitored processes: 6
[2025-06-03 03:17:33] 2025-06-03 00:38:38,222 | INFO     | aborting job monitoring since job object (job id=6677377628) has expired
[2025-06-03 03:17:33] 2025-06-03 00:38:38,523 | INFO     | 
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | job summary report
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | --------------------------------------------------
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | PanDA job id: 6677377628
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | task id: 45006595
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | errors: (none)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | pilot state: finished 
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | transexitcode: 0
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | exeerrorcode: 0
[2025-06-03 03:17:33] 2025-06-03 00:38:38,524 | INFO     | exeerrordiag: 
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | exitcode: 0
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | exitmsg: OK
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | cpuconsumptiontime: 49715 s
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | nevents: 400
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | neventsw: 0
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | pid: 30173
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | pgrp: 30173
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | corecount: 8
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | event service: False
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | sizes: {0: 2404945, 1: 2405200, 2: 2405200, 9: 2405434, 12: 2405462, 13152: 2435063, 13156: 2444004, 13157: 2444060, 13171: 2444230}
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | --------------------------------------------------
[2025-06-03 03:17:33] 2025-06-03 00:38:38,525 | INFO     | 
[2025-06-03 03:17:33] 2025-06-03 00:38:38,526 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 03:17:33] 2025-06-03 00:38:38,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:17:33] 2025-06-03 00:38:38,607 | INFO     | job 6677377628 has completed (purged errors)
[2025-06-03 03:17:33] 2025-06-03 00:38:38,608 | INFO     | overall cleanup function is called
[2025-06-03 03:17:33] 2025-06-03 00:38:39,616 | INFO     | --- collectZombieJob: --- 10, [30173]
[2025-06-03 03:17:33] 2025-06-03 00:38:39,616 | INFO     | zombie collector waiting for pid 30173
[2025-06-03 03:17:33] 2025-06-03 00:38:39,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:17:33] 2025-06-03 00:38:39,616 | INFO     | collected zombie processes
[2025-06-03 03:17:33] 2025-06-03 00:38:39,616 | INFO     | will attempt to kill all subprocesses of pid=30173
[2025-06-03 03:17:33] 2025-06-03 00:38:39,711 | INFO     | process IDs to be killed: [30173] (in reverse order)
[2025-06-03 03:17:33] 2025-06-03 00:38:39,819 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:17:33] 2025-06-03 00:38:39,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:17:33] 2025-06-03 00:38:39,823 | INFO     | did not find any defunct processes belonging to 30173
[2025-06-03 03:17:33] 2025-06-03 00:38:39,827 | INFO     | did not find any defunct processes belonging to 30173
[2025-06-03 03:17:33] 2025-06-03 00:38:39,827 | INFO     | ready for new job
[2025-06-03 03:17:33] 2025-06-03 00:38:39,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:17:33] 2025-06-03 00:38:39,829 | INFO     | **************************************
[2025-06-03 03:17:33] 2025-06-03 00:38:39,829 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:17:33] 2025-06-03 00:38:39,829 | INFO     | **************************************
[2025-06-03 03:17:33] 2025-06-03 00:38:39,829 | INFO     | 
[2025-06-03 03:17:33] 2025-06-03 00:38:39,830 | INFO     | pilot is running in a VM
[2025-06-03 03:17:33] 2025-06-03 00:38:39,830 | INFO     | architecture information:
[2025-06-03 03:17:33] 2025-06-03 00:38:39,830 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:17:33] 2025-06-03 00:38:39,879 | INFO     | cat /etc/os-release:
[2025-06-03 03:17:33] NAME="CentOS Linux"
[2025-06-03 03:17:33] VERSION="7 (Core)"
[2025-06-03 03:17:33] ID="centos"
[2025-06-03 03:17:33] ID_LIKE="rhel fedora"
[2025-06-03 03:17:33] VERSION_ID="7"
[2025-06-03 03:17:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:17:33] ANSI_COLOR="0;31"
[2025-06-03 03:17:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:17:33] HOME_URL="https://www.centos.org/"
[2025-06-03 03:17:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:17:33] 
[2025-06-03 03:17:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:17:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:17:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:17:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:17:33] 
[2025-06-03 03:17:33] 2025-06-03 00:38:39,879 | INFO     | **************************************
[2025-06-03 03:17:33] 2025-06-03 00:38:40,381 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 03:17:33] 2025-06-03 00:38:40,517 | INFO     | sufficient remaining disk space (497172873216 B)
[2025-06-03 03:17:33] 2025-06-03 00:38:40,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:17:33] 2025-06-03 00:38:40,517 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:17:33] 2025-06-03 00:38:40,517 | INFO     | update_server=False
[2025-06-03 03:17:33] 2025-06-03 00:38:40,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:17:33] 2025-06-03 00:38:40,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:17:33] 2025-06-03 00:38:40,727 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 03:17:33] 2025-06-03 00:38:40,727 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 03:17:33] 2025-06-03 00:38:40,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:17:33] 2025-06-03 00:38:40,728 | INFO     | will abort loop
[2025-06-03 03:17:33] 2025-06-03 00:38:40,788 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:17:33] 2025-06-03 00:38:40,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:17:33] 2025-06-03 00:38:40,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:17:33] 2025-06-03 00:38:40,854 | INFO     | all data control threads have been joined
[2025-06-03 03:17:33] 2025-06-03 00:38:41,028 | INFO     | all payload control threads have been joined
[2025-06-03 03:17:33] 2025-06-03 00:38:41,436 | INFO     | all job control threads have been joined
[2025-06-03 03:17:33] 2025-06-03 00:38:41,523 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:41,737 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:41,860 | INFO     | [data] control thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,034 | INFO     | [payload] control thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,434 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,442 | INFO     | [job] control thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,586 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,660 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,685 | INFO     | [job] validate thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,709 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,716 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,888 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:42,991 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:43,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:17:33] 2025-06-03 00:38:43,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:17:33] 2025-06-03 00:38:44,122 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:47,636 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:50,646 | INFO     | job.realtimelogging is not enabled
[2025-06-03 03:17:33] 2025-06-03 00:38:51,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:17:33] 2025-06-03 00:38:52,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097575225152)>', '<ExcThread(monitor, started 140096959391488)>']
[2025-06-03 03:17:33] 2025-06-03 00:38:52,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:17:33] 2025-06-03 00:38:52,860 | INFO     | [monitor] control thread has ended
[2025-06-03 03:17:33] 2025-06-03 00:38:57,445 | INFO     | all workflow threads have been joined
[2025-06-03 03:17:33] 2025-06-03 00:38:57,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:17:33] 2025-06-03 00:38:57,446 | INFO     | traces error code: 0
[2025-06-03 03:17:33] 2025-06-03 00:38:57,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:17:33] 2025-06-03 00:38:57,801 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:17:33] 2025-06-03 00:38:57,928 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:17:33] 2025-06-03 00:38:57,964 [wrapper] pilotpid: 23231
[2025-06-03 03:17:33] 2025-06-03 00:38:58,016 [wrapper] Pilot exit status: 0
[2025-06-03 03:17:33] 2025-06-03 00:38:58,463 [wrapper] pandaids: 6677377628
[2025-06-03 03:17:33] 2025-06-03 00:38:59,179 [wrapper] cleanup supervisor_pilot 28339 23232
[2025-06-03 03:17:33] 2025-06-03 00:38:59,197 [wrapper] Test setup, not cleaning
[2025-06-03 03:17:33] 2025-06-03 00:38:59,228 [wrapper] apfmon messages muted
[2025-06-03 03:17:33] 2025-06-03 00:38:59,242 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:17:33] 2025-06-03 00:38:59,261 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:17:33]  *** Error codes and diagnostics ***
[2025-06-03 03:17:33]     "exeErrorCode": 0,
[2025-06-03 03:17:33]     "exeErrorDiag": "",
[2025-06-03 03:17:33]     "pilotErrorCode": 0,
[2025-06-03 03:17:33]     "pilotErrorDiag": "",
[2025-06-03 03:17:33]  *** Listing of results directory ***
[2025-06-03 03:17:33] total 391840
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 03:17:33] -rwx------. 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc       100 Jun  2 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:17:33] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 22:58 run_atlas
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc       105 Jun  2 22:58 job.xml
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc      6391 Jun  2 22:58 init_data.xml
[2025-06-03 03:17:33] -rw-r--r--. 2 boinc boinc 215221897 Jun  2 22:58 EVNT.45006593._000028.pool.root.1
[2025-06-03 03:17:33] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:58 start_atlas.sh
[2025-06-03 03:17:33] drwxrwx--x. 2 boinc boinc        68 Jun  2 22:58 shared
[2025-06-03 03:17:33] -rw-r--r--. 2 boinc boinc    508872 Jun  2 22:58 input.tar.gz
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc         0 Jun  2 22:58 boinc_lockfile
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc      2519 Jun  2 22:58 pandaJob.out
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc    987975 Jun  2 22:58 agis_schedconf.cvmfs.json
[2025-06-03 03:17:33] drwx------. 4 boinc boinc      4096 Jun  2 22:58 pilot3
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc 179123770 Jun  3 02:37 HITS.45006595._000700.pool.root.1
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc        95 Jun  3 02:37 pilot_heartbeat.json
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:38 boinc_task_state.xml
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc      1019 Jun  3 02:38 memory_monitor_summary.json
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc   1603667 Jun  3 02:38 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc    392109 Jun  3 02:38 log.45006595._000700.job.log.tgz.1
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc      7689 Jun  3 02:38 heartbeat.json
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc      4674 Jun  3 02:38 pilotlog.txt
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc   1145414 Jun  3 02:38 log.45006595._000700.job.log.1
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc       357 Jun  3 02:39 output.list
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:39 runtime_log
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc   1556480 Jun  3 02:39 result.tar.gz
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc       656 Jun  3 02:39 VNsKDmxaMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi1eKDmoWeHWo.diag
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc      8659 Jun  3 02:39 runtime_log.err
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:17 boinc_mmap_file
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:17 wrapper_checkpoint.txt
[2025-06-03 03:17:33] -rw-r--r--. 1 boinc boinc     20911 Jun  3 03:17 stderr.txt
[2025-06-03 03:17:33] HITS file was successfully produced:
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc 179123770 Jun  3 02:37 shared/HITS.pool.root.1
[2025-06-03 03:17:33]  *** Contents of shared directory: ***
[2025-06-03 03:17:33] total 387144
[2025-06-03 03:17:33] -rw-r--r--. 2 boinc boinc 215221897 Jun  2 22:58 ATLAS.root_0
[2025-06-03 03:17:33] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:58 start_atlas.sh
[2025-06-03 03:17:33] -rw-r--r--. 2 boinc boinc    508872 Jun  2 22:58 input.tar.gz
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc 179123770 Jun  3 02:37 HITS.pool.root.1
[2025-06-03 03:17:33] -rw-------. 1 boinc boinc   1556480 Jun  3 02:39 result.tar.gz
03:17:35 (17604): run_atlas exited; CPU time 49882.996021
03:17:35 (17604): called boinc_finish(0)

</stderr_txt>
]]>

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