Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:22:34 (773351): wrapper (7.7.26015): starting
04:22:34 (773351): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 04:22:34] Arguments: --nthreads 3
[2025-06-04 04:22:34] Threads: 3
[2025-06-04 04:22:34] Checking for CVMFS
[2025-06-04 04:22:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:22:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:22:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:22:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:22:35] 2.12.7.0 68668 5423 47060 146763 0 55 5412215 10240001 0 130560 0 1867174 99.983 1231161 1283 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2025-06-04 04:22:35] CVMFS is ok
[2025-06-04 04:22:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:22:35] Checking for apptainer binary...
[2025-06-04 04:22:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:22:35] Running /usr/bin/apptainer --version
[2025-06-04 04:22:35] apptainer version 1.3.4
[2025-06-04 04:22:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:22:35] ahanlst03
[2025-06-04 04:22:35] apptainer works
[2025-06-04 04:22:35] Set ATHENA_PROC_NUMBER=3
[2025-06-04 04:22:35] Set ATHENA_CORE_NUMBER=3
[2025-06-04 04:22:35] Starting ATLAS job with PandaID=6677378353
[2025-06-04 04:22:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:09:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:09:47] 2025-06-04 07:09:32,147 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6677378353/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,149 | INFO     | extracted standard info from prmon json
[2025-06-04 09:09:47] 2025-06-04 07:09:32,149 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:09:47] 2025-06-04 07:09:32,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:09:47] 2025-06-04 07:09:32,150 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:09:47] 2025-06-04 07:09:32,150 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:09:47] 2025-06-04 07:09:32,156 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:09:47] 2025-06-04 07:09:32,156 | INFO     | sum of square deviations: 6953769450.5
[2025-06-04 09:09:47] 2025-06-04 07:09:32,159 | INFO     | sum of deviations: -60890306933.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,159 | INFO     | mean x: 1749012366.5
[2025-06-04 09:09:47] 2025-06-04 07:09:32,159 | INFO     | mean y: 2321972.475177305
[2025-06-04 09:09:47] 2025-06-04 07:09:32,159 | INFO     | -- intersect: 15317454374.246151
[2025-06-04 09:09:47] 2025-06-04 07:09:32,159 | INFO     | intersect: 15317454374.246151
[2025-06-04 09:09:47] 2025-06-04 07:09:32,160 | INFO     | chi2: 2.4257612778783257
[2025-06-04 09:09:47] 2025-06-04 07:09:32,160 | INFO     | sum of square deviations: 6590404498.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,163 | INFO     | sum of deviations: -43958351126.99999
[2025-06-04 09:09:47] 2025-06-04 07:09:32,163 | INFO     | mean x: 1749012214.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,163 | INFO     | mean y: 2328983.2671480146
[2025-06-04 09:09:47] 2025-06-04 07:09:32,163 | INFO     | -- intersect: 11668334165.76477
[2025-06-04 09:09:47] 2025-06-04 07:09:32,163 | INFO     | intersect: 11668334165.76477
[2025-06-04 09:09:47] 2025-06-04 07:09:32,164 | INFO     | chi2: 1.7786297960526463
[2025-06-04 09:09:47] 2025-06-04 07:09:32,164 | INFO     | current chi2=1.7786297960526463 (change=26.677459473328234 %)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,164 | INFO     | sum of square deviations: 6239923508.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,168 | INFO     | sum of deviations: -43105361348.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,168 | INFO     | mean x: 1749012061.5
[2025-06-04 09:09:47] 2025-06-04 07:09:32,168 | INFO     | mean y: 2329354.463235294
[2025-06-04 09:09:47] 2025-06-04 07:09:32,168 | INFO     | -- intersect: 12084496197.744339
[2025-06-04 09:09:47] 2025-06-04 07:09:32,168 | INFO     | intersect: 12084496197.744339
[2025-06-04 09:09:47] 2025-06-04 07:09:32,169 | INFO     | chi2: 1.7756430234190828
[2025-06-04 09:09:47] 2025-06-04 07:09:32,169 | INFO     | current chi2=1.7756430234190828 (change=0.16792548062514856 %)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,169 | INFO     | right removable region: 271
[2025-06-04 09:09:47] 2025-06-04 07:09:32,169 | INFO     | sum of square deviations: 6590404498.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,173 | INFO     | sum of deviations: -89548781288.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,173 | INFO     | mean x: 1749012519.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,173 | INFO     | mean y: 2333842.642599278
[2025-06-04 09:09:47] 2025-06-04 07:09:32,173 | INFO     | -- intersect: 23767482033.68842
[2025-06-04 09:09:47] 2025-06-04 07:09:32,173 | INFO     | intersect: 23767482033.68842
[2025-06-04 09:09:47] 2025-06-04 07:09:32,174 | INFO     | chi2: 1.1598683032171273
[2025-06-04 09:09:47] 2025-06-04 07:09:32,174 | INFO     | current chi2=1.1598683032171273 (change=52.18538964264457 %)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,174 | INFO     | sum of square deviations: 6239923508.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,177 | INFO     | sum of deviations: -75686365703.5
[2025-06-04 09:09:47] 2025-06-04 07:09:32,178 | INFO     | mean x: 1749012671.5
[2025-06-04 09:09:47] 2025-06-04 07:09:32,178 | INFO     | mean y: 2327803.7610294116
[2025-06-04 09:09:47] 2025-06-04 07:09:32,178 | INFO     | -- intersect: 21216756555.249584
[2025-06-04 09:09:47] 2025-06-04 07:09:32,178 | INFO     | intersect: 21216756555.249584
[2025-06-04 09:09:47] 2025-06-04 07:09:32,178 | INFO     | chi2: 1.1148600021185855
[2025-06-04 09:09:47] 2025-06-04 07:09:32,178 | INFO     | current chi2=1.1148600021185855 (change=3.8804665127672058 %)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,179 | INFO     | left removable region: 20
[2025-06-04 09:09:47] 2025-06-04 07:09:32,179 | INFO     | sum of square deviations: 4903347750.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,181 | INFO     | sum of deviations: -28691553740.000004
[2025-06-04 09:09:47] 2025-06-04 07:09:32,181 | INFO     | mean x: 1749012641.0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,181 | INFO     | mean y: 2321213.370517928
[2025-06-04 09:09:47] 2025-06-04 07:09:32,182 | INFO     | -- intersect: 10236531132.74465
[2025-06-04 09:09:47] 2025-06-04 07:09:32,182 | INFO     | intersect: 10236531132.74465
[2025-06-04 09:09:47] 2025-06-04 07:09:32,182 | INFO     | chi2: 0.29385336998583134
[2025-06-04 09:09:47] 2025-06-04 07:09:32,182 | INFO     | -- intersect: 10236531132.74465
[2025-06-04 09:09:47] 2025-06-04 07:09:32,182 | INFO     | current memory leak: -5.85 B/s (using 251 data points, chi2=0.29)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,183 | INFO     | ..............................
[2025-06-04 09:09:47] 2025-06-04 07:09:32,183 | INFO     | . Timing measurements:
[2025-06-04 09:09:47] 2025-06-04 07:09:32,183 | INFO     | . get job = 0 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,183 | INFO     | . initial setup = 1 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,183 | INFO     | . payload setup = 8 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,184 | INFO     | . stage-in = 0 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,184 | INFO     | . payload execution = 17153 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,184 | INFO     | . stage-out = 6 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,184 | INFO     | . log creation = 0 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,184 | INFO     | ..............................
[2025-06-04 09:09:47] 2025-06-04 07:09:32,305 | INFO     | 
[2025-06-04 09:09:47] 2025-06-04 07:09:32,305 | INFO     | job summary report
[2025-06-04 09:09:47] 2025-06-04 07:09:32,305 | INFO     | --------------------------------------------------
[2025-06-04 09:09:47] 2025-06-04 07:09:32,305 | INFO     | PanDA job id: 6677378353
[2025-06-04 09:09:47] 2025-06-04 07:09:32,305 | INFO     | task id: 45006595
[2025-06-04 09:09:47] 2025-06-04 07:09:32,305 | INFO     | errors: (none)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | pilot state: finished 
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | transexitcode: 0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | exeerrorcode: 0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | exeerrordiag: 
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | exitcode: 0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | exitmsg: OK
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | cpuconsumptiontime: 50823 s
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | nevents: 400
[2025-06-04 09:09:47] 2025-06-04 07:09:32,306 | INFO     | neventsw: 0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | pid: 783358
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | pgrp: 783358
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | corecount: 3
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | event service: False
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | sizes: {0: 2404956, 1: 2405211, 2: 2405211, 5: 2405445, 12: 2405501, 17166: 2437366, 17172: 2446321, 17175: 2446377, 17190: 2446547}
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | --------------------------------------------------
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | 
[2025-06-04 09:09:47] 2025-06-04 07:09:32,307 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 09:09:47] 2025-06-04 07:09:32,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:09:47] 2025-06-04 07:09:32,335 | INFO     | job 6677378353 has completed (purged errors)
[2025-06-04 09:09:47] 2025-06-04 07:09:32,336 | INFO     | overall cleanup function is called
[2025-06-04 09:09:47] 2025-06-04 07:09:32,736 | INFO     | PID=776938 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 09:09:47] 2025-06-04 07:09:33,344 | INFO     | --- collectZombieJob: --- 10, [783358]
[2025-06-04 09:09:47] 2025-06-04 07:09:33,344 | INFO     | zombie collector waiting for pid 783358
[2025-06-04 09:09:47] 2025-06-04 07:09:33,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:09:47] 2025-06-04 07:09:33,344 | INFO     | collected zombie processes
[2025-06-04 09:09:47] 2025-06-04 07:09:33,344 | INFO     | will attempt to kill all subprocesses of pid=783358
[2025-06-04 09:09:47] 2025-06-04 07:09:33,465 | INFO     | process IDs to be killed: [783358] (in reverse order)
[2025-06-04 09:09:47] 2025-06-04 07:09:33,510 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:09:47] 2025-06-04 07:09:33,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:09:47] 2025-06-04 07:09:33,514 | INFO     | did not find any defunct processes belonging to 783358
[2025-06-04 09:09:47] 2025-06-04 07:09:33,517 | INFO     | did not find any defunct processes belonging to 783358
[2025-06-04 09:09:47] 2025-06-04 07:09:33,517 | INFO     | ready for new job
[2025-06-04 09:09:47] 2025-06-04 07:09:33,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:09:47] 2025-06-04 07:09:33,520 | INFO     | **************************************
[2025-06-04 09:09:47] 2025-06-04 07:09:33,520 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:09:47] 2025-06-04 07:09:33,520 | INFO     | **************************************
[2025-06-04 09:09:47] 2025-06-04 07:09:33,520 | INFO     | 
[2025-06-04 09:09:47] 2025-06-04 07:09:33,521 | INFO     | architecture information:
[2025-06-04 09:09:47] 2025-06-04 07:09:33,521 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:09:47] 2025-06-04 07:09:33,542 | INFO     | cat /etc/os-release:
[2025-06-04 09:09:47] NAME="CentOS Linux"
[2025-06-04 09:09:47] VERSION="7 (Core)"
[2025-06-04 09:09:47] ID="centos"
[2025-06-04 09:09:47] ID_LIKE="rhel fedora"
[2025-06-04 09:09:47] VERSION_ID="7"
[2025-06-04 09:09:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:09:47] ANSI_COLOR="0;31"
[2025-06-04 09:09:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:09:47] HOME_URL="https://www.centos.org/"
[2025-06-04 09:09:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:09:47] 
[2025-06-04 09:09:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:09:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:09:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:09:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:09:47] 
[2025-06-04 09:09:47] 2025-06-04 07:09:33,543 | INFO     | **************************************
[2025-06-04 09:09:47] 2025-06-04 07:09:34,046 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 09:09:47] 2025-06-04 07:09:34,071 | INFO     | sufficient remaining disk space (34095497216 B)
[2025-06-04 09:09:47] 2025-06-04 07:09:34,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:09:47] 2025-06-04 07:09:34,072 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:09:47] 2025-06-04 07:09:34,072 | INFO     | update_server=False
[2025-06-04 09:09:47] 2025-06-04 07:09:34,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:09:47] 2025-06-04 07:09:34,073 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:09:47] 2025-06-04 07:09:34,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:09:47] 2025-06-04 07:09:34,405 | INFO     | aborting loop
[2025-06-04 09:09:47] 2025-06-04 07:09:34,665 | INFO     | all data control threads have been joined
[2025-06-04 09:09:47] 2025-06-04 07:09:34,743 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:09:47] 2025-06-04 07:09:34,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:09:47] 2025-06-04 07:09:34,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:09:47] 2025-06-04 07:09:34,990 | INFO     | all payload control threads have been joined
[2025-06-04 09:09:47] 2025-06-04 07:09:35,078 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,079 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,139 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,280 | INFO     | all job control threads have been joined
[2025-06-04 09:09:47] 2025-06-04 07:09:35,353 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:09:47] 2025-06-04 07:09:35,410 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,671 | INFO     | [data] control thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,786 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,957 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:35,996 | INFO     | [payload] control thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:36,126 | INFO     | [job] validate thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:36,285 | INFO     | [job] control thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:36,432 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:36,517 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:36,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:09:47] 2025-06-04 07:09:37,361 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:40,610 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:09:47] 2025-06-04 07:09:41,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124905810515776)>', '<ExcThread(monitor, started 124904896722688)>']
[2025-06-04 09:09:47] 2025-06-04 07:09:41,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:09:47] 2025-06-04 07:09:41,780 | INFO     | [monitor] control thread has ended
[2025-06-04 09:09:47] 2025-06-04 07:09:46,673 | INFO     | all workflow threads have been joined
[2025-06-04 09:09:47] 2025-06-04 07:09:46,674 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:09:47] 2025-06-04 07:09:46,675 | INFO     | traces error code: 0
[2025-06-04 09:09:47] 2025-06-04 07:09:46,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:09:47] 2025-06-04 07:09:46,869 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:09:47] 2025-06-04 07:09:46,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:09:47] 2025-06-04 07:09:46,876 [wrapper] pilotpid: 776938
[2025-06-04 09:09:47] 2025-06-04 07:09:46,880 [wrapper] Pilot exit status: 0
[2025-06-04 09:09:47] 2025-06-04 07:09:46,893 [wrapper] pandaids: 6677378353
[2025-06-04 09:09:47] 2025-06-04 07:09:46,921 [wrapper] cleanup supervisor_pilot  812272 776939
[2025-06-04 09:09:47] 2025-06-04 07:09:46,925 [wrapper] Test setup, not cleaning
[2025-06-04 09:09:47] 2025-06-04 07:09:46,928 [wrapper] apfmon messages muted
[2025-06-04 09:09:47] 2025-06-04 07:09:46,932 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:09:47] 2025-06-04 07:09:46,936 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:09:47]  *** Error codes and diagnostics ***
[2025-06-04 09:09:47]     "exeErrorCode": 0,
[2025-06-04 09:09:47]     "exeErrorDiag": "",
[2025-06-04 09:09:47]     "pilotErrorCode": 0,
[2025-06-04 09:09:47]     "pilotErrorDiag": "",
[2025-06-04 09:09:47]  *** Listing of results directory ***
[2025-06-04 09:09:47] total 390644
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 09:09:47] -rwx------ 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc       100 Jun  4 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:09:47] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 04:22 run_atlas
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc       105 Jun  4 04:22 job.xml
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc      9392 Jun  4 04:22 init_data.xml
[2025-06-04 09:09:47] -rw-r--r-- 2 boinc boinc 216456308 Jun  4 04:22 EVNT.45006593._000043.pool.root.1
[2025-06-04 09:09:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:22 start_atlas.sh
[2025-06-04 09:09:47] drwxrwx--x 2 boinc boinc      4096 Jun  4 04:22 shared
[2025-06-04 09:09:47] -rw-r--r-- 2 boinc boinc    508873 Jun  4 04:22 input.tar.gz
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc         0 Jun  4 04:22 boinc_lockfile
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc      2521 Jun  4 04:22 pandaJob.out
[2025-06-04 09:09:47] -rw------- 1 boinc boinc    986077 Jun  4 04:22 agis_schedconf.cvmfs.json
[2025-06-04 09:09:47] drwx------ 4 boinc boinc      4096 Jun  4 04:22 pilot3
[2025-06-04 09:09:47] -rw------- 1 boinc boinc        95 Jun  4 09:08 pilot_heartbeat.json
[2025-06-04 09:09:47] -rw------- 1 boinc boinc 175908259 Jun  4 09:08 HITS.45006595._001074.pool.root.1
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc       530 Jun  4 09:09 boinc_task_state.xml
[2025-06-04 09:09:47] -rw------- 1 boinc boinc      1013 Jun  4 09:09 memory_monitor_summary.json
[2025-06-04 09:09:47] -rw------- 1 boinc boinc   1603667 Jun  4 09:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:09:47] -rw------- 1 boinc boinc    352707 Jun  4 09:09 log.45006595._001074.job.log.tgz.1
[2025-06-04 09:09:47] -rw------- 1 boinc boinc      7664 Jun  4 09:09 heartbeat.json
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc      8192 Jun  4 09:09 boinc_mmap_file
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc        28 Jun  4 09:09 wrapper_checkpoint.txt
[2025-06-04 09:09:47] -rw------- 1 boinc boinc      4360 Jun  4 09:09 pilotlog.txt
[2025-06-04 09:09:47] -rw------- 1 boinc boinc   1554741 Jun  4 09:09 log.45006595._001074.job.log.1
[2025-06-04 09:09:47] -rw------- 1 boinc boinc       357 Jun  4 09:09 output.list
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc       620 Jun  4 09:09 runtime_log
[2025-06-04 09:09:47] -rw------- 1 boinc boinc   1925120 Jun  4 09:09 result.tar.gz
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc      8766 Jun  4 09:09 runtime_log.err
[2025-06-04 09:09:47] -rw------- 1 boinc boinc       652 Jun  4 09:09 rk4MDmtaMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXYVKDmnp1kPo.diag
[2025-06-04 09:09:47] -rw-r--r-- 1 boinc boinc     20642 Jun  4 09:09 stderr.txt
[2025-06-04 09:09:47] HITS file was successfully produced:
[2025-06-04 09:09:47] -rw------- 1 boinc boinc 175908259 Jun  4 09:08 shared/HITS.pool.root.1
[2025-06-04 09:09:47]  *** Contents of shared directory: ***
[2025-06-04 09:09:47] total 385576
[2025-06-04 09:09:47] -rw-r--r-- 2 boinc boinc 216456308 Jun  4 04:22 ATLAS.root_0
[2025-06-04 09:09:47] -rw-r--r-- 2 boinc boinc     15093 Jun  4 04:22 start_atlas.sh
[2025-06-04 09:09:47] -rw-r--r-- 2 boinc boinc    508873 Jun  4 04:22 input.tar.gz
[2025-06-04 09:09:47] -rw------- 1 boinc boinc 175908259 Jun  4 09:08 HITS.pool.root.1
[2025-06-04 09:09:47] -rw------- 1 boinc boinc   1925120 Jun  4 09:09 result.tar.gz
09:09:48 (773351): run_atlas exited; CPU time 50902.531637
09:09:48 (773351): called boinc_finish(0)

</stderr_txt>
]]>

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